RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 AKAP4Q5JQC9 854 aa17.63■□□□□ 0.41
CAPN1-224ENST00000533129 CCDC30Q5VVM6 783 aa17.63■□□□□ 0.41
CAPN1-224ENST00000533129 PI4K2BQ8TCG2 481 aa17.63■□□□□ 0.41
CAPN1-224ENST00000533129 PLEKHG2Q9H7P9 1386 aa17.63■□□□□ 0.41
CAPN1-224ENST00000533129 MTMR6Q9Y217 621 aa17.62■□□□□ 0.41
CAPN1-224ENST00000533129 RASEFQ8IZ41 740 aa17.62■□□□□ 0.41
CAPN1-224ENST00000533129 DNM1Q05193 864 aaKnown RBP17.62■□□□□ 0.41
CAPN1-224ENST00000533129 TAF7Q15545 349 aaPredicted RBP17.62■□□□□ 0.41
CAPN1-224ENST00000533129 ZNF530Q6P9A1 599 aaPredicted RBP17.62■□□□□ 0.41
CAPN1-224ENST00000533129 IL1RAPL2Q9NP60 686 aa17.62■□□□□ 0.41
CAPN1-224ENST00000533129 OVOS2A0A0G2JMS6 1433 aa17.61■□□□□ 0.41
CAPN1-224ENST00000533129 CNTROBQ8N137 903 aa17.61■□□□□ 0.41
CAPN1-224ENST00000533129 FAM200AQ8TCP9 573 aa17.61■□□□□ 0.41
CAPN1-224ENST00000533129 SYCP1Q15431 976 aa17.61■□□□□ 0.41
CAPN1-224ENST00000533129 NUTM1Q86Y26 1132 aa17.61■□□□□ 0.41
CAPN1-224ENST00000533129 FEZ1Q99689 392 aa17.61■□□□□ 0.41
CAPN1-224ENST00000533129 HYPKQ9NX55 129 aa17.61■□□□□ 0.41
CAPN1-224ENST00000533129 GJB2P29033 226 aa17.6■□□□□ 0.41
CAPN1-224ENST00000533129 ZSCAN31Q96LW9 406 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-224ENST00000533129 USP44Q9H0E7 712 aa17.6■□□□□ 0.41
CAPN1-224ENST00000533129 SH2B1Q9NRF2 756 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-224ENST00000533129 UBTFL1P0CB47 393 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-224ENST00000533129 SPC24Q8NBT2 197 aa17.6■□□□□ 0.41
CAPN1-224ENST00000533129 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
CAPN1-224ENST00000533129 NLRP2Q9NX02 1062 aa17.59■□□□□ 0.41
CAPN1-224ENST00000533129 ABCA3Q99758 1704 aa17.59■□□□□ 0.41
CAPN1-224ENST00000533129 PDIA4P13667 645 aaKnown RBP17.59■□□□□ 0.41
CAPN1-224ENST00000533129 POLA2Q14181 598 aa17.59■□□□□ 0.41
CAPN1-224ENST00000533129 VPS53Q5VIR6 699 aa17.59■□□□□ 0.41
CAPN1-224ENST00000533129 LARGE1O95461 756 aa17.58■□□□□ 0.41
CAPN1-224ENST00000533129 CASTP20810 708 aaKnown RBP17.58■□□□□ 0.41
CAPN1-224ENST00000533129 CHRNA2Q15822 529 aa17.58■□□□□ 0.41
CAPN1-224ENST00000533129 RAPGEF4Q8WZA2 1011 aa17.58■□□□□ 0.41
CAPN1-224ENST00000533129 MAP4K4O95819 1239 aaPredicted RBP17.58■□□□□ 0.4
CAPN1-224ENST00000533129 CSB-PGBD3P0DP91 1061 aa17.58■□□□□ 0.4
CAPN1-224ENST00000533129 CCDC83Q8IWF9 413 aa17.58■□□□□ 0.4
CAPN1-224ENST00000533129 RHPN1Q8TCX5 695 aa17.58■□□□□ 0.4
CAPN1-224ENST00000533129 ELP1O95163 1332 aa17.57■□□□□ 0.4
CAPN1-224ENST00000533129 MAP3K11Q16584 847 aa17.57■□□□□ 0.4
CAPN1-224ENST00000533129 KIF1BPQ96EK5 621 aa17.57■□□□□ 0.4
CAPN1-224ENST00000533129 TM6SF1Q9BZW5 370 aa17.57■□□□□ 0.4
CAPN1-224ENST00000533129 CCDC171Q6TFL3 1326 aa17.57■□□□□ 0.4
CAPN1-224ENST00000533129 U2AF2P26368 475 aaKnown RBP eCLIP17.57■□□□□ 0.4
CAPN1-224ENST00000533129 LARP6Q9BRS8 491 aaKnown RBP17.57■□□□□ 0.4
CAPN1-224ENST00000533129 USP42Q9H9J4 1324 aaKnown RBP17.57■□□□□ 0.4
CAPN1-224ENST00000533129 SPDYE4A6NLX3 237 aa17.57■□□□□ 0.4
CAPN1-224ENST00000533129 SURF6O75683 361 aaKnown RBP17.57■□□□□ 0.4
CAPN1-224ENST00000533129 PTGS1P23219 599 aa17.57■□□□□ 0.4
CAPN1-224ENST00000533129 LTBP4Q8N2S1 1624 aa17.56■□□□□ 0.4
CAPN1-224ENST00000533129 TATP17735 454 aaPredicted RBP17.56■□□□□ 0.4
CAPN1-224ENST00000533129 NUP62CLQ9H1M0 184 aa17.56■□□□□ 0.4
CAPN1-224ENST00000533129 PRDM11Q9NQV5 511 aa17.56■□□□□ 0.4
CAPN1-224ENST00000533129 PDRG1Q9NUG6 133 aa17.56■□□□□ 0.4
CAPN1-224ENST00000533129 MRVI1Q9Y6F6 885 aa17.56■□□□□ 0.4
CAPN1-224ENST00000533129 SMTNL1A8MU46 457 aa17.56■□□□□ 0.4
CAPN1-224ENST00000533129 TYRO3Q06418 890 aa17.56■□□□□ 0.4
CAPN1-224ENST00000533129 NCBP1Q09161 790 aaKnown RBP17.56■□□□□ 0.4
CAPN1-224ENST00000533129 PPP1R42Q7Z4L9 355 aa17.56■□□□□ 0.4
CAPN1-224ENST00000533129 KCNB2Q92953 911 aa17.56■□□□□ 0.4
CAPN1-224ENST00000533129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.56■□□□□ 0.42e-6■■□□□ 11.9
CAPN1-224ENST00000533129 KRT85P78386 507 aa17.55■□□□□ 0.4
CAPN1-224ENST00000533129 TEFQ10587 303 aa17.55■□□□□ 0.4
CAPN1-224ENST00000533129 CWC27Q6UX04 472 aaKnown RBP17.55■□□□□ 0.4
CAPN1-224ENST00000533129 RUFY2Q8WXA3 655 aa17.55■□□□□ 0.4
CAPN1-224ENST00000533129 LGR6Q9HBX8 967 aa17.55■□□□□ 0.4
CAPN1-224ENST00000533129 ZSWIM6Q9HCJ5 1215 aa17.55■□□□□ 0.4
CAPN1-224ENST00000533129 OGFRQ9NZT2 677 aa17.55■□□□□ 0.4
CAPN1-224ENST00000533129 ADAMTS7Q9UKP4 1686 aa17.55■□□□□ 0.4
CAPN1-224ENST00000533129 RNMTO43148 476 aaKnown RBP17.55■□□□□ 0.4
CAPN1-224ENST00000533129 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.55■□□□□ 0.4
CAPN1-224ENST00000533129 CYP46A1Q9Y6A2 500 aa17.55■□□□□ 0.4
CAPN1-224ENST00000533129 KDM3BQ7LBC6 1761 aa17.54■□□□□ 0.4
CAPN1-224ENST00000533129 TTC41PQ6P2S7 1318 aa17.54■□□□□ 0.4
CAPN1-224ENST00000533129 VPS37CA5D8V6 355 aaPredicted RBP17.54■□□□□ 0.4
CAPN1-224ENST00000533129 CPA1P15085 419 aa17.54■□□□□ 0.4
CAPN1-224ENST00000533129 SPG7Q9UQ90 795 aa17.54■□□□□ 0.4
CAPN1-224ENST00000533129 TTC6Q86TZ1 520 aa17.54■□□□□ 0.4
CAPN1-224ENST00000533129 JAKMIP1Q96N16 626 aaKnown RBP17.54■□□□□ 0.4
CAPN1-224ENST00000533129 MEGF6O75095 1541 aa17.54■□□□□ 0.4
CAPN1-224ENST00000533129 ST3GAL1Q11201 340 aa17.53■□□□□ 0.4
CAPN1-224ENST00000533129 MPRIPQ6WCQ1 1025 aa17.53■□□□□ 0.4
CAPN1-224ENST00000533129 CCDC186Q7Z3E2 898 aa17.53■□□□□ 0.4
CAPN1-224ENST00000533129 AHDC1Q5TGY3 1603 aaPredicted RBP17.53■□□□□ 0.4
CAPN1-224ENST00000533129 ROBO1Q9Y6N7 1651 aa17.53■□□□□ 0.4
CAPN1-224ENST00000533129 GLRX3O76003 335 aaKnown RBP17.52■□□□□ 0.4
CAPN1-224ENST00000533129 HSP90AB4PQ58FF6 505 aa17.52■□□□□ 0.4
CAPN1-224ENST00000533129 PAXBP1Q9Y5B6 917 aa17.52■□□□□ 0.4
CAPN1-224ENST00000533129 WDR17Q8IZU2 1322 aa17.52■□□□□ 0.4
CAPN1-224ENST00000533129 RBM43Q6ZSC3 357 aaKnown RBP17.52■□□□□ 0.4
CAPN1-224ENST00000533129 LUZP1Q86V48 1076 aa17.52■□□□□ 0.4
CAPN1-224ENST00000533129 PLA2G4DQ86XP0 818 aa17.52■□□□□ 0.4
CAPN1-224ENST00000533129 COL5A2P05997 1499 aaPredicted RBP17.51■□□□□ 0.39
CAPN1-224ENST00000533129 ME3Q16798 604 aa17.51■□□□□ 0.39
CAPN1-224ENST00000533129 ADCK5Q3MIX3 580 aa17.51■□□□□ 0.39
CAPN1-224ENST00000533129 NECTIN2Q92692 538 aa17.51■□□□□ 0.39
CAPN1-224ENST00000533129 CBX8Q9HC52 389 aa17.51■□□□□ 0.39
CAPN1-224ENST00000533129 SRGAP3O43295 1099 aa17.51■□□□□ 0.39
CAPN1-224ENST00000533129 HOXB7P09629 217 aa17.51■□□□□ 0.39
CAPN1-224ENST00000533129 LIG1P18858 919 aa17.51■□□□□ 0.39
CAPN1-224ENST00000533129 PDCP20941 246 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms