RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CWC25Q9NXE8 425 aaPredicted RBP14.29□□□□□ -0.12
BDNF-218ENST00000533246 TRMT1Q9NXH9 659 aaKnown RBP14.29□□□□□ -0.12
BDNF-218ENST00000533246 FLT4P35916 1363 aa14.28□□□□□ -0.12
BDNF-218ENST00000533246 MSH6P52701 1360 aa14.28□□□□□ -0.12
BDNF-218ENST00000533246 ABCA5Q8WWZ7 1642 aa14.28□□□□□ -0.12
BDNF-218ENST00000533246 SNX21Q969T3 373 aa14.28□□□□□ -0.12
BDNF-218ENST00000533246 USP16Q9Y5T5 823 aa14.28□□□□□ -0.12
BDNF-218ENST00000533246 NPC1L1Q9UHC9 1359 aa14.28□□□□□ -0.12
BDNF-218ENST00000533246 CFAP100Q494V2 611 aa14.28□□□□□ -0.12
BDNF-218ENST00000533246 CCDC112Q8NEF3 446 aa14.28□□□□□ -0.12
BDNF-218ENST00000533246 HELBQ8NG08 1087 aaPredicted RBP14.28□□□□□ -0.12
BDNF-218ENST00000533246 AKAP2Q9Y2D5 859 aa14.28□□□□□ -0.12
BDNF-218ENST00000533246 ADCY5O95622 1261 aa14.28□□□□□ -0.12
BDNF-218ENST00000533246 LINS1Q8NG48 757 aa14.28□□□□□ -0.12
BDNF-218ENST00000533246 CEP89Q96ST8 783 aa14.28□□□□□ -0.12
BDNF-218ENST00000533246 RANBP6O60518 1105 aaKnown RBP14.27□□□□□ -0.12
BDNF-218ENST00000533246 AK2P54819 239 aa14.27□□□□□ -0.12
BDNF-218ENST00000533246 ZHX3Q9H4I2 956 aa14.27□□□□□ -0.12
BDNF-218ENST00000533246 TIMM10P62072 90 aa14.27□□□□□ -0.12
BDNF-218ENST00000533246 SKIDA1Q1XH10 827 aa14.27□□□□□ -0.12
BDNF-218ENST00000533246 AKAP4Q5JQC9 854 aa14.27□□□□□ -0.12
BDNF-218ENST00000533246 NMIQ13287 307 aaPredicted RBP14.27□□□□□ -0.13
BDNF-218ENST00000533246 DHX8Q14562 1220 aaKnown RBP14.27□□□□□ -0.13
BDNF-218ENST00000533246 FSIP1Q8NA03 581 aa14.27□□□□□ -0.13
BDNF-218ENST00000533246 ABCC1P33527 1531 aa14.26□□□□□ -0.13
BDNF-218ENST00000533246 RAB3GAP1Q15042 981 aa14.26□□□□□ -0.13
BDNF-218ENST00000533246 TMEM51Q9NW97 253 aa14.26□□□□□ -0.13
BDNF-218ENST00000533246 ORC3Q9UBD5 711 aaPredicted RBP14.26□□□□□ -0.13
BDNF-218ENST00000533246 ABCC2Q92887 1545 aa14.26□□□□□ -0.13
BDNF-218ENST00000533246 IFIT3O14879 490 aaKnown RBP14.26□□□□□ -0.13
BDNF-218ENST00000533246 KCNQ3O43525 872 aa14.26□□□□□ -0.13
BDNF-218ENST00000533246 ZSCAN22P10073 491 aaPredicted RBP14.26□□□□□ -0.13
BDNF-218ENST00000533246 LTKP29376 864 aa14.26□□□□□ -0.13
BDNF-218ENST00000533246 ZNF165P49910 485 aa14.26□□□□□ -0.13
BDNF-218ENST00000533246 HSP90AA4PQ58FG1 418 aa14.26□□□□□ -0.13
BDNF-218ENST00000533246 EXOC5O00471 708 aa14.25□□□□□ -0.13
BDNF-218ENST00000533246 SSBP05455 408 aaKnown RBP eCLIP14.25□□□□□ -0.13
BDNF-218ENST00000533246 GPS2Q13227 327 aa14.25□□□□□ -0.13
BDNF-218ENST00000533246 C16orf45Q96MC5 204 aaPredicted RBP14.25□□□□□ -0.13
BDNF-218ENST00000533246 SLC3A2P08195 630 aaKnown RBP14.25□□□□□ -0.13
BDNF-218ENST00000533246 ACSBG1Q96GR2 724 aa14.25□□□□□ -0.13
BDNF-218ENST00000533246 BICC1Q9H694 974 aaKnown RBP14.25□□□□□ -0.13
BDNF-218ENST00000533246 TTC12Q9H892 705 aaPredicted RBP14.25□□□□□ -0.13
BDNF-218ENST00000533246 TCEAL9Q9UHQ7 104 aa14.25□□□□□ -0.13
BDNF-218ENST00000533246 ANKRD18BA2A2Z9 1011 aa14.25□□□□□ -0.13
BDNF-218ENST00000533246 NBPF6Q5VWK0 638 aa14.25□□□□□ -0.13
BDNF-218ENST00000533246 NBPF4Q96M43 638 aa14.25□□□□□ -0.13
BDNF-218ENST00000533246 USP19O94966 1318 aa14.24□□□□□ -0.13
BDNF-218ENST00000533246 SOS1Q07889 1333 aaPredicted RBP14.24□□□□□ -0.13
BDNF-218ENST00000533246 CDKL5O76039 1030 aa14.24□□□□□ -0.13
BDNF-218ENST00000533246 FILIP1LQ4L180 1135 aa14.24□□□□□ -0.13
BDNF-218ENST00000533246 DACT1Q9NYF0 836 aa14.24□□□□□ -0.13
BDNF-218ENST00000533246 ZBTB12Q9Y330 459 aaPredicted RBP14.24□□□□□ -0.13
BDNF-218ENST00000533246 BLMP54132 1417 aaPredicted RBP14.24□□□□□ -0.13
BDNF-218ENST00000533246 UBE2HP62256 183 aa14.24□□□□□ -0.13
BDNF-218ENST00000533246 CADPS2Q86UW7 1296 aa14.24□□□□□ -0.13
BDNF-218ENST00000533246 ZCRB1Q8TBF4 217 aaKnown RBP14.24□□□□□ -0.13
BDNF-218ENST00000533246 ZMYM4Q5VZL5 1548 aa14.24□□□□□ -0.13
BDNF-218ENST00000533246 TXLNAP40222 546 aa14.23□□□□□ -0.13
BDNF-218ENST00000533246 MAP3K12Q12852 859 aa14.23□□□□□ -0.13
BDNF-218ENST00000533246 EDC3Q96F86 508 aaKnown RBP14.23□□□□□ -0.13
BDNF-218ENST00000533246 CTDP1Q9Y5B0 961 aaPredicted RBP14.23□□□□□ -0.13
BDNF-218ENST00000533246 USP5P45974 858 aa14.23□□□□□ -0.13
BDNF-218ENST00000533246 PPP1R1BQ9UD71 204 aaPredicted RBP14.23□□□□□ -0.13
BDNF-218ENST00000533246 SETQ01105 290 aaPredicted RBP14.23□□□□□ -0.13
BDNF-218ENST00000533246 TFCP2Q12800 502 aa14.23□□□□□ -0.13
BDNF-218ENST00000533246 CCDC129Q6ZRS4 1044 aa14.23□□□□□ -0.13
BDNF-218ENST00000533246 Q6ZUG5 572 aa14.22□□□□□ -0.13
BDNF-218ENST00000533246 SLC12A7Q9Y666 1083 aa14.22□□□□□ -0.13
BDNF-218ENST00000533246 CEP170Q5SW79 1584 aa14.22□□□□□ -0.13
BDNF-218ENST00000533246 KLF18A0A0U1RQI7 1052 aa14.22□□□□□ -0.13
BDNF-218ENST00000533246 ALDH1L1O75891 902 aa14.22□□□□□ -0.13
BDNF-218ENST00000533246 RBM5P52756 815 aaKnown RBP eCLIP14.22□□□□□ -0.13
BDNF-218ENST00000533246 TRMT2AQ8IZ69 625 aaKnown RBP14.22□□□□□ -0.13
BDNF-218ENST00000533246 CDK5RAP3Q96JB5 506 aa14.22□□□□□ -0.13
BDNF-218ENST00000533246 CLIP2Q9UDT6 1046 aa14.22□□□□□ -0.13
BDNF-218ENST00000533246 ZNF521Q96K83 1311 aa14.22□□□□□ -0.13
BDNF-218ENST00000533246 UGGT1Q9NYU2 1555 aa14.22□□□□□ -0.13
BDNF-218ENST00000533246 GSPT1P15170 499 aaKnown RBP14.22□□□□□ -0.13
BDNF-218ENST00000533246 ZSCAN29Q8IWY8 852 aaPredicted RBP14.22□□□□□ -0.13
BDNF-218ENST00000533246 IL17REQ8NFR9 667 aa14.22□□□□□ -0.13
BDNF-218ENST00000533246 CPLX3Q8WVH0 158 aa14.22□□□□□ -0.13
BDNF-218ENST00000533246 IP6K1Q92551 441 aa14.22□□□□□ -0.13
BDNF-218ENST00000533246 FAM227BQ96M60 508 aa14.22□□□□□ -0.13
BDNF-218ENST00000533246 ARGLU1Q9NWB6 273 aaPredicted RBP14.22□□□□□ -0.13
BDNF-218ENST00000533246 CWC15Q9P013 229 aaKnown RBP14.22□□□□□ -0.13
BDNF-218ENST00000533246 SBNO2Q9Y2G9 1366 aa14.21□□□□□ -0.13
BDNF-218ENST00000533246 RNMTO43148 476 aaKnown RBP14.21□□□□□ -0.13
BDNF-218ENST00000533246 SYT1P21579 422 aa14.21□□□□□ -0.13
BDNF-218ENST00000533246 PKP1Q13835 747 aa14.21□□□□□ -0.13
BDNF-218ENST00000533246 LRSAM1Q6UWE0 723 aa14.21□□□□□ -0.13
BDNF-218ENST00000533246 PPFIBP1Q86W92 1011 aa14.21□□□□□ -0.13
BDNF-218ENST00000533246 RXRAP19793 462 aa14.21□□□□□ -0.13
BDNF-218ENST00000533246 CCDC43Q96MW1 224 aaKnown RBP14.21□□□□□ -0.13
BDNF-218ENST00000533246 TBX22Q9Y458 520 aa14.21□□□□□ -0.13
BDNF-218ENST00000533246 MAP3K5Q99683 1374 aa14.21□□□□□ -0.14
BDNF-218ENST00000533246 GOLGA8AA7E2F4 631 aa14.21□□□□□ -0.14
BDNF-218ENST00000533246 GTF2F1P35269 517 aaKnown RBP eCLIP14.2□□□□□ -0.14
BDNF-218ENST00000533246 CREB3L3Q68CJ9 461 aa14.2□□□□□ -0.14
BDNF-218ENST00000533246 CCAR1Q8IX12 1150 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms