RNA–Protein interactions for RNA: ENST00000531375.1

SHARPIN-205, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-205ENST00000531375 DDX21Q9NR30 783 aaKnown RBP eCLIP33.85■■■■□ 3.01
SHARPIN-205ENST00000531375 SNED1Q8TER0 1413 aa33.84■■■■□ 3.01
SHARPIN-205ENST00000531375 XAGE3Q8WTP9 111 aa33.83■■■■□ 3.01
SHARPIN-205ENST00000531375 RPGRQ92834 1020 aaKnown RBP33.83■■■■□ 3.01
SHARPIN-205ENST00000531375 CFAP44Q96MT7 982 aa33.83■■■■□ 3.01
SHARPIN-205ENST00000531375 DDNO94850 711 aaPredicted RBP33.82■■■■□ 3
SHARPIN-205ENST00000531375 HOXB7P09629 217 aa33.82■■■■□ 3
SHARPIN-205ENST00000531375 ZNF277Q9NRM2 450 aaPredicted RBP33.82■■■■□ 3
SHARPIN-205ENST00000531375 AIMP1Q12904 312 aaKnown RBP33.81■■■■□ 3
SHARPIN-205ENST00000531375 SLC10A5Q5PT55 438 aa33.81■■■■□ 3
SHARPIN-205ENST00000531375 UTP14AQ9BVJ6 771 aaKnown RBP33.81■■■■□ 3
SHARPIN-205ENST00000531375 CRAMP1Q96RY5 1269 aa33.8■■■■□ 3
SHARPIN-205ENST00000531375 HSP90AB3PQ58FF7 597 aa33.79■■■■□ 3
SHARPIN-205ENST00000531375 CC2D2BQ6DHV5 1058 aa33.79■■■■□ 3
SHARPIN-205ENST00000531375 C3orf67Q6ZVT6 689 aa33.79■■■■□ 3
SHARPIN-205ENST00000531375 SYNE4Q8N205 404 aa33.79■■■■□ 3
SHARPIN-205ENST00000531375 RBM17Q96I25 401 aaKnown RBP33.79■■■■□ 3
SHARPIN-205ENST00000531375 APAF1O14727 1248 aa33.78■■■■□ 3
SHARPIN-205ENST00000531375 HTRA3P83110 453 aa33.78■■■■□ 3
SHARPIN-205ENST00000531375 PSMD1Q99460 953 aa33.78■■■■□ 3
SHARPIN-205ENST00000531375 CHPF2Q9P2E5 772 aa33.78■■■■□ 3
SHARPIN-205ENST00000531375 RNF123Q5XPI4 1314 aa33.78■■■■□ 3
SHARPIN-205ENST00000531375 SCN4AP35499 1836 aa33.77■■■■□ 3
SHARPIN-205ENST00000531375 ZNF853P0CG23 659 aa33.77■■■■□ 3
SHARPIN-205ENST00000531375 TCIRG1Q13488 830 aa33.77■■■■□ 3
SHARPIN-205ENST00000531375 HDGFL1Q5TGJ6 251 aa33.77■■■■□ 3
SHARPIN-205ENST00000531375 NLRP3Q96P20 1036 aa33.77■■■■□ 3
SHARPIN-205ENST00000531375 LAMB2P55268 1798 aa33.76■■■■□ 3
SHARPIN-205ENST00000531375 IARSP41252 1262 aaKnown RBP33.76■■■□□ 2.99
SHARPIN-205ENST00000531375 NLRP10Q86W26 655 aa33.76■■■□□ 2.99
SHARPIN-205ENST00000531375 MBIPQ9NS73 344 aa33.76■■■□□ 2.99
SHARPIN-205ENST00000531375 L3MBTL3Q96JM7 780 aaPredicted RBP33.75■■■□□ 2.99
SHARPIN-205ENST00000531375 GRIPAP1Q4V328 841 aa33.74■■■□□ 2.99
SHARPIN-205ENST00000531375 DUSP27Q5VZP5 1158 aa33.74■■■□□ 2.99
SHARPIN-205ENST00000531375 DBF4Q9UBU7 674 aaPredicted RBP33.74■■■□□ 2.99
SHARPIN-205ENST00000531375 FZD9O00144 591 aa33.72■■■□□ 2.99
SHARPIN-205ENST00000531375 ZNF541Q9H0D2 1346 aa33.72■■■□□ 2.99
SHARPIN-205ENST00000531375 PPEF1O14829 653 aaPredicted RBP33.71■■■□□ 2.99
SHARPIN-205ENST00000531375 PLBD2Q8NHP8 589 aa33.71■■■□□ 2.99
SHARPIN-205ENST00000531375 KLRG1Q96E93 195 aa33.71■■■□□ 2.99
SHARPIN-205ENST00000531375 IFT57Q9NWB7 429 aa33.71■■■□□ 2.99
SHARPIN-205ENST00000531375 IQCA1LA6NCM1 817 aa33.7■■■□□ 2.99
SHARPIN-205ENST00000531375 CALD1Q05682 793 aaKnown RBP33.69■■■□□ 2.98
SHARPIN-205ENST00000531375 ANKRD13DQ6ZTN6 518 aa33.69■■■□□ 2.98
SHARPIN-205ENST00000531375 GNAI1P63096 354 aa33.68■■■□□ 2.98
SHARPIN-205ENST00000531375 SLC51AQ86UW1 340 aa33.68■■■□□ 2.98
SHARPIN-205ENST00000531375 HYPKQ9NX55 129 aa33.68■■■□□ 2.98
SHARPIN-205ENST00000531375 TRMT112Q9UI30 125 aaKnown RBP33.68■■■□□ 2.98
SHARPIN-205ENST00000531375 POTEIP0CG38 1075 aa33.67■■■□□ 2.98
SHARPIN-205ENST00000531375 POTEJP0CG39 1038 aa33.67■■■□□ 2.98
SHARPIN-205ENST00000531375 ZEB1P37275 1124 aaPredicted RBP33.67■■■□□ 2.98
SHARPIN-205ENST00000531375 CHADLQ6NUI6 762 aa33.67■■■□□ 2.98
SHARPIN-205ENST00000531375 SH3TC1Q8TE82 1336 aa33.67■■■□□ 2.98
SHARPIN-205ENST00000531375 COL4A5P29400 1685 aa33.67■■■□□ 2.98
SHARPIN-205ENST00000531375 ABCC4O15439 1325 aa33.66■■■□□ 2.98
SHARPIN-205ENST00000531375 HCLS1P14317 486 aaPredicted RBP33.66■■■□□ 2.98
SHARPIN-205ENST00000531375 CCDC184Q52MB2 194 aa33.66■■■□□ 2.98
SHARPIN-205ENST00000531375 JDP2Q8WYK2 163 aa33.66■■■□□ 2.98
SHARPIN-205ENST00000531375 TAF1DQ9H5J8 278 aaPredicted RBP33.66■■■□□ 2.98
SHARPIN-205ENST00000531375 ATP6V0A2Q9Y487 856 aa33.66■■■□□ 2.98
SHARPIN-205ENST00000531375 TCERG1O14776 1098 aaKnown RBP33.65■■■□□ 2.98
SHARPIN-205ENST00000531375 JMYQ8N9B5 988 aa33.64■■■□□ 2.98
SHARPIN-205ENST00000531375 ISCA1Q9BUE6 129 aa33.64■■■□□ 2.98
SHARPIN-205ENST00000531375 DDX60Q8IY21 1712 aaKnown RBP33.64■■■□□ 2.98
SHARPIN-205ENST00000531375 GPC2Q8N158 579 aa33.63■■■□□ 2.97
SHARPIN-205ENST00000531375 BBOX1O75936 387 aa33.62■■■□□ 2.97
SHARPIN-205ENST00000531375 TAF1P21675 1872 aa33.62■■■□□ 2.97
SHARPIN-205ENST00000531375 HACL1Q9UJ83 578 aa33.61■■■□□ 2.97
SHARPIN-205ENST00000531375 LDHDQ86WU2 507 aa33.6■■■□□ 2.97
SHARPIN-205ENST00000531375 TMX4Q9H1E5 349 aaPredicted RBP33.6■■■□□ 2.97
SHARPIN-205ENST00000531375 ELL2O00472 640 aaPredicted RBP33.59■■■□□ 2.97
SHARPIN-205ENST00000531375 TRIM28Q13263 835 aaKnown RBP33.59■■■□□ 2.97
SHARPIN-205ENST00000531375 SP8Q8IXZ3 490 aa33.59■■■□□ 2.97
SHARPIN-205ENST00000531375 LARGE2Q8N3Y3 721 aa33.59■■■□□ 2.97
SHARPIN-205ENST00000531375 ADAMTSL1Q8N6G6 1762 aa33.59■■■□□ 2.97
SHARPIN-205ENST00000531375 ATP5J2-PTCD1G3V325 749 aa33.58■■■□□ 2.97
SHARPIN-205ENST00000531375 EIF6P56537 245 aaKnown RBP33.58■■■□□ 2.97
SHARPIN-205ENST00000531375 DDX46Q7L014 1031 aaKnown RBP33.58■■■□□ 2.97
SHARPIN-205ENST00000531375 C8orf58Q8NAV2 365 aa33.58■■■□□ 2.97
SHARPIN-205ENST00000531375 ZNF428Q96B54 188 aa33.58■■■□□ 2.97
SHARPIN-205ENST00000531375 VPS33BQ9H267 617 aa33.58■■■□□ 2.97
SHARPIN-205ENST00000531375 RTFDC1Q9BY42 306 aaPredicted RBP33.57■■■□□ 2.96
SHARPIN-205ENST00000531375 EPHX2P34913 555 aa33.56■■■□□ 2.96
SHARPIN-205ENST00000531375 GRAPQ13588 217 aa33.56■■■□□ 2.96
SHARPIN-205ENST00000531375 GRAPLQ8TC17 118 aaPredicted RBP33.56■■■□□ 2.96
SHARPIN-205ENST00000531375 FAM89AQ96GI7 184 aa33.56■■■□□ 2.96
SHARPIN-205ENST00000531375 PHAXQ9H814 394 aaKnown RBP33.56■■■□□ 2.96
SHARPIN-205ENST00000531375 CCDC27Q2M243 656 aa33.54■■■□□ 2.96
SHARPIN-205ENST00000531375 PNMA8AQ86V59 439 aaPredicted RBP33.54■■■□□ 2.96
SHARPIN-205ENST00000531375 SUPT20HQ8NEM7 779 aa33.54■■■□□ 2.96
SHARPIN-205ENST00000531375 PPIP5K2O43314 1243 aa33.53■■■□□ 2.96
SHARPIN-205ENST00000531375 SF3B3Q15393 1217 aaKnown RBP33.53■■■□□ 2.96
SHARPIN-205ENST00000531375 EAPPQ56P03 285 aaPredicted RBP33.53■■■□□ 2.96
SHARPIN-205ENST00000531375 RIC3Q7Z5B4 369 aa33.53■■■□□ 2.96
SHARPIN-205ENST00000531375 NIM1KQ8IY84 436 aa33.53■■■□□ 2.96
SHARPIN-205ENST00000531375 PASKQ96RG2 1323 aa33.53■■■□□ 2.96
SHARPIN-205ENST00000531375 GOLGA2Q08379 1002 aa33.52■■■□□ 2.96
SHARPIN-205ENST00000531375 AOC3Q16853 763 aa33.52■■■□□ 2.96
SHARPIN-205ENST00000531375 CREBZFQ9NS37 354 aa33.52■■■□□ 2.96
SHARPIN-205ENST00000531375 GJA3Q9Y6H8 435 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms