RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 NEURL1BA8MQ27 555 aa13.22□□□□□ -0.29
CSDE1-213ENST00000530784 PTCD1O75127 700 aaKnown RBP13.22□□□□□ -0.29
CSDE1-213ENST00000530784 C16orf46Q6P387 395 aa13.22□□□□□ -0.29
CSDE1-213ENST00000530784 IFT43Q96FT9 208 aa13.22□□□□□ -0.29
CSDE1-213ENST00000530784 SCNN1AP37088 669 aa13.21□□□□□ -0.29
CSDE1-213ENST00000530784 PCBP4P57723 403 aaKnown RBP13.21□□□□□ -0.29
CSDE1-213ENST00000530784 ZNF468Q5VIY5 522 aaPredicted RBP13.21□□□□□ -0.29
CSDE1-213ENST00000530784 GALNT6Q8NCL4 622 aa13.21□□□□□ -0.29
CSDE1-213ENST00000530784 LRRC4BQ9NT99 713 aa13.21□□□□□ -0.29
CSDE1-213ENST00000530784 DNMT3AQ9Y6K1 912 aaPredicted RBP13.21□□□□□ -0.29
CSDE1-213ENST00000530784 MICAL2O94851 1124 aa13.2□□□□□ -0.3
CSDE1-213ENST00000530784 IDH3AP50213 366 aa13.2□□□□□ -0.3
CSDE1-213ENST00000530784 SPEM2Q0P670 501 aa13.2□□□□□ -0.3
CSDE1-213ENST00000530784 ENAMQ9NRM1 1142 aa13.2□□□□□ -0.3
CSDE1-213ENST00000530784 SEPT3Q9UH03 358 aa13.2□□□□□ -0.3
CSDE1-213ENST00000530784 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
CSDE1-213ENST00000530784 SHISA8B8ZZ34 492 aa13.19□□□□□ -0.3
CSDE1-213ENST00000530784 SSFA2P28290 1259 aa13.19□□□□□ -0.3
CSDE1-213ENST00000530784 ADH6P28332 368 aa13.19□□□□□ -0.3
CSDE1-213ENST00000530784 SLCO4C1Q6ZQN7 724 aa13.19□□□□□ -0.3
CSDE1-213ENST00000530784 EDARADDQ8WWZ3 215 aa13.19□□□□□ -0.3
CSDE1-213ENST00000530784 AVENQ9NQS1 362 aaPredicted RBP13.19□□□□□ -0.3
CSDE1-213ENST00000530784 INPP5BP32019 993 aa13.18□□□□□ -0.3
CSDE1-213ENST00000530784 RAB44Q7Z6P3 723 aaPredicted RBP13.18□□□□□ -0.3
CSDE1-213ENST00000530784 GRNP28799 593 aaKnown RBP13.17□□□□□ -0.3
CSDE1-213ENST00000530784 SYT9Q86SS6 491 aa13.17□□□□□ -0.3
CSDE1-213ENST00000530784 NEDD1Q8NHV4 660 aa13.17□□□□□ -0.3
CSDE1-213ENST00000530784 ZCCHC6Q5VYS8 1495 aaKnown RBP13.16□□□□□ -0.3
CSDE1-213ENST00000530784 TNFRSF10BO14763 440 aa13.16□□□□□ -0.3
CSDE1-213ENST00000530784 OPLAHO14841 1288 aa13.16□□□□□ -0.3
CSDE1-213ENST00000530784 FAM26DQ5JW98 314 aa13.16□□□□□ -0.3
CSDE1-213ENST00000530784 FCHSD1Q86WN1 690 aa13.16□□□□□ -0.3
CSDE1-213ENST00000530784 TREML1Q86YW5 311 aa13.16□□□□□ -0.3
CSDE1-213ENST00000530784 EPXP11678 715 aa13.15□□□□□ -0.3
CSDE1-213ENST00000530784 BRD2P25440 801 aaKnown RBP13.15□□□□□ -0.3
CSDE1-213ENST00000530784 ARSDP51689 593 aa13.15□□□□□ -0.3
CSDE1-213ENST00000530784 PHLDB3Q6NSJ2 640 aa13.15□□□□□ -0.3
CSDE1-213ENST00000530784 ETFBKMTQ8IXQ9 262 aa13.15□□□□□ -0.3
CSDE1-213ENST00000530784 USTQ9Y2C2 406 aa13.15□□□□□ -0.3
CSDE1-213ENST00000530784 EPB42P16452 691 aa13.13□□□□□ -0.31
CSDE1-213ENST00000530784 MARSP56192 900 aaKnown RBP13.13□□□□□ -0.31
CSDE1-213ENST00000530784 RETREG2Q8NC44 543 aa13.13□□□□□ -0.31
CSDE1-213ENST00000530784 GSX2Q9BZM3 304 aa13.13□□□□□ -0.31
CSDE1-213ENST00000530784 USP20Q9Y2K6 914 aa13.13□□□□□ -0.31
CSDE1-213ENST00000530784 DCAF1Q9Y4B6 1507 aa13.13□□□□□ -0.31
CSDE1-213ENST00000530784 BHMTQ93088 406 aa13.12□□□□□ -0.31
CSDE1-213ENST00000530784 SIN3BO75182 1162 aa13.11□□□□□ -0.31
CSDE1-213ENST00000530784 NEUROD1Q13562 356 aa13.11□□□□□ -0.31
CSDE1-213ENST00000530784 BTBD6Q96KE9 485 aa13.11□□□□□ -0.31
CSDE1-213ENST00000530784 CCINQ13939 588 aa13.1□□□□□ -0.31
CSDE1-213ENST00000530784 RGL4Q8IZJ4 473 aa13.1□□□□□ -0.31
CSDE1-213ENST00000530784 STIM2Q9P246 746 aa13.1□□□□□ -0.31
CSDE1-213ENST00000530784 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
CSDE1-213ENST00000530784 AMPD1P23109 780 aa13.09□□□□□ -0.31
CSDE1-213ENST00000530784 ZBTB39O15060 712 aa13.08□□□□□ -0.32
CSDE1-213ENST00000530784 MDFIQ99750 246 aa13.08□□□□□ -0.32
CSDE1-213ENST00000530784 CNTNAP5Q8WYK1 1306 aa13.08□□□□□ -0.32
CSDE1-213ENST00000530784 SNRPNP63162 240 aaKnown RBP13.07□□□□□ -0.32
CSDE1-213ENST00000530784 CMTR1Q8N1G2 835 aaKnown RBP13.07□□□□□ -0.32
CSDE1-213ENST00000530784 GTF3C2Q8WUA4 911 aaPredicted RBP13.07□□□□□ -0.32
CSDE1-213ENST00000530784 PNMA5Q96PV4 448 aa13.07□□□□□ -0.32
CSDE1-213ENST00000530784 RRAGCQ9HB90 399 aa13.07□□□□□ -0.32
CSDE1-213ENST00000530784 SHROOM4Q9ULL8 1493 aa13.07□□□□□ -0.32
CSDE1-213ENST00000530784 ELOA3CA0A087WX78 387 aaPredicted RBP13.06□□□□□ -0.32
CSDE1-213ENST00000530784 ELOA3DA6NLF2 546 aaPredicted RBP13.06□□□□□ -0.32
CSDE1-213ENST00000530784 NFKB1P19838 968 aa13.06□□□□□ -0.32
CSDE1-213ENST00000530784 ELOA3BQ3SY89 546 aa13.06□□□□□ -0.32
CSDE1-213ENST00000530784 ELOA3Q8NG57 546 aa13.06□□□□□ -0.32
CSDE1-213ENST00000530784 HELQQ8TDG4 1101 aa13.06□□□□□ -0.32
CSDE1-213ENST00000530784 TNFRSF25Q93038 417 aa13.06□□□□□ -0.32
CSDE1-213ENST00000530784 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.06□□□□□ -0.32
CSDE1-213ENST00000530784 ADARB2-AS1A8MUL3 147 aa13.05□□□□□ -0.32
CSDE1-213ENST00000530784 HOXB4P17483 251 aaPredicted RBP13.05□□□□□ -0.32
CSDE1-213ENST00000530784 CHSY3Q70JA7 882 aa13.05□□□□□ -0.32
CSDE1-213ENST00000530784 KRT25Q7Z3Z0 450 aa13.05□□□□□ -0.32
CSDE1-213ENST00000530784 SCARF2Q96GP6 870 aaPredicted RBP13.05□□□□□ -0.32
CSDE1-213ENST00000530784 EFCC1Q9HA90 598 aa13.05□□□□□ -0.32
CSDE1-213ENST00000530784 TARSP26639 723 aaKnown RBP13.04□□□□□ -0.32
CSDE1-213ENST00000530784 ZAP70P43403 619 aa13.04□□□□□ -0.32
CSDE1-213ENST00000530784 IGFLR1Q9H665 355 aa13.04□□□□□ -0.32
CSDE1-213ENST00000530784 C11orf16Q9NQ32 467 aa13.04□□□□□ -0.32
CSDE1-213ENST00000530784 KCNMB2Q9Y691 235 aa13.04□□□□□ -0.32
CSDE1-213ENST00000530784 SASH3O75995 380 aa13.03□□□□□ -0.32
CSDE1-213ENST00000530784 ALAS2P22557 587 aa13.03□□□□□ -0.32
CSDE1-213ENST00000530784 MTMR3Q13615 1198 aa13.03□□□□□ -0.32
CSDE1-213ENST00000530784 BEND7Q8N7W2 519 aaPredicted RBP13.03□□□□□ -0.32
CSDE1-213ENST00000530784 ABTB2Q8N961 1025 aa13.03□□□□□ -0.32
CSDE1-213ENST00000530784 ZFATQ9P243 1243 aa13.03□□□□□ -0.32
CSDE1-213ENST00000530784 XYLBO75191 536 aa13.02□□□□□ -0.33
CSDE1-213ENST00000530784 ADH7P40394 386 aa13.02□□□□□ -0.33
CSDE1-213ENST00000530784 TBC1D8BQ0IIM8 1120 aa13.02□□□□□ -0.33
CSDE1-213ENST00000530784 IRS1P35568 1242 aa13.01□□□□□ -0.33
CSDE1-213ENST00000530784 KCNMA1Q12791 1236 aa13.01□□□□□ -0.33
CSDE1-213ENST00000530784 PODNQ7Z5L7 613 aa13.01□□□□□ -0.33
CSDE1-213ENST00000530784 UBE2OQ9C0C9 1292 aaKnown RBP13.01□□□□□ -0.33
CSDE1-213ENST00000530784 SCRIBQ14160 1630 aa13.01□□□□□ -0.33
CSDE1-213ENST00000530784 RNF225M0QZC1 329 aaPredicted RBP13□□□□□ -0.33
CSDE1-213ENST00000530784 EGFRP00533 1210 aa13□□□□□ -0.33
CSDE1-213ENST00000530784 GSK3AP49840 483 aa13□□□□□ -0.33
CSDE1-213ENST00000530784 B4GALNT3Q6L9W6 998 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms