RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 NECTIN2Q92692 538 aa20.24■□□□□ 0.83
CTSB-220ENST00000531089 MRS2Q9HD23 443 aa20.24■□□□□ 0.83
CTSB-220ENST00000531089 ZNF277Q9NRM2 450 aaPredicted RBP20.23■□□□□ 0.83
CTSB-220ENST00000531089 APAF1O14727 1248 aa20.22■□□□□ 0.83
CTSB-220ENST00000531089 SLC10A5Q5PT55 438 aa20.22■□□□□ 0.83
CTSB-220ENST00000531089 PPP1R42Q7Z4L9 355 aa20.22■□□□□ 0.83
CTSB-220ENST00000531089 SYNE4Q8N205 404 aa20.22■□□□□ 0.83
CTSB-220ENST00000531089 LAS1LQ9Y4W2 734 aaKnown RBP20.22■□□□□ 0.83
CTSB-220ENST00000531089 IBTKQ9P2D0 1353 aaPredicted RBP20.22■□□□□ 0.83
CTSB-220ENST00000531089 PARP10Q53GL7 1025 aa20.21■□□□□ 0.83
CTSB-220ENST00000531089 C3orf67Q6ZVT6 689 aa20.21■□□□□ 0.83
CTSB-220ENST00000531089 DDX21Q9NR30 783 aaKnown RBP eCLIP20.21■□□□□ 0.83
CTSB-220ENST00000531089 AIMP1Q12904 312 aaKnown RBP20.2■□□□□ 0.82
CTSB-220ENST00000531089 XAGE3Q8WTP9 111 aa20.2■□□□□ 0.82
CTSB-220ENST00000531089 CRAMP1Q96RY5 1269 aa20.2■□□□□ 0.82
CTSB-220ENST00000531089 SNED1Q8TER0 1413 aa20.2■□□□□ 0.82
CTSB-220ENST00000531089 RIC1Q4ADV7 1423 aa20.19■□□□□ 0.82
CTSB-220ENST00000531089 TCIRG1Q13488 830 aa20.19■□□□□ 0.82
CTSB-220ENST00000531089 RPGRQ92834 1020 aaKnown RBP20.19■□□□□ 0.82
CTSB-220ENST00000531089 KLRG1Q96E93 195 aa20.19■□□□□ 0.82
CTSB-220ENST00000531089 CFAP44Q96MT7 982 aa20.19■□□□□ 0.82
CTSB-220ENST00000531089 NLRP3Q96P20 1036 aa20.19■□□□□ 0.82
CTSB-220ENST00000531089 PSMD1Q99460 953 aa20.19■□□□□ 0.82
CTSB-220ENST00000531089 UTP14AQ9BVJ6 771 aaKnown RBP20.19■□□□□ 0.82
CTSB-220ENST00000531089 IARSP41252 1262 aaKnown RBP20.18■□□□□ 0.82
CTSB-220ENST00000531089 CC2D2BQ6DHV5 1058 aa20.18■□□□□ 0.82
CTSB-220ENST00000531089 RBM17Q96I25 401 aaKnown RBP20.18■□□□□ 0.82
CTSB-220ENST00000531089 FZD9O00144 591 aa20.17■□□□□ 0.82
CTSB-220ENST00000531089 ZNF853P0CG23 659 aa20.17■□□□□ 0.82
CTSB-220ENST00000531089 POTEIP0CG38 1075 aa20.17■□□□□ 0.82
CTSB-220ENST00000531089 POTEJP0CG39 1038 aa20.17■□□□□ 0.82
CTSB-220ENST00000531089 SLC51AQ86UW1 340 aa20.17■□□□□ 0.82
CTSB-220ENST00000531089 NLRP10Q86W26 655 aa20.17■□□□□ 0.82
CTSB-220ENST00000531089 L3MBTL3Q96JM7 780 aaPredicted RBP20.17■□□□□ 0.82
CTSB-220ENST00000531089 HSP90AB3PQ58FF7 597 aa20.16■□□□□ 0.82
CTSB-220ENST00000531089 CHPF2Q9P2E5 772 aa20.16■□□□□ 0.82
CTSB-220ENST00000531089 SCN4AP35499 1836 aa20.15■□□□□ 0.82
CTSB-220ENST00000531089 HOXB7P09629 217 aa20.15■□□□□ 0.82
CTSB-220ENST00000531089 CALD1Q05682 793 aaKnown RBP20.15■□□□□ 0.82
CTSB-220ENST00000531089 JMYQ8N9B5 988 aa20.15■□□□□ 0.82
CTSB-220ENST00000531089 ZNF541Q9H0D2 1346 aa20.15■□□□□ 0.82
CTSB-220ENST00000531089 TCERG1O14776 1098 aaKnown RBP20.14■□□□□ 0.81
CTSB-220ENST00000531089 HDGFL1Q5TGJ6 251 aa20.14■□□□□ 0.81
CTSB-220ENST00000531089 DUSP27Q5VZP5 1158 aa20.14■□□□□ 0.81
CTSB-220ENST00000531089 CHADLQ6NUI6 762 aa20.14■□□□□ 0.81
CTSB-220ENST00000531089 TAF1DQ9H5J8 278 aaPredicted RBP20.14■□□□□ 0.81
CTSB-220ENST00000531089 MBIPQ9NS73 344 aa20.14■□□□□ 0.81
CTSB-220ENST00000531089 ANKRD36CQ5JPF3 1778 aa20.14■□□□□ 0.81
CTSB-220ENST00000531089 GRIPAP1Q4V328 841 aa20.13■□□□□ 0.81
CTSB-220ENST00000531089 ANKRD13DQ6ZTN6 518 aa20.13■□□□□ 0.81
CTSB-220ENST00000531089 IQCA1LA6NCM1 817 aa20.12■□□□□ 0.81
CTSB-220ENST00000531089 HCLS1P14317 486 aaPredicted RBP20.12■□□□□ 0.81
CTSB-220ENST00000531089 PLBD2Q8NHP8 589 aa20.12■□□□□ 0.81
CTSB-220ENST00000531089 DBF4Q9UBU7 674 aaPredicted RBP20.12■□□□□ 0.81
CTSB-220ENST00000531089 TRMT112Q9UI30 125 aaKnown RBP20.12■□□□□ 0.81
CTSB-220ENST00000531089 PPEF1O14829 653 aaPredicted RBP20.11■□□□□ 0.81
CTSB-220ENST00000531089 RNF123Q5XPI4 1314 aa20.11■□□□□ 0.81
CTSB-220ENST00000531089 LAMB2P55268 1798 aa20.11■□□□□ 0.81
CTSB-220ENST00000531089 TAF1P21675 1872 aa20.11■□□□□ 0.81
CTSB-220ENST00000531089 COL4A5P29400 1685 aa20.11■□□□□ 0.81
CTSB-220ENST00000531089 IFFO2Q5TF58 517 aa20.1■□□□□ 0.81
CTSB-220ENST00000531089 JDP2Q8WYK2 163 aa20.1■□□□□ 0.81
CTSB-220ENST00000531089 ISCA1Q9BUE6 129 aa20.1■□□□□ 0.81
CTSB-220ENST00000531089 ATP6V0A2Q9Y487 856 aa20.1■□□□□ 0.81
CTSB-220ENST00000531089 BBOX1O75936 387 aa20.1■□□□□ 0.81
CTSB-220ENST00000531089 GNAI1P63096 354 aa20.1■□□□□ 0.81
CTSB-220ENST00000531089 FAM9BQ8IZU0 186 aa20.1■□□□□ 0.81
CTSB-220ENST00000531089 GPC2Q8N158 579 aa20.1■□□□□ 0.81
CTSB-220ENST00000531089 ZNF428Q96B54 188 aa20.1■□□□□ 0.81
CTSB-220ENST00000531089 IFT57Q9NWB7 429 aa20.1■□□□□ 0.81
CTSB-220ENST00000531089 HYPKQ9NX55 129 aa20.1■□□□□ 0.81
CTSB-220ENST00000531089 ABCC4O15439 1325 aa20.1■□□□□ 0.81
CTSB-220ENST00000531089 LDHDQ86WU2 507 aa20.09■□□□□ 0.81
CTSB-220ENST00000531089 SP8Q8IXZ3 490 aa20.09■□□□□ 0.81
CTSB-220ENST00000531089 HACL1Q9UJ83 578 aa20.09■□□□□ 0.81
CTSB-220ENST00000531089 SH3TC1Q8TE82 1336 aa20.09■□□□□ 0.81
CTSB-220ENST00000531089 ELL2O00472 640 aaPredicted RBP20.08■□□□□ 0.8
CTSB-220ENST00000531089 ITGBL1O95965 494 aaPredicted RBP20.08■□□□□ 0.8
CTSB-220ENST00000531089 CCDC27Q2M243 656 aa20.08■□□□□ 0.8
CTSB-220ENST00000531089 NCBP3Q53F19 620 aaKnown RBP20.08■□□□□ 0.8
CTSB-220ENST00000531089 ATP5J2-PTCD1G3V325 749 aa20.07■□□□□ 0.8
CTSB-220ENST00000531089 EPHX2P34913 555 aa20.07■□□□□ 0.8
CTSB-220ENST00000531089 TRIM28Q13263 835 aaKnown RBP20.07■□□□□ 0.8
CTSB-220ENST00000531089 LARGE2Q8N3Y3 721 aa20.07■□□□□ 0.8
CTSB-220ENST00000531089 C8orf58Q8NAV2 365 aa20.07■□□□□ 0.8
CTSB-220ENST00000531089 PASKQ96RG2 1323 aa20.06■□□□□ 0.8
CTSB-220ENST00000531089 EIF6P56537 245 aaKnown RBP20.06■□□□□ 0.8
CTSB-220ENST00000531089 FAM89AQ96GI7 184 aa20.06■□□□□ 0.8
CTSB-220ENST00000531089 RTFDC1Q9BY42 306 aaPredicted RBP20.06■□□□□ 0.8
CTSB-220ENST00000531089 VPS33BQ9H267 617 aa20.06■□□□□ 0.8
CTSB-220ENST00000531089 PHAXQ9H814 394 aaKnown RBP20.06■□□□□ 0.8
CTSB-220ENST00000531089 DDX46Q7L014 1031 aaKnown RBP20.05■□□□□ 0.8
CTSB-220ENST00000531089 WWC1Q8IX03 1113 aa20.05■□□□□ 0.8
CTSB-220ENST00000531089 EAPPQ56P03 285 aaPredicted RBP20.04■□□□□ 0.8
CTSB-220ENST00000531089 TMX4Q9H1E5 349 aaPredicted RBP20.04■□□□□ 0.8
CTSB-220ENST00000531089 CREBZFQ9NS37 354 aa20.04■□□□□ 0.8
CTSB-220ENST00000531089 GJA3Q9Y6H8 435 aa20.04■□□□□ 0.8
CTSB-220ENST00000531089 GRAPQ13588 217 aa20.03■□□□□ 0.8
CTSB-220ENST00000531089 SF3B3Q15393 1217 aaKnown RBP20.03■□□□□ 0.8
CTSB-220ENST00000531089 AOC3Q16853 763 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms