RNA–Protein interactions for RNA: ENST00000530449.1

TCIRG1-211, Transcript of T cell immune regulator 1, ATPase H+ transporting V0 subunit a3, humanhuman

TSL 1 (best)

Gene TCIRG1, Length 525 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCIRG1-211ENST00000530449 HOXA10P31260 410 aaPredicted RBP28.27■■■□□ 2.12
TCIRG1-211ENST00000530449 HTRA3P83110 453 aa28.27■■■□□ 2.12
TCIRG1-211ENST00000530449 COPS6Q7L5N1 327 aa28.27■■■□□ 2.12
TCIRG1-211ENST00000530449 XAGE3Q8WTP9 111 aa28.27■■■□□ 2.12
TCIRG1-211ENST00000530449 DDX21Q9NR30 783 aaKnown RBP eCLIP28.27■■■□□ 2.12
TCIRG1-211ENST00000530449 ANKRD36CQ5JPF3 1778 aa28.27■■■□□ 2.12
TCIRG1-211ENST00000530449 SNED1Q8TER0 1413 aa28.26■■■□□ 2.12
TCIRG1-211ENST00000530449 AIMP1Q12904 312 aaKnown RBP28.26■■■□□ 2.11
TCIRG1-211ENST00000530449 C3orf67Q6ZVT6 689 aa28.25■■■□□ 2.11
TCIRG1-211ENST00000530449 CFAP44Q96MT7 982 aa28.24■■■□□ 2.11
TCIRG1-211ENST00000530449 UTP14AQ9BVJ6 771 aaKnown RBP28.24■■■□□ 2.11
TCIRG1-211ENST00000530449 HOXB7P09629 217 aa28.23■■■□□ 2.11
TCIRG1-211ENST00000530449 HSP90AB3PQ58FF7 597 aa28.23■■■□□ 2.11
TCIRG1-211ENST00000530449 SYNE4Q8N205 404 aa28.23■■■□□ 2.11
TCIRG1-211ENST00000530449 RBM17Q96I25 401 aaKnown RBP28.23■■■□□ 2.11
TCIRG1-211ENST00000530449 CRAMP1Q96RY5 1269 aa28.23■■■□□ 2.11
TCIRG1-211ENST00000530449 CHPF2Q9P2E5 772 aa28.23■■■□□ 2.11
TCIRG1-211ENST00000530449 IARSP41252 1262 aaKnown RBP28.22■■■□□ 2.11
TCIRG1-211ENST00000530449 HDGFL1Q5TGJ6 251 aa28.22■■■□□ 2.11
TCIRG1-211ENST00000530449 CC2D2BQ6DHV5 1058 aa28.22■■■□□ 2.11
TCIRG1-211ENST00000530449 PSMD1Q99460 953 aa28.22■■■□□ 2.11
TCIRG1-211ENST00000530449 APAF1O14727 1248 aa28.21■■■□□ 2.11
TCIRG1-211ENST00000530449 SLC10A5Q5PT55 438 aa28.21■■■□□ 2.11
TCIRG1-211ENST00000530449 NLRP3Q96P20 1036 aa28.21■■■□□ 2.11
TCIRG1-211ENST00000530449 RNF123Q5XPI4 1314 aa28.2■■■□□ 2.11
TCIRG1-211ENST00000530449 ZNF541Q9H0D2 1346 aa28.2■■■□□ 2.11
TCIRG1-211ENST00000530449 NLRP10Q86W26 655 aa28.2■■■□□ 2.1
TCIRG1-211ENST00000530449 L3MBTL3Q96JM7 780 aaPredicted RBP28.2■■■□□ 2.1
TCIRG1-211ENST00000530449 MBIPQ9NS73 344 aa28.2■■■□□ 2.1
TCIRG1-211ENST00000530449 TCIRG1Q13488 830 aa28.19■■■□□ 2.1
TCIRG1-211ENST00000530449 KLRG1Q96E93 195 aa28.19■■■□□ 2.1
TCIRG1-211ENST00000530449 SCN4AP35499 1836 aa28.18■■■□□ 2.1
TCIRG1-211ENST00000530449 PPEF1O14829 653 aaPredicted RBP28.18■■■□□ 2.1
TCIRG1-211ENST00000530449 DUSP27Q5VZP5 1158 aa28.18■■■□□ 2.1
TCIRG1-211ENST00000530449 SLC51AQ86UW1 340 aa28.18■■■□□ 2.1
TCIRG1-211ENST00000530449 LAMB2P55268 1798 aa28.17■■■□□ 2.1
TCIRG1-211ENST00000530449 IQCA1LA6NCM1 817 aa28.17■■■□□ 2.1
TCIRG1-211ENST00000530449 ZNF853P0CG23 659 aa28.17■■■□□ 2.1
TCIRG1-211ENST00000530449 DBF4Q9UBU7 674 aaPredicted RBP28.17■■■□□ 2.1
TCIRG1-211ENST00000530449 FZD9O00144 591 aa28.16■■■□□ 2.1
TCIRG1-211ENST00000530449 POTEIP0CG38 1075 aa28.16■■■□□ 2.1
TCIRG1-211ENST00000530449 POTEJP0CG39 1038 aa28.16■■■□□ 2.1
TCIRG1-211ENST00000530449 GRIPAP1Q4V328 841 aa28.16■■■□□ 2.1
TCIRG1-211ENST00000530449 TCERG1O14776 1098 aaKnown RBP28.15■■■□□ 2.1
TCIRG1-211ENST00000530449 PLBD2Q8NHP8 589 aa28.15■■■□□ 2.1
TCIRG1-211ENST00000530449 IFT57Q9NWB7 429 aa28.15■■■□□ 2.1
TCIRG1-211ENST00000530449 COL4A5P29400 1685 aa28.14■■■□□ 2.1
TCIRG1-211ENST00000530449 HCLS1P14317 486 aaPredicted RBP28.14■■■□□ 2.1
TCIRG1-211ENST00000530449 CHADLQ6NUI6 762 aa28.14■■■□□ 2.1
TCIRG1-211ENST00000530449 TRMT112Q9UI30 125 aaKnown RBP28.14■■■□□ 2.1
TCIRG1-211ENST00000530449 ANKRD13DQ6ZTN6 518 aa28.13■■■□□ 2.09
TCIRG1-211ENST00000530449 JDP2Q8WYK2 163 aa28.13■■■□□ 2.09
TCIRG1-211ENST00000530449 TAF1DQ9H5J8 278 aaPredicted RBP28.13■■■□□ 2.09
TCIRG1-211ENST00000530449 ABCC4O15439 1325 aa28.13■■■□□ 2.09
TCIRG1-211ENST00000530449 SH3TC1Q8TE82 1336 aa28.13■■■□□ 2.09
TCIRG1-211ENST00000530449 GNAI1P63096 354 aa28.12■■■□□ 2.09
TCIRG1-211ENST00000530449 CALD1Q05682 793 aaKnown RBP28.12■■■□□ 2.09
TCIRG1-211ENST00000530449 HYPKQ9NX55 129 aa28.12■■■□□ 2.09
TCIRG1-211ENST00000530449 JMYQ8N9B5 988 aa28.11■■■□□ 2.09
TCIRG1-211ENST00000530449 ATP6V0A2Q9Y487 856 aa28.11■■■□□ 2.09
TCIRG1-211ENST00000530449 CCDC184Q52MB2 194 aa28.1■■■□□ 2.09
TCIRG1-211ENST00000530449 ISCA1Q9BUE6 129 aa28.1■■■□□ 2.09
TCIRG1-211ENST00000530449 HACL1Q9UJ83 578 aa28.1■■■□□ 2.09
TCIRG1-211ENST00000530449 LDHDQ86WU2 507 aa28.09■■■□□ 2.09
TCIRG1-211ENST00000530449 GPC2Q8N158 579 aa28.09■■■□□ 2.09
TCIRG1-211ENST00000530449 LARGE2Q8N3Y3 721 aa28.09■■■□□ 2.09
TCIRG1-211ENST00000530449 ZNF428Q96B54 188 aa28.09■■■□□ 2.09
TCIRG1-211ENST00000530449 TMX4Q9H1E5 349 aaPredicted RBP28.08■■■□□ 2.09
TCIRG1-211ENST00000530449 DDX60Q8IY21 1712 aaKnown RBP28.07■■■□□ 2.08
TCIRG1-211ENST00000530449 ZEB1P37275 1124 aaPredicted RBP28.07■■■□□ 2.08
TCIRG1-211ENST00000530449 EIF6P56537 245 aaKnown RBP28.07■■■□□ 2.08
TCIRG1-211ENST00000530449 ATP5J2-PTCD1G3V325 749 aa28.06■■■□□ 2.08
TCIRG1-211ENST00000530449 ELL2O00472 640 aaPredicted RBP28.06■■■□□ 2.08
TCIRG1-211ENST00000530449 BBOX1O75936 387 aa28.06■■■□□ 2.08
TCIRG1-211ENST00000530449 EPHX2P34913 555 aa28.06■■■□□ 2.08
TCIRG1-211ENST00000530449 DDX46Q7L014 1031 aaKnown RBP28.06■■■□□ 2.08
TCIRG1-211ENST00000530449 TAF1P21675 1872 aa28.05■■■□□ 2.08
TCIRG1-211ENST00000530449 EAPPQ56P03 285 aaPredicted RBP28.05■■■□□ 2.08
TCIRG1-211ENST00000530449 ADAMTSL1Q8N6G6 1762 aa28.05■■■□□ 2.08
TCIRG1-211ENST00000530449 PPIP5K2O43314 1243 aa28.04■■■□□ 2.08
TCIRG1-211ENST00000530449 GRAPQ13588 217 aa28.04■■■□□ 2.08
TCIRG1-211ENST00000530449 SP8Q8IXZ3 490 aa28.04■■■□□ 2.08
TCIRG1-211ENST00000530449 C8orf58Q8NAV2 365 aa28.04■■■□□ 2.08
TCIRG1-211ENST00000530449 GRAPLQ8TC17 118 aaPredicted RBP28.04■■■□□ 2.08
TCIRG1-211ENST00000530449 GJA3Q9Y6H8 435 aa28.04■■■□□ 2.08
TCIRG1-211ENST00000530449 AOC3Q16853 763 aa28.03■■■□□ 2.08
TCIRG1-211ENST00000530449 NIM1KQ8IY84 436 aa28.03■■■□□ 2.08
TCIRG1-211ENST00000530449 FAM89AQ96GI7 184 aa28.03■■■□□ 2.08
TCIRG1-211ENST00000530449 RTFDC1Q9BY42 306 aaPredicted RBP28.03■■■□□ 2.08
TCIRG1-211ENST00000530449 PHAXQ9H814 394 aaKnown RBP28.03■■■□□ 2.08
TCIRG1-211ENST00000530449 PASKQ96RG2 1323 aa28.02■■■□□ 2.08
TCIRG1-211ENST00000530449 TRIM28Q13263 835 aaKnown RBP28.02■■■□□ 2.08
TCIRG1-211ENST00000530449 VPS33BQ9H267 617 aa28.02■■■□□ 2.08
TCIRG1-211ENST00000530449 LTBP1Q14766 1721 aa28.01■■■□□ 2.07
TCIRG1-211ENST00000530449 GOLGA2Q08379 1002 aa28.01■■■□□ 2.07
TCIRG1-211ENST00000530449 IFFO2Q5TF58 517 aa28.01■■■□□ 2.07
TCIRG1-211ENST00000530449 DPP8Q6V1X1 898 aaPredicted RBP28.01■■■□□ 2.07
TCIRG1-211ENST00000530449 RIC3Q7Z5B4 369 aa28.01■■■□□ 2.07
TCIRG1-211ENST00000530449 PNMA8AQ86V59 439 aaPredicted RBP28.01■■■□□ 2.07
TCIRG1-211ENST00000530449 SUPT20HQ8NEM7 779 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms