RNA–Protein interactions for RNA: ENST00000530704.6

PPT1-210, Transcript of palmitoyl-protein thioesterase 1, humanhuman

TSL 1 (best)

Gene PPT1, Length 2,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPT1-210ENST00000530704 FERMT3Q86UX7 667 aa15.68■□□□□ 0.1
PPT1-210ENST00000530704 NECAB1Q8N987 351 aa15.68■□□□□ 0.1
PPT1-210ENST00000530704 ERO1AQ96HE7 468 aa15.68■□□□□ 0.1
PPT1-210ENST00000530704 USP44Q9H0E7 712 aa15.68■□□□□ 0.1
PPT1-210ENST00000530704 NAP1L2Q9ULW6 460 aaPredicted RBP15.68■□□□□ 0.1
PPT1-210ENST00000530704 CYP46A1Q9Y6A2 500 aa15.68■□□□□ 0.1
PPT1-210ENST00000530704 USP6P35125 1406 aa15.68■□□□□ 0.1
PPT1-210ENST00000530704 XRN1Q8IZH2 1706 aaKnown RBP15.67■□□□□ 0.1
PPT1-210ENST00000530704 NEMFO60524 1076 aa15.67■□□□□ 0.1
PPT1-210ENST00000530704 PTPN14Q15678 1187 aa15.67■□□□□ 0.1
PPT1-210ENST00000530704 RHPN1Q8TCX5 695 aa15.67■□□□□ 0.1
PPT1-210ENST00000530704 BCL11BQ9C0K0 894 aaPredicted RBP15.67■□□□□ 0.1
PPT1-210ENST00000530704 SCAND2PQ9GZW5 306 aaPredicted RBP15.67■□□□□ 0.1
PPT1-210ENST00000530704 DNAJC25Q9H1X3 360 aa15.67■□□□□ 0.1
PPT1-210ENST00000530704 PTH1RQ03431 593 aa15.67■□□□□ 0.1
PPT1-210ENST00000530704 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.67■□□□□ 0.1
PPT1-210ENST00000530704 V9GYY5 206 aaPredicted RBP15.67■□□□□ 0.1
PPT1-210ENST00000530704 ERBB3P21860 1342 aa15.67■□□□□ 0.1
PPT1-210ENST00000530704 NPHP3Q7Z494 1330 aa15.67■□□□□ 0.1
PPT1-210ENST00000530704 SURF6O75683 361 aaKnown RBP15.66■□□□□ 0.1
PPT1-210ENST00000530704 ELF2Q15723 593 aa15.66■□□□□ 0.1
PPT1-210ENST00000530704 SARM1Q6SZW1 724 aa15.66■□□□□ 0.1
PPT1-210ENST00000530704 CREBRFQ8IUR6 639 aa15.66■□□□□ 0.1
PPT1-210ENST00000530704 CALCOCO1Q9P1Z2 691 aa15.66■□□□□ 0.1
PPT1-210ENST00000530704 GOLGA6L4A6NEF3 574 aa15.66■□□□□ 0.1
PPT1-210ENST00000530704 VGLL3A8MV65 326 aa15.66■□□□□ 0.1
PPT1-210ENST00000530704 CAVIN2O95810 425 aa15.66■□□□□ 0.1
PPT1-210ENST00000530704 CDK11BP21127 795 aaKnown RBP15.66■□□□□ 0.1
PPT1-210ENST00000530704 SLC20A2Q08357 652 aa15.66■□□□□ 0.1
PPT1-210ENST00000530704 POLA2Q14181 598 aa15.66■□□□□ 0.1
PPT1-210ENST00000530704 ARID5BQ14865 1188 aa15.66■□□□□ 0.1
PPT1-210ENST00000530704 PRPF40BQ6NWY9 871 aaKnown RBP15.66■□□□□ 0.1
PPT1-210ENST00000530704 LEO1Q8WVC0 666 aaPredicted RBP15.66■□□□□ 0.1
PPT1-210ENST00000530704 KIF1BPQ96EK5 621 aa15.66■□□□□ 0.1
PPT1-210ENST00000530704 SPATA32Q96LK8 384 aa15.66■□□□□ 0.1
PPT1-210ENST00000530704 TPCN1Q9ULQ1 816 aa15.66■□□□□ 0.1
PPT1-210ENST00000530704 AMOTL2Q9Y2J4 779 aa15.66■□□□□ 0.1
PPT1-210ENST00000530704 TULP2O00295 520 aa15.65■□□□□ 0.1
PPT1-210ENST00000530704 NR1I2O75469 434 aa15.65■□□□□ 0.1
PPT1-210ENST00000530704 UBTFL1P0CB47 393 aaPredicted RBP15.65■□□□□ 0.1
PPT1-210ENST00000530704 MRFAP1L1Q96HT8 127 aa15.65■□□□□ 0.1
PPT1-210ENST00000530704 ZNF446Q9NWS9 450 aa15.65■□□□□ 0.1
PPT1-210ENST00000530704 FOXO3O43524 673 aa15.65■□□□□ 0.1
PPT1-210ENST00000530704 PDCP20941 246 aa15.65■□□□□ 0.1
PPT1-210ENST00000530704 IQCB1Q15051 598 aa15.65■□□□□ 0.1
PPT1-210ENST00000530704 ST7Q9NRC1 585 aa15.65■□□□□ 0.1
PPT1-210ENST00000530704 TFIP11Q9UBB9 837 aaKnown RBP15.65■□□□□ 0.1
PPT1-210ENST00000530704 SKILP12757 684 aa15.64■□□□□ 0.09
PPT1-210ENST00000530704 CCDC30Q5VVM6 783 aa15.64■□□□□ 0.09
PPT1-210ENST00000530704 PPP1R42Q7Z4L9 355 aa15.64■□□□□ 0.09
PPT1-210ENST00000530704 IPO4Q8TEX9 1081 aaKnown RBP15.64■□□□□ 0.09
PPT1-210ENST00000530704 RGPD8O14715 1765 aaPredicted RBP15.64■□□□□ 0.09
PPT1-210ENST00000530704 NALCNQ8IZF0 1738 aa15.64■□□□□ 0.09
PPT1-210ENST00000530704 CRYBG1Q9Y4K1 1723 aa15.64■□□□□ 0.09
PPT1-210ENST00000530704 ADGRL3Q9HAR2 1447 aa15.64■□□□□ 0.09
PPT1-210ENST00000530704 USP42Q9H9J4 1324 aaKnown RBP15.64■□□□□ 0.09
PPT1-210ENST00000530704 ERICH4A6NGS2 130 aa15.63■□□□□ 0.09
PPT1-210ENST00000530704 SLU7O95391 586 aaKnown RBP15.63■□□□□ 0.09
PPT1-210ENST00000530704 NECTIN1Q15223 517 aa15.63■□□□□ 0.09
PPT1-210ENST00000530704 RUFY2Q8WXA3 655 aa15.63■□□□□ 0.09
PPT1-210ENST00000530704 PGBD1Q96JS3 809 aa15.63■□□□□ 0.09
PPT1-210ENST00000530704 KCND1Q9NSA2 647 aa15.63■□□□□ 0.09
PPT1-210ENST00000530704 CCZ1BP86790 482 aa15.63■□□□□ 0.09
PPT1-210ENST00000530704 CCZ1P86791 482 aaPredicted RBP15.63■□□□□ 0.09
PPT1-210ENST00000530704 MAP3K5Q99683 1374 aa15.63■□□□□ 0.09
PPT1-210ENST00000530704 MTHFSDQ2M296 383 aaKnown RBP15.62■□□□□ 0.09
PPT1-210ENST00000530704 RNF20Q5VTR2 975 aa15.62■□□□□ 0.09
PPT1-210ENST00000530704 CCAR2Q8N163 923 aaKnown RBP15.62■□□□□ 0.09
PPT1-210ENST00000530704 DDX54Q8TDD1 881 aaKnown RBP15.62■□□□□ 0.09
PPT1-210ENST00000530704 RGPD1P0DJD0 1748 aa15.62■□□□□ 0.09
PPT1-210ENST00000530704 USP31Q70CQ4 1352 aa15.62■□□□□ 0.09
PPT1-210ENST00000530704 MAP3K19Q56UN5 1328 aa15.62■□□□□ 0.09
PPT1-210ENST00000530704 EID1Q9Y6B2 187 aa15.62■□□□□ 0.09
PPT1-210ENST00000530704 RIMS1Q86UR5 1692 aaKnown RBP15.62■□□□□ 0.09
PPT1-210ENST00000530704 PXDNLA1KZ92 1463 aa15.61■□□□□ 0.09
PPT1-210ENST00000530704 CCDC69A6NI79 296 aa15.61■□□□□ 0.09
PPT1-210ENST00000530704 GOLGA6L19H0YKK7 550 aa15.61■□□□□ 0.09
PPT1-210ENST00000530704 H2AFXP16104 143 aaPredicted RBP15.61■□□□□ 0.09
PPT1-210ENST00000530704 CAPN2P17655 700 aa15.61■□□□□ 0.09
PPT1-210ENST00000530704 CYP2C19P33261 490 aa15.61■□□□□ 0.09
PPT1-210ENST00000530704 BMS1Q14692 1282 aaKnown RBP15.61■□□□□ 0.09
PPT1-210ENST00000530704 FBXO41Q8TF61 875 aa15.61■□□□□ 0.09
PPT1-210ENST00000530704 DNAJC2Q99543 621 aaKnown RBP15.61■□□□□ 0.09
PPT1-210ENST00000530704 GLRX3O76003 335 aaKnown RBP15.61■□□□□ 0.09
PPT1-210ENST00000530704 NECTIN2Q92692 538 aa15.61■□□□□ 0.09
PPT1-210ENST00000530704 NOL10Q9BSC4 688 aaKnown RBP15.61■□□□□ 0.09
PPT1-210ENST00000530704 TRMT1Q9NXH9 659 aaKnown RBP15.61■□□□□ 0.09
PPT1-210ENST00000530704 N4BP2Q86UW6 1770 aaPredicted RBP15.61■□□□□ 0.09
PPT1-210ENST00000530704 TTC41PQ6P2S7 1318 aa15.6■□□□□ 0.09
PPT1-210ENST00000530704 FAM208AQ9UK61 1670 aaKnown RBP15.6■□□□□ 0.09
PPT1-210ENST00000530704 KIF2AO00139 706 aaPredicted RBP15.6■□□□□ 0.09
PPT1-210ENST00000530704 ZKSCAN1P17029 563 aaPredicted RBP15.6■□□□□ 0.09
PPT1-210ENST00000530704 LARP1Q6PKG0 1096 aaKnown RBP15.6■□□□□ 0.09
PPT1-210ENST00000530704 C11orf57Q6ZUT1 292 aaPredicted RBP15.6■□□□□ 0.09
PPT1-210ENST00000530704 BICD2Q8TD16 824 aa15.6■□□□□ 0.09
PPT1-210ENST00000530704 USP16Q9Y5T5 823 aa15.6■□□□□ 0.09
PPT1-210ENST00000530704 CHD2O14647 1828 aaKnown RBP15.6■□□□□ 0.09
PPT1-210ENST00000530704 CREB3L3Q68CJ9 461 aa15.6■□□□□ 0.09
PPT1-210ENST00000530704 L2HGDHQ9H9P8 463 aa15.6■□□□□ 0.09
PPT1-210ENST00000530704 SRGAP3O43295 1099 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms