RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 MKRN1Q9UHC7 482 aaKnown RBP6.38□□□□□ -1.39
NUP98-218ENST00000530516 KIAA1024Q9UPX6 916 aa6.38□□□□□ -1.39
NUP98-218ENST00000530516 MAFBQ9Y5Q3 323 aaPredicted RBP6.38□□□□□ -1.39
NUP98-218ENST00000530516 DYRK3O43781 588 aa6.37□□□□□ -1.39
NUP98-218ENST00000530516 H2AFB1P0C5Y9 115 aa6.37□□□□□ -1.39
NUP98-218ENST00000530516 H2AFB2P0C5Z0 115 aa6.37□□□□□ -1.39
NUP98-218ENST00000530516 EPB42P16452 691 aa6.37□□□□□ -1.39
NUP98-218ENST00000530516 ITGB7P26010 798 aa6.37□□□□□ -1.39
NUP98-218ENST00000530516 TRAPPC3LQ5T215 181 aa6.37□□□□□ -1.39
NUP98-218ENST00000530516 SH3PXD2AQ5TCZ1 1133 aa6.37□□□□□ -1.39
NUP98-218ENST00000530516 UBE2OQ9C0C9 1292 aaKnown RBP6.37□□□□□ -1.39
NUP98-218ENST00000530516 ZMYND15Q9H091 742 aa6.37□□□□□ -1.39
NUP98-218ENST00000530516 C11orf16Q9NQ32 467 aa6.37□□□□□ -1.39
NUP98-218ENST00000530516 TFIP11Q9UBB9 837 aaKnown RBP6.37□□□□□ -1.39
NUP98-218ENST00000530516 HCN4Q9Y3Q4 1203 aa6.37□□□□□ -1.39
NUP98-218ENST00000530516 BTLAQ7Z6A9 289 aa6.36□□□□□ -1.39
NUP98-218ENST00000530516 ALDH16A1Q8IZ83 802 aa6.36□□□□□ -1.39
NUP98-218ENST00000530516 BHMTQ93088 406 aa6.36□□□□□ -1.39
NUP98-218ENST00000530516 HSH2DQ96JZ2 352 aa6.36□□□□□ -1.39
NUP98-218ENST00000530516 C2orf49Q9BVC5 232 aaPredicted RBP6.36□□□□□ -1.39
NUP98-218ENST00000530516 PPP1R12CQ9BZL4 782 aa6.36□□□□□ -1.39
NUP98-218ENST00000530516 ATAD2Q6PL18 1390 aa6.35□□□□□ -1.39
NUP98-218ENST00000530516 SCO2A0A1W2PP80 73 aa6.35□□□□□ -1.39
NUP98-218ENST00000530516 DKK1O94907 266 aa6.35□□□□□ -1.39
NUP98-218ENST00000530516 SEC13P55735 322 aa6.35□□□□□ -1.39
NUP98-218ENST00000530516 ADGRE1Q14246 886 aa6.35□□□□□ -1.39
NUP98-218ENST00000530516 RTN1Q16799 776 aa6.35□□□□□ -1.39
NUP98-218ENST00000530516 LENG1Q96BZ8 264 aaPredicted RBP6.35□□□□□ -1.39
NUP98-218ENST00000530516 PNMA5Q96PV4 448 aa6.35□□□□□ -1.39
NUP98-218ENST00000530516 SLC6A14Q9UN76 642 aa6.35□□□□□ -1.39
NUP98-218ENST00000530516 A0A0A0MRY4 1105 aa6.34□□□□□ -1.39
NUP98-218ENST00000530516 TGFBR3LH3BV60 316 aa6.34□□□□□ -1.39
NUP98-218ENST00000530516 CFAP70Q5T0N1 1121 aa6.34□□□□□ -1.39
NUP98-218ENST00000530516 RAB44Q7Z6P3 723 aaPredicted RBP6.34□□□□□ -1.39
NUP98-218ENST00000530516 TXNRD3Q86VQ6 643 aa6.34□□□□□ -1.39
NUP98-218ENST00000530516 DTWD1Q8N5C7 304 aa6.34□□□□□ -1.39
NUP98-218ENST00000530516 TSEN2Q8NCE0 465 aaKnown RBP6.34□□□□□ -1.39
NUP98-218ENST00000530516 ZNF280CQ8ND82 737 aa6.34□□□□□ -1.39
NUP98-218ENST00000530516 JPH1Q9HDC5 661 aaPredicted RBP6.34□□□□□ -1.39
NUP98-218ENST00000530516 FAM229AH3BQW9 127 aa6.33□□□□□ -1.4
NUP98-218ENST00000530516 RASA1P20936 1047 aa6.33□□□□□ -1.4
NUP98-218ENST00000530516 CCINQ13939 588 aa6.33□□□□□ -1.4
NUP98-218ENST00000530516 MBTPS1Q14703 1052 aa6.33□□□□□ -1.4
NUP98-218ENST00000530516 GRIK4Q16099 956 aa6.33□□□□□ -1.4
NUP98-218ENST00000530516 KANK4Q5T7N3 995 aaPredicted RBP6.33□□□□□ -1.4
NUP98-218ENST00000530516 LARP1Q6PKG0 1096 aaKnown RBP6.33□□□□□ -1.4
NUP98-218ENST00000530516 ZNF594Q96JF6 807 aaPredicted RBP6.33□□□□□ -1.4
NUP98-218ENST00000530516 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.33□□□□□ -1.4
NUP98-218ENST00000530516 C21orf2O43822 256 aa6.32□□□□□ -1.4
NUP98-218ENST00000530516 ARID4AP29374 1257 aaPredicted RBP6.32□□□□□ -1.4
NUP98-218ENST00000530516 ARTNQ5T4W7 220 aa6.32□□□□□ -1.4
NUP98-218ENST00000530516 C8orf86Q6ZUL3 223 aa6.32□□□□□ -1.4
NUP98-218ENST00000530516 PSMG3-AS1Q96PY0 264 aa6.32□□□□□ -1.4
NUP98-218ENST00000530516 GSX2Q9BZM3 304 aa6.32□□□□□ -1.4
NUP98-218ENST00000530516 ZFP64Q9NPA5 681 aa6.32□□□□□ -1.4
NUP98-218ENST00000530516 FRRS1LQ9P0K9 344 aa6.32□□□□□ -1.4
NUP98-218ENST00000530516 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.31□□□□□ -1.4
NUP98-218ENST00000530516 RGS9O75916 674 aaPredicted RBP6.31□□□□□ -1.4
NUP98-218ENST00000530516 MAP3K6O95382 1288 aa6.31□□□□□ -1.4
NUP98-218ENST00000530516 IGFBP4P22692 258 aa6.31□□□□□ -1.4
NUP98-218ENST00000530516 TBC1D8BQ0IIM8 1120 aa6.31□□□□□ -1.4
NUP98-218ENST00000530516 CRTC2Q53ET0 693 aaPredicted RBP6.31□□□□□ -1.4
NUP98-218ENST00000530516 PRSS36Q5K4E3 855 aa6.31□□□□□ -1.4
NUP98-218ENST00000530516 FMR1NBQ8N0W7 255 aaPredicted RBP6.31□□□□□ -1.4
NUP98-218ENST00000530516 SCG3Q8WXD2 468 aaKnown RBP6.31□□□□□ -1.4
NUP98-218ENST00000530516 DNAJB12Q9NXW2 375 aaKnown RBP6.31□□□□□ -1.4
NUP98-218ENST00000530516 SELPP16109 830 aa6.3□□□□□ -1.4
NUP98-218ENST00000530516 LMOD1P29536 600 aaPredicted RBP6.3□□□□□ -1.4
NUP98-218ENST00000530516 AFF1P51825 1210 aaKnown RBP6.3□□□□□ -1.4
NUP98-218ENST00000530516 PSAPL1Q6NUJ1 521 aa6.3□□□□□ -1.4
NUP98-218ENST00000530516 KRTAP9-2Q9BYQ4 174 aa6.3□□□□□ -1.4
NUP98-218ENST00000530516 ARID3CA6NKF2 412 aa6.29□□□□□ -1.4
NUP98-218ENST00000530516 PTK7Q13308 1070 aa6.29□□□□□ -1.4
NUP98-218ENST00000530516 NBPF11Q86T75 865 aa6.29□□□□□ -1.4
NUP98-218ENST00000530516 DCAF11Q8TEB1 546 aa6.29□□□□□ -1.4
NUP98-218ENST00000530516 CHMP7Q8WUX9 453 aaPredicted RBP6.29□□□□□ -1.4
NUP98-218ENST00000530516 TTC9Q92623 222 aa6.29□□□□□ -1.4
NUP98-218ENST00000530516 NGLY1Q96IV0 654 aa6.29□□□□□ -1.4
NUP98-218ENST00000530516 HINFPQ9BQA5 517 aa6.29□□□□□ -1.4
NUP98-218ENST00000530516 IGFLR1Q9H665 355 aa6.29□□□□□ -1.4
NUP98-218ENST00000530516 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.29□□□□□ -1.4
NUP98-218ENST00000530516 FAM196BA6NMK8 535 aa6.28□□□□□ -1.4
NUP98-218ENST00000530516 FOXO3O43524 673 aa6.28□□□□□ -1.4
NUP98-218ENST00000530516 NFKB1P19838 968 aa6.28□□□□□ -1.4
NUP98-218ENST00000530516 SRPK2P78362 688 aaKnown RBP6.28□□□□□ -1.4
NUP98-218ENST00000530516 LRP8Q14114 963 aa6.28□□□□□ -1.4
NUP98-218ENST00000530516 MSL1Q68DK7 614 aa6.28□□□□□ -1.4
NUP98-218ENST00000530516 ILDR2Q71H61 639 aa6.28□□□□□ -1.4
NUP98-218ENST00000530516 NUDT8Q8WV74 236 aa6.28□□□□□ -1.4
NUP98-218ENST00000530516 C1orf115Q9H7X2 142 aa6.28□□□□□ -1.4
NUP98-218ENST00000530516 USP21Q9UK80 565 aa6.28□□□□□ -1.4
NUP98-218ENST00000530516 KRTAP9-6A0A140TA67 174 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 USP17L15C9J2P7 530 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 USP17L10C9JJH3 530 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 USP17L13C9JLJ4 530 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 USP17L12C9JPN9 530 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 USP17L11C9JVI0 530 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 USP17L21D6R901 530 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 USP17L18D6R9N7 530 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 USP17L22D6RA61 530 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms