RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 IBTKQ9P2D0 1353 aaPredicted RBP19.73■□□□□ 0.75
CAPN1-219ENST00000530495 MYL6BP14649 208 aa19.73■□□□□ 0.75
CAPN1-219ENST00000530495 SUSD4Q5VX71 490 aa19.73■□□□□ 0.75
CAPN1-219ENST00000530495 ZNF34Q8IZ26 560 aa19.73■□□□□ 0.75
CAPN1-219ENST00000530495 JDP2Q8WYK2 163 aa19.73■□□□□ 0.75
CAPN1-219ENST00000530495 CLEC11AQ9Y240 323 aa19.73■□□□□ 0.75
CAPN1-219ENST00000530495 RIC1Q4ADV7 1423 aa19.73■□□□□ 0.75
CAPN1-219ENST00000530495 GPTP24298 496 aa19.72■□□□□ 0.75
CAPN1-219ENST00000530495 RPGRQ92834 1020 aaKnown RBP19.72■□□□□ 0.75
CAPN1-219ENST00000530495 ZBTB3Q9H5J0 574 aa19.72■□□□□ 0.75
CAPN1-219ENST00000530495 RNF123Q5XPI4 1314 aa19.72■□□□□ 0.75
CAPN1-219ENST00000530495 UBN2Q6ZU65 1347 aa19.72■□□□□ 0.75
CAPN1-219ENST00000530495 GIGYF2Q6Y7W6 1299 aaKnown RBP19.71■□□□□ 0.75
CAPN1-219ENST00000530495 CNTROBQ8N137 903 aa19.71■□□□□ 0.75
CAPN1-219ENST00000530495 CRAMP1Q96RY5 1269 aa19.71■□□□□ 0.75
CAPN1-219ENST00000530495 ERBB4Q15303 1308 aa19.71■□□□□ 0.75
CAPN1-219ENST00000530495 VEGFBP49765 207 aa19.7■□□□□ 0.74
CAPN1-219ENST00000530495 RBM17Q96I25 401 aaKnown RBP19.7■□□□□ 0.74
CAPN1-219ENST00000530495 NTSR2O95665 410 aa19.69■□□□□ 0.74
CAPN1-219ENST00000530495 EIF6P56537 245 aaKnown RBP19.69■□□□□ 0.74
CAPN1-219ENST00000530495 MAP1SQ66K74 1059 aaPredicted RBP19.69■□□□□ 0.74
CAPN1-219ENST00000530495 MAPK8IP3Q9UPT6 1336 aa19.69■□□□□ 0.74
CAPN1-219ENST00000530495 COL4A5P29400 1685 aa19.68■□□□□ 0.74
CAPN1-219ENST00000530495 FOXN1O15353 648 aa19.68■□□□□ 0.74
CAPN1-219ENST00000530495 LRP10Q7Z4F1 713 aa19.68■□□□□ 0.74
CAPN1-219ENST00000530495 PPP1R42Q7Z4L9 355 aa19.68■□□□□ 0.74
CAPN1-219ENST00000530495 PDIA6Q15084 440 aa19.67■□□□□ 0.74
CAPN1-219ENST00000530495 PARP10Q53GL7 1025 aa19.67■□□□□ 0.74
CAPN1-219ENST00000530495 SLC10A5Q5PT55 438 aa19.67■□□□□ 0.74
CAPN1-219ENST00000530495 GJA3Q9Y6H8 435 aa19.67■□□□□ 0.74
CAPN1-219ENST00000530495 RASSF10A6NK89 507 aa19.66■□□□□ 0.74
CAPN1-219ENST00000530495 PPEF1O14829 653 aaPredicted RBP19.66■□□□□ 0.74
CAPN1-219ENST00000530495 DEFB115Q30KQ5 88 aa19.66■□□□□ 0.74
CAPN1-219ENST00000530495 C3orf67Q6ZVT6 689 aa19.66■□□□□ 0.74
CAPN1-219ENST00000530495 LARGE2Q8N3Y3 721 aa19.66■□□□□ 0.74
CAPN1-219ENST00000530495 NLRP3Q96P20 1036 aa19.66■□□□□ 0.74
CAPN1-219ENST00000530495 PRDM10Q9NQV6 1147 aa19.66■□□□□ 0.74
CAPN1-219ENST00000530495 BABAM1Q9NWV8 329 aa19.66■□□□□ 0.74
CAPN1-219ENST00000530495 TSPYL4Q9UJ04 414 aa19.66■□□□□ 0.74
CAPN1-219ENST00000530495 VPS33BQ9H267 617 aa19.65■□□□□ 0.74
CAPN1-219ENST00000530495 WBP1LQ9NX94 342 aa19.65■□□□□ 0.74
CAPN1-219ENST00000530495 LTBP1Q14766 1721 aa19.65■□□□□ 0.74
CAPN1-219ENST00000530495 TCERG1O14776 1098 aaKnown RBP19.64■□□□□ 0.73
CAPN1-219ENST00000530495 EIF2S2P20042 333 aaKnown RBP19.64■□□□□ 0.73
CAPN1-219ENST00000530495 LMOD1P29536 600 aaPredicted RBP19.64■□□□□ 0.73
CAPN1-219ENST00000530495 CTCFP49711 727 aaPredicted RBP19.64■□□□□ 0.73
CAPN1-219ENST00000530495 SCNN1DP51172 638 aa19.64■□□□□ 0.73
CAPN1-219ENST00000530495 RIPK4P57078 832 aa19.64■□□□□ 0.73
CAPN1-219ENST00000530495 AIDAQ96BJ3 306 aa19.64■□□□□ 0.73
CAPN1-219ENST00000530495 UTP14AQ9BVJ6 771 aaKnown RBP19.64■□□□□ 0.73
CAPN1-219ENST00000530495 ATP6V0A2Q9Y487 856 aa19.64■□□□□ 0.73
CAPN1-219ENST00000530495 EPS15P42566 896 aa19.63■□□□□ 0.73
CAPN1-219ENST00000530495 SLC51AQ86UW1 340 aa19.63■□□□□ 0.73
CAPN1-219ENST00000530495 PROSER3Q2NL68 480 aa19.62■□□□□ 0.73
CAPN1-219ENST00000530495 USP50Q70EL3 339 aaPredicted RBP19.62■□□□□ 0.73
CAPN1-219ENST00000530495 NIM1KQ8IY84 436 aa19.62■□□□□ 0.73
CAPN1-219ENST00000530495 TMX4Q9H1E5 349 aaPredicted RBP19.62■□□□□ 0.73
CAPN1-219ENST00000530495 DDX21Q9NR30 783 aaKnown RBP eCLIP19.62■□□□□ 0.73
CAPN1-219ENST00000530495 RTFDC1Q9BY42 306 aaPredicted RBP19.61■□□□□ 0.73
CAPN1-219ENST00000530495 WDR33Q9C0J8 1336 aaKnown RBP19.6■□□□□ 0.73
CAPN1-219ENST00000530495 PPIP5K2O43314 1243 aa19.6■□□□□ 0.73
CAPN1-219ENST00000530495 BBOX1O75936 387 aa19.6■□□□□ 0.73
CAPN1-219ENST00000530495 TMPOP42166 694 aaKnown RBP19.6■□□□□ 0.73
CAPN1-219ENST00000530495 ABT1Q9ULW3 272 aaKnown RBP19.6■□□□□ 0.73
CAPN1-219ENST00000530495 ABCC4O15439 1325 aa19.59■□□□□ 0.73
CAPN1-219ENST00000530495 ANXA1P04083 346 aa19.59■□□□□ 0.73
CAPN1-219ENST00000530495 LMOD3Q0VAK6 560 aa19.59■□□□□ 0.73
CAPN1-219ENST00000530495 AOC3Q16853 763 aa19.59■□□□□ 0.73
CAPN1-219ENST00000530495 HSP90AB3PQ58FF7 597 aa19.59■□□□□ 0.73
CAPN1-219ENST00000530495 COPS6Q7L5N1 327 aa19.59■□□□□ 0.73
CAPN1-219ENST00000530495 SP8Q8IXZ3 490 aa19.59■□□□□ 0.73
CAPN1-219ENST00000530495 SUPT20HQ8NEM7 779 aa19.59■□□□□ 0.73
CAPN1-219ENST00000530495 ANKRD36CQ5JPF3 1778 aa19.59■□□□□ 0.73
CAPN1-219ENST00000530495 LAMB2P55268 1798 aa19.58■□□□□ 0.73
CAPN1-219ENST00000530495 LBX1P52954 281 aa19.58■□□□□ 0.72
CAPN1-219ENST00000530495 MAP2K1Q02750 393 aaPredicted RBP19.58■□□□□ 0.72
CAPN1-219ENST00000530495 RALBP1Q15311 655 aa19.58■□□□□ 0.72
CAPN1-219ENST00000530495 NLRP10Q86W26 655 aa19.58■□□□□ 0.72
CAPN1-219ENST00000530495 GPRC5DQ9NZD1 345 aa19.58■□□□□ 0.72
CAPN1-219ENST00000530495 ZNRF3Q9ULT6 936 aa19.58■□□□□ 0.72
CAPN1-219ENST00000530495 TRPM7Q96QT4 1865 aa19.58■□□□□ 0.72
CAPN1-219ENST00000530495 FMR1Q06787 632 aaKnown RBP eCLIP19.57■□□□□ 0.723e-7■■□□□ 11.4
CAPN1-219ENST00000530495 CXCL9Q07325 125 aa19.57■□□□□ 0.72
CAPN1-219ENST00000530495 TCIRG1Q13488 830 aa19.57■□□□□ 0.72
CAPN1-219ENST00000530495 CST9Q5W186 159 aa19.57■□□□□ 0.72
CAPN1-219ENST00000530495 ADARB2Q9NS39 739 aaKnown RBP19.57■□□□□ 0.72
CAPN1-219ENST00000530495 HCLS1P14317 486 aaPredicted RBP19.56■□□□□ 0.72
CAPN1-219ENST00000530495 AIMP1Q12904 312 aaKnown RBP19.56■□□□□ 0.72
CAPN1-219ENST00000530495 XAGE3Q8WTP9 111 aa19.56■□□□□ 0.72
CAPN1-219ENST00000530495 NECTIN2Q92692 538 aa19.56■□□□□ 0.72
CAPN1-219ENST00000530495 CHL1O00533 1208 aa19.55■□□□□ 0.72
CAPN1-219ENST00000530495 DPP8Q6V1X1 898 aaPredicted RBP19.55■□□□□ 0.72
CAPN1-219ENST00000530495 MPNDQ8N594 471 aa19.55■□□□□ 0.72
CAPN1-219ENST00000530495 TRMT112Q9UI30 125 aaKnown RBP19.55■□□□□ 0.72
CAPN1-219ENST00000530495 TRAF5O00463 557 aa19.54■□□□□ 0.72
CAPN1-219ENST00000530495 HSPA8P11142 646 aaKnown RBP19.54■□□□□ 0.72
CAPN1-219ENST00000530495 KIAA2012Q0VF49 1180 aa19.54■□□□□ 0.72
CAPN1-219ENST00000530495 DDX46Q7L014 1031 aaKnown RBP19.54■□□□□ 0.72
CAPN1-219ENST00000530495 SH3TC1Q8TE82 1336 aa19.53■□□□□ 0.72
CAPN1-219ENST00000530495 ECE1P42892 770 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms