RNA–Protein interactions for RNA: ENST00000531173.1

GSDMD-210, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-210ENST00000531173 ZNF853P0CG23 659 aa21.73■■□□□ 1.07
GSDMD-210ENST00000531173 COPS6Q7L5N1 327 aa21.73■■□□□ 1.07
GSDMD-210ENST00000531173 RTKN2Q8IZC4 609 aa21.73■■□□□ 1.07
GSDMD-210ENST00000531173 XAGE3Q8WTP9 111 aa21.73■■□□□ 1.07
GSDMD-210ENST00000531173 CFAP44Q96MT7 982 aa21.73■■□□□ 1.07
GSDMD-210ENST00000531173 DDX21Q9NR30 783 aaKnown RBP eCLIP21.73■■□□□ 1.07
GSDMD-210ENST00000531173 LAMB2P55268 1798 aa21.73■■□□□ 1.07
GSDMD-210ENST00000531173 HOXB7P09629 217 aa21.72■■□□□ 1.07
GSDMD-210ENST00000531173 SLC10A5Q5PT55 438 aa21.72■■□□□ 1.07
GSDMD-210ENST00000531173 NECTIN2Q92692 538 aa21.72■■□□□ 1.07
GSDMD-210ENST00000531173 ZNF277Q9NRM2 450 aaPredicted RBP21.72■■□□□ 1.07
GSDMD-210ENST00000531173 SCN4AP35499 1836 aa21.71■■□□□ 1.07
GSDMD-210ENST00000531173 DDNO94850 711 aaPredicted RBP21.71■■□□□ 1.07
GSDMD-210ENST00000531173 HTRA3P83110 453 aa21.71■■□□□ 1.07
GSDMD-210ENST00000531173 SLC51AQ86UW1 340 aa21.71■■□□□ 1.07
GSDMD-210ENST00000531173 L3MBTL3Q96JM7 780 aaPredicted RBP21.71■■□□□ 1.07
GSDMD-210ENST00000531173 PSMD1Q99460 953 aa21.71■■□□□ 1.07
GSDMD-210ENST00000531173 COL4A5P29400 1685 aa21.71■■□□□ 1.07
GSDMD-210ENST00000531173 PPP1R42Q7Z4L9 355 aa21.7■■□□□ 1.06
GSDMD-210ENST00000531173 CRAMP1Q96RY5 1269 aa21.7■■□□□ 1.06
GSDMD-210ENST00000531173 MBIPQ9NS73 344 aa21.7■■□□□ 1.06
GSDMD-210ENST00000531173 CHPF2Q9P2E5 772 aa21.7■■□□□ 1.06
GSDMD-210ENST00000531173 RNF123Q5XPI4 1314 aa21.7■■□□□ 1.06
GSDMD-210ENST00000531173 APAF1O14727 1248 aa21.69■■□□□ 1.06
GSDMD-210ENST00000531173 NLRP10Q86W26 655 aa21.69■■□□□ 1.06
GSDMD-210ENST00000531173 RPGRQ92834 1020 aaKnown RBP21.69■■□□□ 1.06
GSDMD-210ENST00000531173 UTP14AQ9BVJ6 771 aaKnown RBP21.69■■□□□ 1.06
GSDMD-210ENST00000531173 LAS1LQ9Y4W2 734 aaKnown RBP21.69■■□□□ 1.06
GSDMD-210ENST00000531173 ZNF541Q9H0D2 1346 aa21.69■■□□□ 1.06
GSDMD-210ENST00000531173 TCIRG1Q13488 830 aa21.68■■□□□ 1.06
GSDMD-210ENST00000531173 HDGFL1Q5TGJ6 251 aa21.68■■□□□ 1.06
GSDMD-210ENST00000531173 CC2D2BQ6DHV5 1058 aa21.68■■□□□ 1.06
GSDMD-210ENST00000531173 FZD9O00144 591 aa21.67■■□□□ 1.06
GSDMD-210ENST00000531173 IARSP41252 1262 aaKnown RBP21.67■■□□□ 1.06
GSDMD-210ENST00000531173 AIMP1Q12904 312 aaKnown RBP21.67■■□□□ 1.06
GSDMD-210ENST00000531173 CCDC184Q52MB2 194 aa21.67■■□□□ 1.06
GSDMD-210ENST00000531173 HSP90AB3PQ58FF7 597 aa21.67■■□□□ 1.06
GSDMD-210ENST00000531173 SYNE4Q8N205 404 aa21.67■■□□□ 1.06
GSDMD-210ENST00000531173 POTEIP0CG38 1075 aa21.66■■□□□ 1.06
GSDMD-210ENST00000531173 POTEJP0CG39 1038 aa21.66■■□□□ 1.06
GSDMD-210ENST00000531173 DUSP27Q5VZP5 1158 aa21.66■■□□□ 1.06
GSDMD-210ENST00000531173 KLRG1Q96E93 195 aa21.65■■□□□ 1.06
GSDMD-210ENST00000531173 RBM17Q96I25 401 aaKnown RBP21.65■■□□□ 1.06
GSDMD-210ENST00000531173 NLRP3Q96P20 1036 aa21.65■■□□□ 1.06
GSDMD-210ENST00000531173 IFT57Q9NWB7 429 aa21.65■■□□□ 1.06
GSDMD-210ENST00000531173 DBF4Q9UBU7 674 aaPredicted RBP21.65■■□□□ 1.06
GSDMD-210ENST00000531173 ADAMTSL1Q8N6G6 1762 aa21.65■■□□□ 1.06
GSDMD-210ENST00000531173 DDX60Q8IY21 1712 aaKnown RBP21.65■■□□□ 1.06
GSDMD-210ENST00000531173 TAF1P21675 1872 aa21.64■■□□□ 1.06
GSDMD-210ENST00000531173 PLBD2Q8NHP8 589 aa21.64■■□□□ 1.05
GSDMD-210ENST00000531173 ABCC4O15439 1325 aa21.63■■□□□ 1.05
GSDMD-210ENST00000531173 PPEF1O14829 653 aaPredicted RBP21.63■■□□□ 1.05
GSDMD-210ENST00000531173 GRIPAP1Q4V328 841 aa21.63■■□□□ 1.05
GSDMD-210ENST00000531173 JMYQ8N9B5 988 aa21.63■■□□□ 1.05
GSDMD-210ENST00000531173 ISCA1Q9BUE6 129 aa21.63■■□□□ 1.05
GSDMD-210ENST00000531173 HCLS1P14317 486 aaPredicted RBP21.62■■□□□ 1.05
GSDMD-210ENST00000531173 ANKRD13DQ6ZTN6 518 aa21.62■■□□□ 1.05
GSDMD-210ENST00000531173 TAF1DQ9H5J8 278 aaPredicted RBP21.62■■□□□ 1.05
GSDMD-210ENST00000531173 HYPKQ9NX55 129 aa21.62■■□□□ 1.05
GSDMD-210ENST00000531173 SH3TC1Q8TE82 1336 aa21.61■■□□□ 1.05
GSDMD-210ENST00000531173 IQCA1LA6NCM1 817 aa21.61■■□□□ 1.05
GSDMD-210ENST00000531173 CHADLQ6NUI6 762 aa21.61■■□□□ 1.05
GSDMD-210ENST00000531173 TRMT112Q9UI30 125 aaKnown RBP21.61■■□□□ 1.05
GSDMD-210ENST00000531173 ATP6V0A2Q9Y487 856 aa21.61■■□□□ 1.05
GSDMD-210ENST00000531173 GNAI1P63096 354 aa21.6■■□□□ 1.05
GSDMD-210ENST00000531173 LRRC37AA6NMS7 1700 aa21.6■■□□□ 1.05
GSDMD-210ENST00000531173 CALD1Q05682 793 aaKnown RBP21.59■■□□□ 1.05
GSDMD-210ENST00000531173 LTBP1Q14766 1721 aa21.59■■□□□ 1.05
GSDMD-210ENST00000531173 GPC2Q8N158 579 aa21.59■■□□□ 1.05
GSDMD-210ENST00000531173 TRIM28Q13263 835 aaKnown RBP21.58■■□□□ 1.05
GSDMD-210ENST00000531173 C8orf58Q8NAV2 365 aa21.58■■□□□ 1.05
GSDMD-210ENST00000531173 RTFDC1Q9BY42 306 aaPredicted RBP21.58■■□□□ 1.05
GSDMD-210ENST00000531173 COL4A1P02462 1669 aa21.58■■□□□ 1.05
GSDMD-210ENST00000531173 TCERG1O14776 1098 aaKnown RBP21.57■■□□□ 1.04
GSDMD-210ENST00000531173 BBOX1O75936 387 aa21.57■■□□□ 1.04
GSDMD-210ENST00000531173 LDHDQ86WU2 507 aa21.57■■□□□ 1.04
GSDMD-210ENST00000531173 JDP2Q8WYK2 163 aa21.57■■□□□ 1.04
GSDMD-210ENST00000531173 DUOX1Q9NRD9 1551 aa21.57■■□□□ 1.04
GSDMD-210ENST00000531173 PASKQ96RG2 1323 aa21.56■■□□□ 1.04
GSDMD-210ENST00000531173 ATP5J2-PTCD1G3V325 749 aa21.56■■□□□ 1.04
GSDMD-210ENST00000531173 DIEXFQ68CQ4 756 aaKnown RBP21.56■■□□□ 1.04
GSDMD-210ENST00000531173 SP8Q8IXZ3 490 aa21.56■■□□□ 1.04
GSDMD-210ENST00000531173 ZNF428Q96B54 188 aa21.56■■□□□ 1.04
GSDMD-210ENST00000531173 HACL1Q9UJ83 578 aa21.56■■□□□ 1.04
GSDMD-210ENST00000531173 ELL2O00472 640 aaPredicted RBP21.55■■□□□ 1.04
GSDMD-210ENST00000531173 CCDC27Q2M243 656 aa21.55■■□□□ 1.04
GSDMD-210ENST00000531173 LARGE2Q8N3Y3 721 aa21.55■■□□□ 1.04
GSDMD-210ENST00000531173 FAM89AQ96GI7 184 aa21.55■■□□□ 1.04
GSDMD-210ENST00000531173 PHAXQ9H814 394 aaKnown RBP21.55■■□□□ 1.04
GSDMD-210ENST00000531173 ITGBL1O95965 494 aaPredicted RBP21.54■■□□□ 1.04
GSDMD-210ENST00000531173 EPHX2P34913 555 aa21.54■■□□□ 1.04
GSDMD-210ENST00000531173 GRAPQ13588 217 aa21.54■■□□□ 1.04
GSDMD-210ENST00000531173 SF3B3Q15393 1217 aaKnown RBP21.54■■□□□ 1.04
GSDMD-210ENST00000531173 GRAPLQ8TC17 118 aaPredicted RBP21.54■■□□□ 1.04
GSDMD-210ENST00000531173 VPS33BQ9H267 617 aa21.54■■□□□ 1.04
GSDMD-210ENST00000531173 SCNN1DP51172 638 aa21.53■■□□□ 1.04
GSDMD-210ENST00000531173 DDX46Q7L014 1031 aaKnown RBP21.53■■□□□ 1.04
GSDMD-210ENST00000531173 TSPYL6Q8N831 410 aa21.53■■□□□ 1.04
GSDMD-210ENST00000531173 AOC3Q16853 763 aa21.52■■□□□ 1.04
GSDMD-210ENST00000531173 WWC1Q8IX03 1113 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms