RNA–Protein interactions for RNA: ENST00000530695.1

PKP3-207, Transcript of plakophilin 3, humanhuman

TSL 5

Gene PKP3, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-207ENST00000530695 PARP10Q53GL7 1025 aa22.23■■□□□ 1.15
PKP3-207ENST00000530695 PPP1R42Q7Z4L9 355 aa22.23■■□□□ 1.15
PKP3-207ENST00000530695 PRKRIP1Q9H875 184 aaPredicted RBP22.23■■□□□ 1.15
PKP3-207ENST00000530695 KLRG1Q96E93 195 aa22.22■■□□□ 1.15
PKP3-207ENST00000530695 LAMB2P55268 1798 aa22.22■■□□□ 1.15
PKP3-207ENST00000530695 HOXA10P31260 410 aaPredicted RBP22.21■■□□□ 1.15
PKP3-207ENST00000530695 AIMP1Q12904 312 aaKnown RBP22.21■■□□□ 1.15
PKP3-207ENST00000530695 KRT24Q2M2I5 525 aa22.21■■□□□ 1.15
PKP3-207ENST00000530695 SYNE4Q8N205 404 aa22.21■■□□□ 1.15
PKP3-207ENST00000530695 IARSP41252 1262 aaKnown RBP22.2■■□□□ 1.14
PKP3-207ENST00000530695 COPS6Q7L5N1 327 aa22.2■■□□□ 1.14
PKP3-207ENST00000530695 XAGE3Q8WTP9 111 aa22.2■■□□□ 1.14
PKP3-207ENST00000530695 RBM17Q96I25 401 aaKnown RBP22.2■■□□□ 1.14
PKP3-207ENST00000530695 UTP14AQ9BVJ6 771 aaKnown RBP22.2■■□□□ 1.14
PKP3-207ENST00000530695 SNED1Q8TER0 1413 aa22.2■■□□□ 1.14
PKP3-207ENST00000530695 CC2D2BQ6DHV5 1058 aa22.19■■□□□ 1.14
PKP3-207ENST00000530695 DDX21Q9NR30 783 aaKnown RBP eCLIP22.19■■□□□ 1.14
PKP3-207ENST00000530695 ZNF541Q9H0D2 1346 aa22.18■■□□□ 1.14
PKP3-207ENST00000530695 IQCA1LA6NCM1 817 aa22.18■■□□□ 1.14
PKP3-207ENST00000530695 HSP90AB3PQ58FF7 597 aa22.18■■□□□ 1.14
PKP3-207ENST00000530695 C3orf67Q6ZVT6 689 aa22.18■■□□□ 1.14
PKP3-207ENST00000530695 L3MBTL3Q96JM7 780 aaPredicted RBP22.18■■□□□ 1.14
PKP3-207ENST00000530695 NLRP3Q96P20 1036 aa22.18■■□□□ 1.14
PKP3-207ENST00000530695 CRAMP1Q96RY5 1269 aa22.18■■□□□ 1.14
PKP3-207ENST00000530695 PSMD1Q99460 953 aa22.18■■□□□ 1.14
PKP3-207ENST00000530695 CHADLQ6NUI6 762 aa22.17■■□□□ 1.14
PKP3-207ENST00000530695 CHPF2Q9P2E5 772 aa22.17■■□□□ 1.14
PKP3-207ENST00000530695 PPEF1O14829 653 aaPredicted RBP22.16■■□□□ 1.14
PKP3-207ENST00000530695 SLC10A5Q5PT55 438 aa22.16■■□□□ 1.14
PKP3-207ENST00000530695 RNF123Q5XPI4 1314 aa22.15■■□□□ 1.14
PKP3-207ENST00000530695 FZD9O00144 591 aa22.15■■□□□ 1.14
PKP3-207ENST00000530695 TCERG1O14776 1098 aaKnown RBP22.15■■□□□ 1.14
PKP3-207ENST00000530695 HOXB7P09629 217 aa22.15■■□□□ 1.14
PKP3-207ENST00000530695 POTEIP0CG38 1075 aa22.15■■□□□ 1.14
PKP3-207ENST00000530695 POTEJP0CG39 1038 aa22.15■■□□□ 1.14
PKP3-207ENST00000530695 GRIPAP1Q4V328 841 aa22.15■■□□□ 1.14
PKP3-207ENST00000530695 HDGFL1Q5TGJ6 251 aa22.15■■□□□ 1.14
PKP3-207ENST00000530695 JMYQ8N9B5 988 aa22.15■■□□□ 1.14
PKP3-207ENST00000530695 JDP2Q8WYK2 163 aa22.15■■□□□ 1.14
PKP3-207ENST00000530695 CFAP44Q96MT7 982 aa22.15■■□□□ 1.14
PKP3-207ENST00000530695 TAF1P21675 1872 aa22.15■■□□□ 1.14
PKP3-207ENST00000530695 TCIRG1Q13488 830 aa22.14■■□□□ 1.13
PKP3-207ENST00000530695 IFFO2Q5TF58 517 aa22.14■■□□□ 1.13
PKP3-207ENST00000530695 NLRP10Q86W26 655 aa22.14■■□□□ 1.13
PKP3-207ENST00000530695 TAF1DQ9H5J8 278 aaPredicted RBP22.14■■□□□ 1.13
PKP3-207ENST00000530695 COL4A5P29400 1685 aa22.13■■□□□ 1.13
PKP3-207ENST00000530695 APAF1O14727 1248 aa22.12■■□□□ 1.13
PKP3-207ENST00000530695 SLC51AQ86UW1 340 aa22.12■■□□□ 1.13
PKP3-207ENST00000530695 LDHDQ86WU2 507 aa22.12■■□□□ 1.13
PKP3-207ENST00000530695 TMX4Q9H1E5 349 aaPredicted RBP22.12■■□□□ 1.13
PKP3-207ENST00000530695 MBIPQ9NS73 344 aa22.12■■□□□ 1.13
PKP3-207ENST00000530695 DBF4Q9UBU7 674 aaPredicted RBP22.12■■□□□ 1.13
PKP3-207ENST00000530695 TRMT112Q9UI30 125 aaKnown RBP22.12■■□□□ 1.13
PKP3-207ENST00000530695 HACL1Q9UJ83 578 aa22.12■■□□□ 1.13
PKP3-207ENST00000530695 DDX60Q8IY21 1712 aaKnown RBP22.11■■□□□ 1.13
PKP3-207ENST00000530695 HCLS1P14317 486 aaPredicted RBP22.11■■□□□ 1.13
PKP3-207ENST00000530695 DUSP27Q5VZP5 1158 aa22.11■■□□□ 1.13
PKP3-207ENST00000530695 GPC2Q8N158 579 aa22.11■■□□□ 1.13
PKP3-207ENST00000530695 ABCC4O15439 1325 aa22.1■■□□□ 1.13
PKP3-207ENST00000530695 SH3TC1Q8TE82 1336 aa22.1■■□□□ 1.13
PKP3-207ENST00000530695 EAPPQ56P03 285 aaPredicted RBP22.1■■□□□ 1.13
PKP3-207ENST00000530695 LARGE2Q8N3Y3 721 aa22.1■■□□□ 1.13
PKP3-207ENST00000530695 PLBD2Q8NHP8 589 aa22.1■■□□□ 1.13
PKP3-207ENST00000530695 ATP6V0A2Q9Y487 856 aa22.1■■□□□ 1.13
PKP3-207ENST00000530695 ADAMTSL1Q8N6G6 1762 aa22.1■■□□□ 1.13
PKP3-207ENST00000530695 ZNF853P0CG23 659 aa22.09■■□□□ 1.13
PKP3-207ENST00000530695 EIF6P56537 245 aaKnown RBP22.09■■□□□ 1.13
PKP3-207ENST00000530695 ANKRD13DQ6ZTN6 518 aa22.09■■□□□ 1.13
PKP3-207ENST00000530695 EPHX2P34913 555 aa22.08■■□□□ 1.13
PKP3-207ENST00000530695 ZNF428Q96B54 188 aa22.08■■□□□ 1.13
PKP3-207ENST00000530695 IFT57Q9NWB7 429 aa22.08■■□□□ 1.13
PKP3-207ENST00000530695 HYPKQ9NX55 129 aa22.08■■□□□ 1.13
PKP3-207ENST00000530695 GJA3Q9Y6H8 435 aa22.08■■□□□ 1.13
PKP3-207ENST00000530695 BBOX1O75936 387 aa22.07■■□□□ 1.12
PKP3-207ENST00000530695 CALD1Q05682 793 aaKnown RBP22.07■■□□□ 1.12
PKP3-207ENST00000530695 CREBZFQ9NS37 354 aa22.07■■□□□ 1.12
PKP3-207ENST00000530695 CLEC11AQ9Y240 323 aa22.07■■□□□ 1.12
PKP3-207ENST00000530695 GNAI1P63096 354 aa22.06■■□□□ 1.12
PKP3-207ENST00000530695 DDX46Q7L014 1031 aaKnown RBP22.06■■□□□ 1.12
PKP3-207ENST00000530695 PNMA8AQ86V59 439 aaPredicted RBP22.06■■□□□ 1.12
PKP3-207ENST00000530695 NIM1KQ8IY84 436 aa22.06■■□□□ 1.12
PKP3-207ENST00000530695 LTBP1Q14766 1721 aa22.06■■□□□ 1.12
PKP3-207ENST00000530695 PASKQ96RG2 1323 aa22.06■■□□□ 1.12
PKP3-207ENST00000530695 ATP5J2-PTCD1G3V325 749 aa22.05■■□□□ 1.12
PKP3-207ENST00000530695 PPIP5K2O43314 1243 aa22.05■■□□□ 1.12
PKP3-207ENST00000530695 ISCA1Q9BUE6 129 aa22.05■■□□□ 1.12
PKP3-207ENST00000530695 AOC3Q16853 763 aa22.04■■□□□ 1.12
PKP3-207ENST00000530695 SP8Q8IXZ3 490 aa22.04■■□□□ 1.12
PKP3-207ENST00000530695 SUPT20HQ8NEM7 779 aa22.04■■□□□ 1.12
PKP3-207ENST00000530695 VPS33BQ9H267 617 aa22.04■■□□□ 1.12
PKP3-207ENST00000530695 ELL2O00472 640 aaPredicted RBP22.03■■□□□ 1.12
PKP3-207ENST00000530695 LMOD1P29536 600 aaPredicted RBP22.03■■□□□ 1.12
PKP3-207ENST00000530695 GRAPQ13588 217 aa22.03■■□□□ 1.12
PKP3-207ENST00000530695 DPP8Q6V1X1 898 aaPredicted RBP22.03■■□□□ 1.12
PKP3-207ENST00000530695 GRAPLQ8TC17 118 aaPredicted RBP22.03■■□□□ 1.12
PKP3-207ENST00000530695 LRRC37AA6NMS7 1700 aa22.03■■□□□ 1.12
PKP3-207ENST00000530695 ITGBL1O95965 494 aaPredicted RBP22.02■■□□□ 1.12
PKP3-207ENST00000530695 MPNDQ8N594 471 aa22.02■■□□□ 1.12
PKP3-207ENST00000530695 FAM89AQ96GI7 184 aa22.02■■□□□ 1.12
PKP3-207ENST00000530695 RTFDC1Q9BY42 306 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms