RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 LBX1P52954 281 aa15.31■□□□□ 0.04
CMTM1-216ENST00000533078 DCTN1Q14203 1278 aa15.31■□□□□ 0.04
CMTM1-216ENST00000533078 HLFQ16534 295 aa15.31■□□□□ 0.04
CMTM1-216ENST00000533078 LARGE2Q8N3Y3 721 aa15.31■□□□□ 0.04
CMTM1-216ENST00000533078 RBM17Q96I25 401 aaKnown RBP15.31■□□□□ 0.04
CMTM1-216ENST00000533078 LAMB4A4D0S4 1761 aa15.31■□□□□ 0.04
CMTM1-216ENST00000533078 ECE1P42892 770 aa15.3■□□□□ 0.04
CMTM1-216ENST00000533078 CRY2Q49AN0 593 aa15.3■□□□□ 0.04
CMTM1-216ENST00000533078 MAP3K15Q6ZN16 1313 aa15.3■□□□□ 0.04
CMTM1-216ENST00000533078 WDR33Q9C0J8 1336 aaKnown RBP15.3■□□□□ 0.04
CMTM1-216ENST00000533078 NUTM1Q86Y26 1132 aa15.29■□□□□ 0.04
CMTM1-216ENST00000533078 NIM1KQ8IY84 436 aa15.29■□□□□ 0.04
CMTM1-216ENST00000533078 DDX21Q9NR30 783 aaKnown RBP eCLIP15.29■□□□□ 0.04
CMTM1-216ENST00000533078 RRP7AQ9Y3A4 280 aaKnown RBP15.29■□□□□ 0.04
CMTM1-216ENST00000533078 ADAMTSL1Q8N6G6 1762 aa15.29■□□□□ 0.04
CMTM1-216ENST00000533078 IBTKQ9P2D0 1353 aaPredicted RBP15.28■□□□□ 0.04
CMTM1-216ENST00000533078 PPEF1O14829 653 aaPredicted RBP15.28■□□□□ 0.04
CMTM1-216ENST00000533078 PPP2R1AP30153 589 aa15.28■□□□□ 0.04
CMTM1-216ENST00000533078 USP50Q70EL3 339 aaPredicted RBP15.28■□□□□ 0.04
CMTM1-216ENST00000533078 PPP1R42Q7Z4L9 355 aa15.28■□□□□ 0.04
CMTM1-216ENST00000533078 MIS18AQ9NYP9 233 aa15.28■□□□□ 0.04
CMTM1-216ENST00000533078 ABCC12Q96J65 1359 aa15.27■□□□□ 0.04
CMTM1-216ENST00000533078 MYL6BP14649 208 aa15.27■□□□□ 0.04
CMTM1-216ENST00000533078 GPTP24298 496 aa15.27■□□□□ 0.04
CMTM1-216ENST00000533078 HOXA10P31260 410 aaPredicted RBP15.27■□□□□ 0.04
CMTM1-216ENST00000533078 PNNQ9H307 717 aaKnown RBP15.27■□□□□ 0.04
CMTM1-216ENST00000533078 NUP98P52948 1817 aa15.27■□□□□ 0.03
CMTM1-216ENST00000533078 RIC1Q4ADV7 1423 aa15.26■□□□□ 0.03
CMTM1-216ENST00000533078 HSPA8P11142 646 aaKnown RBP15.26■□□□□ 0.03
CMTM1-216ENST00000533078 GRM1Q13255 1194 aa15.26■□□□□ 0.03
CMTM1-216ENST00000533078 NLRP3Q96P20 1036 aa15.26■□□□□ 0.03
CMTM1-216ENST00000533078 CRAMP1Q96RY5 1269 aa15.26■□□□□ 0.03
CMTM1-216ENST00000533078 ZBTB3Q9H5J0 574 aa15.26■□□□□ 0.03
CMTM1-216ENST00000533078 MAPK8IP3Q9UPT6 1336 aa15.25■□□□□ 0.03
CMTM1-216ENST00000533078 TCERG1O14776 1098 aaKnown RBP15.25■□□□□ 0.03
CMTM1-216ENST00000533078 PPIP5K2O43314 1243 aa15.25■□□□□ 0.03
CMTM1-216ENST00000533078 PARP10Q53GL7 1025 aa15.25■□□□□ 0.03
CMTM1-216ENST00000533078 SUPT20HQ8NEM7 779 aa15.25■□□□□ 0.03
CMTM1-216ENST00000533078 CAPNS2Q96L46 248 aa15.25■□□□□ 0.03
CMTM1-216ENST00000533078 VPS33BQ9H267 617 aa15.25■□□□□ 0.03
CMTM1-216ENST00000533078 ERBB4Q15303 1308 aa15.24■□□□□ 0.03
CMTM1-216ENST00000533078 SCNN1DP51172 638 aa15.24■□□□□ 0.03
CMTM1-216ENST00000533078 TTLL7Q6ZT98 887 aa15.24■□□□□ 0.03
CMTM1-216ENST00000533078 GPR101Q96P66 508 aaPredicted RBP15.24■□□□□ 0.03
CMTM1-216ENST00000533078 EPS15P42566 896 aa15.23■□□□□ 0.03
CMTM1-216ENST00000533078 EIF4A1P60842 406 aaKnown RBP15.23■□□□□ 0.03
CMTM1-216ENST00000533078 SUSD4Q5VX71 490 aa15.23■□□□□ 0.03
CMTM1-216ENST00000533078 ABHD8Q96I13 439 aa15.23■□□□□ 0.03
CMTM1-216ENST00000533078 ADARB2Q9NS39 739 aaKnown RBP15.23■□□□□ 0.03
CMTM1-216ENST00000533078 SNED1Q8TER0 1413 aa15.23■□□□□ 0.03
CMTM1-216ENST00000533078 TRPM7Q96QT4 1865 aa15.23■□□□□ 0.03
CMTM1-216ENST00000533078 UBN2Q6ZU65 1347 aa15.22■□□□□ 0.03
CMTM1-216ENST00000533078 KDM3BQ7LBC6 1761 aa15.22■□□□□ 0.03
CMTM1-216ENST00000533078 GIGYF2Q6Y7W6 1299 aaKnown RBP15.22■□□□□ 0.03
CMTM1-216ENST00000533078 NTSR2O95665 410 aa15.21■□□□□ 0.03
CMTM1-216ENST00000533078 NFE2L2Q16236 605 aa15.21■□□□□ 0.03
CMTM1-216ENST00000533078 AOC3Q16853 763 aa15.21■□□□□ 0.03
CMTM1-216ENST00000533078 CYP4F22Q6NT55 531 aa15.21■□□□□ 0.03
CMTM1-216ENST00000533078 ZNF34Q8IZ26 560 aa15.21■□□□□ 0.03
CMTM1-216ENST00000533078 UTP14AQ9BVJ6 771 aaKnown RBP15.21■□□□□ 0.03
CMTM1-216ENST00000533078 ATP6V0A2Q9Y487 856 aa15.21■□□□□ 0.03
CMTM1-216ENST00000533078 DLG5Q8TDM6 1919 aa15.2■□□□□ 0.02
CMTM1-216ENST00000533078 CA12O43570 354 aa15.2■□□□□ 0.02
CMTM1-216ENST00000533078 MAP2K2P36507 400 aa15.2■□□□□ 0.02
CMTM1-216ENST00000533078 HSP90AB3PQ58FF7 597 aa15.2■□□□□ 0.02
CMTM1-216ENST00000533078 DPP8Q6V1X1 898 aaPredicted RBP15.2■□□□□ 0.02
CMTM1-216ENST00000533078 BCL2L13Q9BXK5 485 aa15.2■□□□□ 0.02
CMTM1-216ENST00000533078 GPRC5DQ9NZD1 345 aa15.2■□□□□ 0.02
CMTM1-216ENST00000533078 TSPYL4Q9UJ04 414 aa15.2■□□□□ 0.02
CMTM1-216ENST00000533078 ZNRF3Q9ULT6 936 aa15.2■□□□□ 0.02
CMTM1-216ENST00000533078 TLL2Q9Y6L7 1015 aa15.2■□□□□ 0.02
CMTM1-216ENST00000533078 CDHR2Q9BYE9 1310 aa15.19■□□□□ 0.02
CMTM1-216ENST00000533078 CCDC85CA6NKD9 419 aa15.19■□□□□ 0.02
CMTM1-216ENST00000533078 TRAF5O00463 557 aa15.19■□□□□ 0.02
CMTM1-216ENST00000533078 BBOX1O75936 387 aa15.19■□□□□ 0.02
CMTM1-216ENST00000533078 TNIP1Q15025 636 aa15.19■□□□□ 0.02
CMTM1-216ENST00000533078 LTBP1Q14766 1721 aa15.19■□□□□ 0.02
CMTM1-216ENST00000533078 COL4A5P29400 1685 aa15.19■□□□□ 0.02
CMTM1-216ENST00000533078 THSD7BQ9C0I4 1608 aa15.18■□□□□ 0.02
CMTM1-216ENST00000533078 CELF2O95319 508 aaKnown RBP15.18■□□□□ 0.02
CMTM1-216ENST00000533078 EIF2S2P20042 333 aaKnown RBP15.18■□□□□ 0.02
CMTM1-216ENST00000533078 FAM161AQ3B820 660 aa15.18■□□□□ 0.02
CMTM1-216ENST00000533078 CIAPIN1Q6FI81 312 aa15.18■□□□□ 0.02
CMTM1-216ENST00000533078 DDX46Q7L014 1031 aaKnown RBP15.18■□□□□ 0.02
CMTM1-216ENST00000533078 ABCC4O15439 1325 aa15.17■□□□□ 0.02
CMTM1-216ENST00000533078 GMPSP49915 693 aaPredicted RBP15.17■□□□□ 0.02
CMTM1-216ENST00000533078 CST9Q5W186 159 aa15.17■□□□□ 0.02
CMTM1-216ENST00000533078 MPNDQ8N594 471 aa15.17■□□□□ 0.02
CMTM1-216ENST00000533078 ZC3H15Q8WU90 426 aaKnown RBP15.17■□□□□ 0.02
CMTM1-216ENST00000533078 THUMPD2Q9BTF0 503 aaKnown RBP15.17■□□□□ 0.02
CMTM1-216ENST00000533078 MLLT1Q03111 559 aaPredicted RBP15.16■□□□□ 0.02
CMTM1-216ENST00000533078 FMR1Q06787 632 aaKnown RBP eCLIP15.16■□□□□ 0.02
CMTM1-216ENST00000533078 CXCL9Q07325 125 aa15.16■□□□□ 0.02
CMTM1-216ENST00000533078 LMOD3Q0VAK6 560 aa15.16■□□□□ 0.02
CMTM1-216ENST00000533078 SLC10A5Q5PT55 438 aa15.16■□□□□ 0.02
CMTM1-216ENST00000533078 TMC4Q7Z404 712 aa15.16■□□□□ 0.02
CMTM1-216ENST00000533078 SP8Q8IXZ3 490 aa15.16■□□□□ 0.02
CMTM1-216ENST00000533078 HHIPL1Q96JK4 782 aa15.16■□□□□ 0.02
CMTM1-216ENST00000533078 CFAP44Q96MT7 982 aa15.16■□□□□ 0.02
CMTM1-216ENST00000533078 RTFDC1Q9BY42 306 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms