RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 SUSD4Q5VX71 490 aa17.65■□□□□ 0.42
HIF3A-214ENST00000531043 ZBTB3Q9H5J0 574 aa17.65■□□□□ 0.42
HIF3A-214ENST00000531043 FMR1Q06787 632 aaKnown RBP eCLIP17.64■□□□□ 0.41
HIF3A-214ENST00000531043 TCERG1O14776 1098 aaKnown RBP17.63■□□□□ 0.41
HIF3A-214ENST00000531043 CNTROBQ8N137 903 aa17.63■□□□□ 0.41
HIF3A-214ENST00000531043 PSMD1Q99460 953 aa17.63■□□□□ 0.41
HIF3A-214ENST00000531043 NFE2L2Q16236 605 aa17.62■□□□□ 0.41
HIF3A-214ENST00000531043 GPC2Q8N158 579 aa17.62■□□□□ 0.41
HIF3A-214ENST00000531043 NYXQ9GZU5 481 aa17.62■□□□□ 0.41
HIF3A-214ENST00000531043 GJA3Q9Y6H8 435 aa17.62■□□□□ 0.41
HIF3A-214ENST00000531043 NTSR2O95665 410 aa17.61■□□□□ 0.41
HIF3A-214ENST00000531043 HOXA10P31260 410 aaPredicted RBP17.61■□□□□ 0.41
HIF3A-214ENST00000531043 KIF6Q6ZMV9 814 aa17.61■□□□□ 0.41
HIF3A-214ENST00000531043 ZNF34Q8IZ26 560 aa17.61■□□□□ 0.41
HIF3A-214ENST00000531043 PNISRQ8TF01 805 aaKnown RBP17.61■□□□□ 0.41
HIF3A-214ENST00000531043 EPS15P42566 896 aa17.6■□□□□ 0.41
HIF3A-214ENST00000531043 LRP10Q7Z4F1 713 aa17.6■□□□□ 0.41
HIF3A-214ENST00000531043 RPGRQ92834 1020 aaKnown RBP17.6■□□□□ 0.41
HIF3A-214ENST00000531043 WBP1LQ9NX94 342 aa17.6■□□□□ 0.41
HIF3A-214ENST00000531043 RIC1Q4ADV7 1423 aa17.59■□□□□ 0.41
HIF3A-214ENST00000531043 ANXA1P04083 346 aa17.59■□□□□ 0.41
HIF3A-214ENST00000531043 SCNN1DP51172 638 aa17.59■□□□□ 0.41
HIF3A-214ENST00000531043 PROSER3Q2NL68 480 aa17.59■□□□□ 0.41
HIF3A-214ENST00000531043 PNMA8AQ86V59 439 aaPredicted RBP17.59■□□□□ 0.41
HIF3A-214ENST00000531043 JDP2Q8WYK2 163 aa17.59■□□□□ 0.41
HIF3A-214ENST00000531043 IBTKQ9P2D0 1353 aaPredicted RBP17.58■□□□□ 0.4
HIF3A-214ENST00000531043 RASSF10A6NK89 507 aa17.58■□□□□ 0.4
HIF3A-214ENST00000531043 PPEF1O14829 653 aaPredicted RBP17.58■□□□□ 0.4
HIF3A-214ENST00000531043 LBX1P52954 281 aa17.58■□□□□ 0.4
HIF3A-214ENST00000531043 EIF6P56537 245 aaKnown RBP17.58■□□□□ 0.4
HIF3A-214ENST00000531043 PDIA6Q15084 440 aa17.58■□□□□ 0.4
HIF3A-214ENST00000531043 GIGYF2Q6Y7W6 1299 aaKnown RBP17.58■□□□□ 0.4
HIF3A-214ENST00000531043 LARGE2Q8N3Y3 721 aa17.58■□□□□ 0.4
HIF3A-214ENST00000531043 CRAMP1Q96RY5 1269 aa17.58■□□□□ 0.4
HIF3A-214ENST00000531043 PRDM10Q9NQV6 1147 aa17.58■□□□□ 0.4
HIF3A-214ENST00000531043 TAF1P21675 1872 aa17.57■□□□□ 0.4
HIF3A-214ENST00000531043 CTCFP49711 727 aaPredicted RBP17.57■□□□□ 0.4
HIF3A-214ENST00000531043 DEFB115Q30KQ5 88 aa17.57■□□□□ 0.4
HIF3A-214ENST00000531043 CC2D2BQ6DHV5 1058 aa17.57■□□□□ 0.4
HIF3A-214ENST00000531043 RBM17Q96I25 401 aaKnown RBP17.57■□□□□ 0.4
HIF3A-214ENST00000531043 LAMB2P55268 1798 aa17.56■□□□□ 0.4
HIF3A-214ENST00000531043 TRAF5O00463 557 aa17.56■□□□□ 0.4
HIF3A-214ENST00000531043 NEFMP07197 916 aa17.56■□□□□ 0.4
HIF3A-214ENST00000531043 EIF2S2P20042 333 aaKnown RBP17.56■□□□□ 0.4
HIF3A-214ENST00000531043 AIDAQ96BJ3 306 aa17.56■□□□□ 0.4
HIF3A-214ENST00000531043 DDX21Q9NR30 783 aaKnown RBP eCLIP17.56■□□□□ 0.4
HIF3A-214ENST00000531043 ABT1Q9ULW3 272 aaKnown RBP17.56■□□□□ 0.4
HIF3A-214ENST00000531043 TRPM7Q96QT4 1865 aa17.56■□□□□ 0.4
HIF3A-214ENST00000531043 WDR33Q9C0J8 1336 aaKnown RBP17.55■□□□□ 0.4
HIF3A-214ENST00000531043 HSPA8P11142 646 aaKnown RBP17.55■□□□□ 0.4
HIF3A-214ENST00000531043 AOC3Q16853 763 aa17.55■□□□□ 0.4
HIF3A-214ENST00000531043 TSPYL4Q9UJ04 414 aa17.55■□□□□ 0.4
HIF3A-214ENST00000531043 PPIP5K2O43314 1243 aa17.54■□□□□ 0.4
HIF3A-214ENST00000531043 LMOD1P29536 600 aaPredicted RBP17.54■□□□□ 0.4
HIF3A-214ENST00000531043 NECTIN2Q92692 538 aa17.54■□□□□ 0.4
HIF3A-214ENST00000531043 ZNF428Q96B54 188 aa17.54■□□□□ 0.4
HIF3A-214ENST00000531043 ABCC4O15439 1325 aa17.53■□□□□ 0.4
HIF3A-214ENST00000531043 ERBB4Q15303 1308 aa17.53■□□□□ 0.4
HIF3A-214ENST00000531043 CST9Q5W186 159 aa17.53■□□□□ 0.4
HIF3A-214ENST00000531043 PPP1R42Q7Z4L9 355 aa17.53■□□□□ 0.4
HIF3A-214ENST00000531043 NIM1KQ8IY84 436 aa17.53■□□□□ 0.4
HIF3A-214ENST00000531043 UTP14AQ9BVJ6 771 aaKnown RBP17.53■□□□□ 0.4
HIF3A-214ENST00000531043 ATP6V0A2Q9Y487 856 aa17.53■□□□□ 0.4
HIF3A-214ENST00000531043 MAPK8IP3Q9UPT6 1336 aa17.52■□□□□ 0.4
HIF3A-214ENST00000531043 HCLS1P14317 486 aaPredicted RBP17.52■□□□□ 0.4
HIF3A-214ENST00000531043 KRT24Q2M2I5 525 aa17.52■□□□□ 0.4
HIF3A-214ENST00000531043 SLC10A5Q5PT55 438 aa17.52■□□□□ 0.4
HIF3A-214ENST00000531043 NLRP3Q96P20 1036 aa17.52■□□□□ 0.4
HIF3A-214ENST00000531043 ANKRD36CQ5JPF3 1778 aa17.51■□□□□ 0.39
HIF3A-214ENST00000531043 RIPK4P57078 832 aa17.51■□□□□ 0.39
HIF3A-214ENST00000531043 CXCL9Q07325 125 aa17.51■□□□□ 0.39
HIF3A-214ENST00000531043 PARP10Q53GL7 1025 aa17.51■□□□□ 0.39
HIF3A-214ENST00000531043 CYP4F22Q6NT55 531 aa17.51■□□□□ 0.39
HIF3A-214ENST00000531043 AIMP1Q12904 312 aaKnown RBP17.5■□□□□ 0.39
HIF3A-214ENST00000531043 GRM1Q13255 1194 aa17.5■□□□□ 0.39
HIF3A-214ENST00000531043 GRIPAP1Q4V328 841 aa17.5■□□□□ 0.39
HIF3A-214ENST00000531043 COPS6Q7L5N1 327 aa17.5■□□□□ 0.39
HIF3A-214ENST00000531043 XAGE3Q8WTP9 111 aa17.5■□□□□ 0.39
HIF3A-214ENST00000531043 CAPNS2Q96L46 248 aa17.5■□□□□ 0.39
HIF3A-214ENST00000531043 GPRC5DQ9NZD1 345 aa17.5■□□□□ 0.39
HIF3A-214ENST00000531043 SHTN1A0MZ66 631 aa17.49■□□□□ 0.39
HIF3A-214ENST00000531043 GMPSP49915 693 aaPredicted RBP17.49■□□□□ 0.39
HIF3A-214ENST00000531043 PAXIP1Q6ZW49 1069 aaPredicted RBP17.49■□□□□ 0.39
HIF3A-214ENST00000531043 USP50Q70EL3 339 aaPredicted RBP17.49■□□□□ 0.39
HIF3A-214ENST00000531043 NLRP10Q86W26 655 aa17.49■□□□□ 0.39
HIF3A-214ENST00000531043 RTFDC1Q9BY42 306 aaPredicted RBP17.49■□□□□ 0.39
HIF3A-214ENST00000531043 THSD7BQ9C0I4 1608 aa17.49■□□□□ 0.39
HIF3A-214ENST00000531043 TMPOP42166 694 aaKnown RBP17.48■□□□□ 0.39
HIF3A-214ENST00000531043 ZNRF3Q9ULT6 936 aa17.48■□□□□ 0.39
HIF3A-214ENST00000531043 AOC2O75106 756 aa17.47■□□□□ 0.39
HIF3A-214ENST00000531043 RAD17O75943 681 aa17.47■□□□□ 0.39
HIF3A-214ENST00000531043 HIRAP54198 1017 aaPredicted RBP17.47■□□□□ 0.39
HIF3A-214ENST00000531043 MAP2K1Q02750 393 aaPredicted RBP17.47■□□□□ 0.39
HIF3A-214ENST00000531043 GLIS2Q9BZE0 524 aaPredicted RBP17.47■□□□□ 0.39
HIF3A-214ENST00000531043 PNNQ9H307 717 aaKnown RBP17.47■□□□□ 0.39
HIF3A-214ENST00000531043 ADARB2Q9NS39 739 aaKnown RBP17.47■□□□□ 0.39
HIF3A-214ENST00000531043 TSKSQ9UJT2 592 aa17.47■□□□□ 0.39
HIF3A-214ENST00000531043 COL4A1P02462 1669 aa17.47■□□□□ 0.39
HIF3A-214ENST00000531043 POLR2AP24928 1970 aaKnown RBP17.47■□□□□ 0.39
HIF3A-214ENST00000531043 DUOX1Q9NRD9 1551 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms