RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 SCAND2PQ9GZW5 306 aaPredicted RBP14.58□□□□□ -0.08
RAD50-209ENST00000533482 BRMS1Q9HCU9 246 aa14.58□□□□□ -0.08
RAD50-209ENST00000533482 ZNF652Q9Y2D9 606 aa14.58□□□□□ -0.08
RAD50-209ENST00000533482 SERPINC1P01008 464 aa14.58□□□□□ -0.08
RAD50-209ENST00000533482 ATP6V1AP38606 617 aa14.58□□□□□ -0.08
RAD50-209ENST00000533482 NEK1Q96PY6 1258 aa14.58□□□□□ -0.08
RAD50-209ENST00000533482 DDX21Q9NR30 783 aaKnown RBP eCLIP14.58□□□□□ -0.08
RAD50-209ENST00000533482 DNM1Q05193 864 aaKnown RBP14.57□□□□□ -0.08
RAD50-209ENST00000533482 NMIQ13287 307 aaPredicted RBP14.57□□□□□ -0.08
RAD50-209ENST00000533482 CHAMP1Q96JM3 812 aa14.57□□□□□ -0.08
RAD50-209ENST00000533482 ZNF213O14771 459 aa14.57□□□□□ -0.08
RAD50-209ENST00000533482 ZSCAN22P10073 491 aaPredicted RBP14.57□□□□□ -0.08
RAD50-209ENST00000533482 CHST3Q7LGC8 479 aa14.57□□□□□ -0.08
RAD50-209ENST00000533482 SIRT1Q96EB6 747 aa14.57□□□□□ -0.08
RAD50-209ENST00000533482 DDB1Q16531 1140 aa14.57□□□□□ -0.08
RAD50-209ENST00000533482 MNS1Q8NEH6 495 aa14.57□□□□□ -0.08
RAD50-209ENST00000533482 ANKRD20A12PQ8NF67 263 aa14.57□□□□□ -0.08
RAD50-209ENST00000533482 RANBP6O60518 1105 aaKnown RBP14.56□□□□□ -0.08
RAD50-209ENST00000533482 POLR3DP05423 398 aaPredicted RBP14.56□□□□□ -0.08
RAD50-209ENST00000533482 SLC3A2P08195 630 aaKnown RBP14.56□□□□□ -0.08
RAD50-209ENST00000533482 TFCP2Q12800 502 aa14.56□□□□□ -0.08
RAD50-209ENST00000533482 CAVIN4Q5BKX8 364 aa14.56□□□□□ -0.08
RAD50-209ENST00000533482 ZSCAN29Q8IWY8 852 aaPredicted RBP14.56□□□□□ -0.08
RAD50-209ENST00000533482 JMYQ8N9B5 988 aa14.56□□□□□ -0.08
RAD50-209ENST00000533482 ADCY5O95622 1261 aa14.55□□□□□ -0.08
RAD50-209ENST00000533482 ANAPC15P60006 121 aa14.55□□□□□ -0.08
RAD50-209ENST00000533482 MAP3K12Q12852 859 aa14.55□□□□□ -0.08
RAD50-209ENST00000533482 C8orf76Q96K31 380 aa14.55□□□□□ -0.08
RAD50-209ENST00000533482 CEP57L1Q8IYX8 460 aa14.55□□□□□ -0.08
RAD50-209ENST00000533482 CTDP1Q9Y5B0 961 aaPredicted RBP14.55□□□□□ -0.08
RAD50-209ENST00000533482 BIN1O00499 593 aa14.55□□□□□ -0.08
RAD50-209ENST00000533482 HMGN5P82970 282 aaKnown RBP14.55□□□□□ -0.08
RAD50-209ENST00000533482 MICU3Q86XE3 530 aa14.55□□□□□ -0.08
RAD50-209ENST00000533482 ZNF771Q7L3S4 317 aaPredicted RBP14.55□□□□□ -0.08
RAD50-209ENST00000533482 USP16Q9Y5T5 823 aa14.55□□□□□ -0.08
RAD50-209ENST00000533482 ABCC4O15439 1325 aa14.54□□□□□ -0.08
RAD50-209ENST00000533482 GOLGA8BA8MQT2 603 aa14.54□□□□□ -0.08
RAD50-209ENST00000533482 LRSAM1Q6UWE0 723 aa14.54□□□□□ -0.08
RAD50-209ENST00000533482 ZNF594Q96JF6 807 aaPredicted RBP14.54□□□□□ -0.08
RAD50-209ENST00000533482 TEX13AQ9BXU3 409 aaPredicted RBP14.54□□□□□ -0.08
RAD50-209ENST00000533482 IPO7O95373 1038 aaKnown RBP14.54□□□□□ -0.08
RAD50-209ENST00000533482 SLC5A1P13866 664 aa14.54□□□□□ -0.08
RAD50-209ENST00000533482 UBE2HP62256 183 aa14.54□□□□□ -0.08
RAD50-209ENST00000533482 ATP2B3Q16720 1220 aa14.54□□□□□ -0.08
RAD50-209ENST00000533482 ISM2Q6H9L7 571 aa14.54□□□□□ -0.08
RAD50-209ENST00000533482 EIF4A1P60842 406 aaKnown RBP14.54□□□□□ -0.08
RAD50-209ENST00000533482 FAM173BQ6P4H8 233 aa14.54□□□□□ -0.08
RAD50-209ENST00000533482 PKP1Q13835 747 aa14.53□□□□□ -0.08
RAD50-209ENST00000533482 NIP7Q9Y221 180 aaKnown RBP eCLIP14.53□□□□□ -0.08
RAD50-209ENST00000533482 CD2BP2O95400 341 aaKnown RBP14.53□□□□□ -0.08
RAD50-209ENST00000533482 USP44Q9H0E7 712 aa14.53□□□□□ -0.08
RAD50-209ENST00000533482 KDM5AP29375 1690 aaKnown RBP14.53□□□□□ -0.08
RAD50-209ENST00000533482 IFIT3O14879 490 aaKnown RBP14.52□□□□□ -0.08
RAD50-209ENST00000533482 DZIP3Q86Y13 1208 aaKnown RBP14.52□□□□□ -0.08
RAD50-209ENST00000533482 NOC3LQ8WTT2 800 aaKnown RBP14.52□□□□□ -0.08
RAD50-209ENST00000533482 TCEAL9Q9UHQ7 104 aa14.52□□□□□ -0.08
RAD50-209ENST00000533482 FSIP1Q8NA03 581 aa14.52□□□□□ -0.08
RAD50-209ENST00000533482 WWC3Q9ULE0 1092 aa14.52□□□□□ -0.08
RAD50-209ENST00000533482 JAG2Q9Y219 1238 aa14.52□□□□□ -0.08
RAD50-209ENST00000533482 SIRT2Q8IXJ6 389 aa14.52□□□□□ -0.09
RAD50-209ENST00000533482 EDC3Q96F86 508 aaKnown RBP14.52□□□□□ -0.09
RAD50-209ENST00000533482 SLAIN2Q9P270 581 aa14.52□□□□□ -0.09
RAD50-209ENST00000533482 PRAMEF22A3QJZ6 481 aa14.52□□□□□ -0.09
RAD50-209ENST00000533482 SYT1P21579 422 aa14.52□□□□□ -0.09
RAD50-209ENST00000533482 USP5P45974 858 aa14.51□□□□□ -0.09
RAD50-209ENST00000533482 CREB3L3Q68CJ9 461 aa14.51□□□□□ -0.09
RAD50-209ENST00000533482 DZIP1Q86YF9 867 aaKnown RBP14.51□□□□□ -0.09
RAD50-209ENST00000533482 SUCLG2Q96I99 432 aa14.51□□□□□ -0.09
RAD50-209ENST00000533482 FAM227BQ96M60 508 aa14.51□□□□□ -0.09
RAD50-209ENST00000533482 C6orf229H3BNL8 230 aa14.51□□□□□ -0.09
RAD50-209ENST00000533482 ZNF165P49910 485 aa14.51□□□□□ -0.09
RAD50-209ENST00000533482 CCDC24Q8N4L8 307 aa14.51□□□□□ -0.09
RAD50-209ENST00000533482 CCDC112Q8NEF3 446 aa14.51□□□□□ -0.09
RAD50-209ENST00000533482 CCDC47Q96A33 483 aaKnown RBP14.51□□□□□ -0.09
RAD50-209ENST00000533482 ORC3Q9UBD5 711 aaPredicted RBP14.51□□□□□ -0.09
RAD50-209ENST00000533482 F13A1P00488 732 aa14.51□□□□□ -0.09
RAD50-209ENST00000533482 SLC9C2Q5TAH2 1124 aa14.51□□□□□ -0.09
RAD50-209ENST00000533482 CCDC129Q6ZRS4 1044 aa14.51□□□□□ -0.09
RAD50-209ENST00000533482 DBNDD2Q9BQY9 259 aa14.51□□□□□ -0.09
RAD50-209ENST00000533482 RRAGDQ9NQL2 400 aaPredicted RBP14.51□□□□□ -0.09
RAD50-209ENST00000533482 RTL1A6NKG5 1358 aa14.51□□□□□ -0.09
RAD50-209ENST00000533482 Q6ZUG5 572 aa14.5□□□□□ -0.09
RAD50-209ENST00000533482 TTC12Q9H892 705 aaPredicted RBP14.5□□□□□ -0.09
RAD50-209ENST00000533482 SLC52A2Q9HAB3 445 aa14.5□□□□□ -0.09
RAD50-209ENST00000533482 DACT1Q9NYF0 836 aa14.5□□□□□ -0.09
RAD50-209ENST00000533482 PALD1Q9ULE6 856 aa14.5□□□□□ -0.09
RAD50-209ENST00000533482 A0A0U1RQG5 324 aaPredicted RBP14.5□□□□□ -0.09
RAD50-209ENST00000533482 CDKL5O76039 1030 aa14.5□□□□□ -0.09
RAD50-209ENST00000533482 NBPF5PQ86XG9 351 aaPredicted RBP14.5□□□□□ -0.09
RAD50-209ENST00000533482 DNAJC10Q8IXB1 793 aa14.5□□□□□ -0.09
RAD50-209ENST00000533482 HMGB1P09429 215 aaKnown RBP14.5□□□□□ -0.09
RAD50-209ENST00000533482 IL15P40933 162 aaPredicted RBP14.5□□□□□ -0.09
RAD50-209ENST00000533482 PROSER3Q2NL68 480 aa14.5□□□□□ -0.09
RAD50-209ENST00000533482 MKNK2Q9HBH9 465 aa14.5□□□□□ -0.09
RAD50-209ENST00000533482 EFCAB6Q5THR3 1501 aa14.49□□□□□ -0.09
RAD50-209ENST00000533482 CFAP100Q494V2 611 aa14.49□□□□□ -0.09
RAD50-209ENST00000533482 GOLGA6L1Q8N7Z2 621 aa14.49□□□□□ -0.09
RAD50-209ENST00000533482 TRMT1Q9NXH9 659 aaKnown RBP14.49□□□□□ -0.09
RAD50-209ENST00000533482 MYOM2P54296 1465 aa14.49□□□□□ -0.09
RAD50-209ENST00000533482 IRS4O14654 1257 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms