RNA–Protein interactions for RNA: ENST00000533688.5

PDZD3-213, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-213ENST00000533688 JDP2Q8WYK2 163 aa21.66■■□□□ 1.06
PDZD3-213ENST00000533688 PSMD1Q99460 953 aa21.66■■□□□ 1.06
PDZD3-213ENST00000533688 IBTKQ9P2D0 1353 aaPredicted RBP21.65■■□□□ 1.06
PDZD3-213ENST00000533688 MAPK8IP3Q9UPT6 1336 aa21.65■■□□□ 1.06
PDZD3-213ENST00000533688 ITGBL1O95965 494 aaPredicted RBP21.65■■□□□ 1.06
PDZD3-213ENST00000533688 MAP1SQ66K74 1059 aaPredicted RBP21.65■■□□□ 1.06
PDZD3-213ENST00000533688 GPC2Q8N158 579 aa21.65■■□□□ 1.06
PDZD3-213ENST00000533688 PLEKHF1Q96S99 279 aa21.65■■□□□ 1.06
PDZD3-213ENST00000533688 RIC1Q4ADV7 1423 aa21.64■■□□□ 1.06
PDZD3-213ENST00000533688 TCERG1O14776 1098 aaKnown RBP21.64■■□□□ 1.05
PDZD3-213ENST00000533688 FOXN1O15353 648 aa21.64■■□□□ 1.05
PDZD3-213ENST00000533688 VEGFBP49765 207 aa21.64■■□□□ 1.05
PDZD3-213ENST00000533688 PNMA8AQ86V59 439 aaPredicted RBP21.64■■□□□ 1.05
PDZD3-213ENST00000533688 GJA3Q9Y6H8 435 aa21.64■■□□□ 1.05
PDZD3-213ENST00000533688 SUSD4Q5VX71 490 aa21.63■■□□□ 1.05
PDZD3-213ENST00000533688 PPEF1O14829 653 aaPredicted RBP21.62■■□□□ 1.05
PDZD3-213ENST00000533688 EIF6P56537 245 aaKnown RBP21.62■■□□□ 1.05
PDZD3-213ENST00000533688 CNTROBQ8N137 903 aa21.62■■□□□ 1.05
PDZD3-213ENST00000533688 AIDAQ96BJ3 306 aa21.62■■□□□ 1.05
PDZD3-213ENST00000533688 LTBP1Q14766 1721 aa21.61■■□□□ 1.05
PDZD3-213ENST00000533688 NTSR2O95665 410 aa21.61■■□□□ 1.05
PDZD3-213ENST00000533688 HOXA10P31260 410 aaPredicted RBP21.61■■□□□ 1.05
PDZD3-213ENST00000533688 CC2D2BQ6DHV5 1058 aa21.61■■□□□ 1.05
PDZD3-213ENST00000533688 C3orf67Q6ZVT6 689 aa21.61■■□□□ 1.05
PDZD3-213ENST00000533688 RBM17Q96I25 401 aaKnown RBP21.61■■□□□ 1.05
PDZD3-213ENST00000533688 LMOD1P29536 600 aaPredicted RBP21.6■■□□□ 1.05
PDZD3-213ENST00000533688 ZNF34Q8IZ26 560 aa21.6■■□□□ 1.05
PDZD3-213ENST00000533688 LARGE2Q8N3Y3 721 aa21.6■■□□□ 1.05
PDZD3-213ENST00000533688 TSPYL4Q9UJ04 414 aa21.6■■□□□ 1.05
PDZD3-213ENST00000533688 GIGYF2Q6Y7W6 1299 aaKnown RBP21.59■■□□□ 1.05
PDZD3-213ENST00000533688 ERBB4Q15303 1308 aa21.58■■□□□ 1.05
PDZD3-213ENST00000533688 ABT1Q9ULW3 272 aaKnown RBP21.58■■□□□ 1.05
PDZD3-213ENST00000533688 EIF2S2P20042 333 aaKnown RBP21.57■■□□□ 1.04
PDZD3-213ENST00000533688 SCNN1DP51172 638 aa21.57■■□□□ 1.04
PDZD3-213ENST00000533688 PPP1R42Q7Z4L9 355 aa21.57■■□□□ 1.04
PDZD3-213ENST00000533688 CRAMP1Q96RY5 1269 aa21.57■■□□□ 1.04
PDZD3-213ENST00000533688 PNNQ9H307 717 aaKnown RBP21.57■■□□□ 1.04
PDZD3-213ENST00000533688 RASSF10A6NK89 507 aa21.56■■□□□ 1.04
PDZD3-213ENST00000533688 ANXA1P04083 346 aa21.56■■□□□ 1.04
PDZD3-213ENST00000533688 CTCFP49711 727 aaPredicted RBP21.56■■□□□ 1.04
PDZD3-213ENST00000533688 GRIPAP1Q4V328 841 aa21.56■■□□□ 1.04
PDZD3-213ENST00000533688 PARP10Q53GL7 1025 aa21.56■■□□□ 1.04
PDZD3-213ENST00000533688 NIM1KQ8IY84 436 aa21.56■■□□□ 1.04
PDZD3-213ENST00000533688 PPIP5K2O43314 1243 aa21.55■■□□□ 1.04
PDZD3-213ENST00000533688 EPS15P42566 896 aa21.55■■□□□ 1.04
PDZD3-213ENST00000533688 AOC3Q16853 763 aa21.55■■□□□ 1.04
PDZD3-213ENST00000533688 PROSER3Q2NL68 480 aa21.55■■□□□ 1.04
PDZD3-213ENST00000533688 DEFB115Q30KQ5 88 aa21.55■■□□□ 1.04
PDZD3-213ENST00000533688 PDIA6Q15084 440 aa21.54■■□□□ 1.04
PDZD3-213ENST00000533688 NLRP3Q96P20 1036 aa21.54■■□□□ 1.04
PDZD3-213ENST00000533688 UTP14AQ9BVJ6 771 aaKnown RBP21.54■■□□□ 1.04
PDZD3-213ENST00000533688 TMX4Q9H1E5 349 aaPredicted RBP21.54■■□□□ 1.04
PDZD3-213ENST00000533688 PRDM10Q9NQV6 1147 aa21.54■■□□□ 1.04
PDZD3-213ENST00000533688 DDX21Q9NR30 783 aaKnown RBP eCLIP21.54■■□□□ 1.04
PDZD3-213ENST00000533688 RIPK4P57078 832 aa21.53■■□□□ 1.04
PDZD3-213ENST00000533688 FMR1Q06787 632 aaKnown RBP eCLIP21.53■■□□□ 1.04
PDZD3-213ENST00000533688 PAXIP1Q6ZW49 1069 aaPredicted RBP21.53■■□□□ 1.04
PDZD3-213ENST00000533688 LRP10Q7Z4F1 713 aa21.53■■□□□ 1.04
PDZD3-213ENST00000533688 NECTIN2Q92692 538 aa21.53■■□□□ 1.04
PDZD3-213ENST00000533688 WBP1LQ9NX94 342 aa21.53■■□□□ 1.04
PDZD3-213ENST00000533688 ABCC4O15439 1325 aa21.53■■□□□ 1.04
PDZD3-213ENST00000533688 WDR33Q9C0J8 1336 aaKnown RBP21.53■■□□□ 1.04
PDZD3-213ENST00000533688 LBX1P52954 281 aa21.52■■□□□ 1.04
PDZD3-213ENST00000533688 ATP6V0A2Q9Y487 856 aa21.52■■□□□ 1.04
PDZD3-213ENST00000533688 GRM1Q13255 1194 aa21.51■■□□□ 1.03
PDZD3-213ENST00000533688 ANKRD36CQ5JPF3 1778 aa21.51■■□□□ 1.03
PDZD3-213ENST00000533688 TRAF5O00463 557 aa21.5■■□□□ 1.03
PDZD3-213ENST00000533688 AIMP1Q12904 312 aaKnown RBP21.5■■□□□ 1.03
PDZD3-213ENST00000533688 USP50Q70EL3 339 aaPredicted RBP21.5■■□□□ 1.03
PDZD3-213ENST00000533688 LAMB2P55268 1798 aa21.49■■□□□ 1.03
PDZD3-213ENST00000533688 THSD7BQ9C0I4 1608 aa21.48■■□□□ 1.03
PDZD3-213ENST00000533688 HSPA8P11142 646 aaKnown RBP21.48■■□□□ 1.03
PDZD3-213ENST00000533688 HCLS1P14317 486 aaPredicted RBP21.48■■□□□ 1.03
PDZD3-213ENST00000533688 MAP2K1Q02750 393 aaPredicted RBP21.48■■□□□ 1.03
PDZD3-213ENST00000533688 SLC10A5Q5PT55 438 aa21.48■■□□□ 1.03
PDZD3-213ENST00000533688 DPP8Q6V1X1 898 aaPredicted RBP21.48■■□□□ 1.03
PDZD3-213ENST00000533688 XAGE3Q8WTP9 111 aa21.48■■□□□ 1.03
PDZD3-213ENST00000533688 ZNF428Q96B54 188 aa21.48■■□□□ 1.03
PDZD3-213ENST00000533688 GPRC5DQ9NZD1 345 aa21.48■■□□□ 1.03
PDZD3-213ENST00000533688 LMOD3Q0VAK6 560 aa21.47■■□□□ 1.03
PDZD3-213ENST00000533688 COPS6Q7L5N1 327 aa21.47■■□□□ 1.03
PDZD3-213ENST00000533688 NLRP10Q86W26 655 aa21.47■■□□□ 1.03
PDZD3-213ENST00000533688 SUPT20HQ8NEM7 779 aa21.47■■□□□ 1.03
PDZD3-213ENST00000533688 CAPNS2Q96L46 248 aa21.47■■□□□ 1.03
PDZD3-213ENST00000533688 TMPOP42166 694 aaKnown RBP21.46■■□□□ 1.03
PDZD3-213ENST00000533688 GMPSP49915 693 aaPredicted RBP21.46■■□□□ 1.03
PDZD3-213ENST00000533688 CXCL9Q07325 125 aa21.46■■□□□ 1.03
PDZD3-213ENST00000533688 HSP90AB3PQ58FF7 597 aa21.46■■□□□ 1.03
PDZD3-213ENST00000533688 ADARB2Q9NS39 739 aaKnown RBP21.46■■□□□ 1.03
PDZD3-213ENST00000533688 TRMT112Q9UI30 125 aaKnown RBP21.46■■□□□ 1.03
PDZD3-213ENST00000533688 ZNRF3Q9ULT6 936 aa21.46■■□□□ 1.03
PDZD3-213ENST00000533688 NEUROD2Q15784 382 aa21.45■■□□□ 1.02
PDZD3-213ENST00000533688 KRT24Q2M2I5 525 aa21.45■■□□□ 1.02
PDZD3-213ENST00000533688 CYP4F22Q6NT55 531 aa21.45■■□□□ 1.02
PDZD3-213ENST00000533688 CCDC146Q8IYE0 955 aa21.45■■□□□ 1.02
PDZD3-213ENST00000533688 RTFDC1Q9BY42 306 aaPredicted RBP21.45■■□□□ 1.02
PDZD3-213ENST00000533688 VPS33BQ9H267 617 aa21.45■■□□□ 1.02
PDZD3-213ENST00000533688 BABAM1Q9NWV8 329 aa21.45■■□□□ 1.02
PDZD3-213ENST00000533688 BBOX1O75936 387 aa21.44■■□□□ 1.02
PDZD3-213ENST00000533688 ECE1P42892 770 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms