RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 MYH3P11055 1940 aa13.99□□□□□ -0.17
CAPN1-218ENST00000530442 NUTM1Q86Y26 1132 aa13.98□□□□□ -0.17
CAPN1-218ENST00000530442 NOB1Q9ULX3 412 aaKnown RBP13.98□□□□□ -0.17
CAPN1-218ENST00000530442 NEURL1BA8MQ27 555 aa13.97□□□□□ -0.17
CAPN1-218ENST00000530442 ST5P78524 1137 aa13.97□□□□□ -0.17
CAPN1-218ENST00000530442 TRIM28Q13263 835 aaKnown RBP13.97□□□□□ -0.17
CAPN1-218ENST00000530442 CWF19L2Q2TBE0 894 aaKnown RBP13.97□□□□□ -0.17
CAPN1-218ENST00000530442 ERFEQ4G0M1 354 aa13.97□□□□□ -0.17
CAPN1-218ENST00000530442 PPP1R42Q7Z4L9 355 aa13.97□□□□□ -0.17
CAPN1-218ENST00000530442 NLGN2Q8NFZ4 835 aa13.97□□□□□ -0.17
CAPN1-218ENST00000530442 NYXQ9GZU5 481 aa13.97□□□□□ -0.17
CAPN1-218ENST00000530442 CD2APQ9Y5K6 639 aa13.97□□□□□ -0.17
CAPN1-218ENST00000530442 UTRNP46939 3433 aa13.96□□□□□ -0.17
CAPN1-218ENST00000530442 RNF123Q5XPI4 1314 aa13.96□□□□□ -0.17
CAPN1-218ENST00000530442 NEXNQ0ZGT2 675 aa13.96□□□□□ -0.17
CAPN1-218ENST00000530442 BEND3Q5T5X7 828 aa13.96□□□□□ -0.17
CAPN1-218ENST00000530442 TPTE2Q6XPS3 522 aa13.96□□□□□ -0.17
CAPN1-218ENST00000530442 CCDC191Q8NCU4 936 aa13.96□□□□□ -0.17
CAPN1-218ENST00000530442 SYT17Q9BSW7 474 aa13.96□□□□□ -0.17
CAPN1-218ENST00000530442 UTP14AQ9BVJ6 771 aaKnown RBP13.96□□□□□ -0.17
CAPN1-218ENST00000530442 CWC25Q9NXE8 425 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-218ENST00000530442 ABCC4O15439 1325 aa13.95□□□□□ -0.18
CAPN1-218ENST00000530442 NPHP1O15259 732 aa13.95□□□□□ -0.18
CAPN1-218ENST00000530442 SLC4A10Q6U841 1118 aa13.95□□□□□ -0.18
CAPN1-218ENST00000530442 LINS1Q8NG48 757 aa13.95□□□□□ -0.18
CAPN1-218ENST00000530442 RCAN3Q9UKA8 241 aa13.95□□□□□ -0.18
CAPN1-218ENST00000530442 TNNQ9UQP3 1299 aa13.95□□□□□ -0.18
CAPN1-218ENST00000530442 ARFGEF1Q9Y6D6 1849 aa13.94□□□□□ -0.18
CAPN1-218ENST00000530442 SH3TC1Q8TE82 1336 aa13.94□□□□□ -0.18
CAPN1-218ENST00000530442 TRIM27P14373 513 aa13.94□□□□□ -0.18
CAPN1-218ENST00000530442 SYNE4Q8N205 404 aa13.94□□□□□ -0.18
CAPN1-218ENST00000530442 ARHGAP45Q92619 1136 aa13.94□□□□□ -0.18
CAPN1-218ENST00000530442 FRAT1Q92837 279 aaPredicted RBP13.94□□□□□ -0.18
CAPN1-218ENST00000530442 FAM89AQ96GI7 184 aa13.94□□□□□ -0.18
CAPN1-218ENST00000530442 BRIP1Q9BX63 1249 aa13.94□□□□□ -0.18
CAPN1-218ENST00000530442 API5Q9BZZ5 524 aaKnown RBP13.94□□□□□ -0.18
CAPN1-218ENST00000530442 TRMT112Q9UI30 125 aaKnown RBP13.94□□□□□ -0.18
CAPN1-218ENST00000530442 GTF2E1P29083 439 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-218ENST00000530442 CHRNA5P30532 468 aa13.93□□□□□ -0.18
CAPN1-218ENST00000530442 GCKRQ14397 625 aa13.93□□□□□ -0.18
CAPN1-218ENST00000530442 RTL5Q5HYW3 569 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-218ENST00000530442 ATF7IPQ6VMQ6 1270 aa13.93□□□□□ -0.18
CAPN1-218ENST00000530442 C3orf67Q6ZVT6 689 aa13.93□□□□□ -0.18
CAPN1-218ENST00000530442 ZBTB38Q8NAP3 1195 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-218ENST00000530442 SRCIN1Q9C0H9 1055 aa13.93□□□□□ -0.18
CAPN1-218ENST00000530442 COL4A1P02462 1669 aa13.93□□□□□ -0.18
CAPN1-218ENST00000530442 TAF1P21675 1872 aa13.93□□□□□ -0.18
CAPN1-218ENST00000530442 PCCAP05165 728 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-218ENST00000530442 DPEP1P16444 411 aa13.92□□□□□ -0.18
CAPN1-218ENST00000530442 TGFB2P61812 414 aa13.92□□□□□ -0.18
CAPN1-218ENST00000530442 ZKSCAN2Q63HK3 967 aa13.92□□□□□ -0.18
CAPN1-218ENST00000530442 CDHR2Q9BYE9 1310 aa13.91□□□□□ -0.18
CAPN1-218ENST00000530442 A0A0G2JLW4 131 aa13.91□□□□□ -0.18
CAPN1-218ENST00000530442 KLRG2A4D1S0 409 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-218ENST00000530442 IPO8O15397 1037 aaKnown RBP13.91□□□□□ -0.18
CAPN1-218ENST00000530442 ALDH1L1O75891 902 aa13.91□□□□□ -0.18
CAPN1-218ENST00000530442 HCLS1P14317 486 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-218ENST00000530442 KCNA3P22001 575 aa13.91□□□□□ -0.18
CAPN1-218ENST00000530442 PDE6BP35913 854 aa13.91□□□□□ -0.18
CAPN1-218ENST00000530442 CASP7P55210 303 aa13.91□□□□□ -0.18
CAPN1-218ENST00000530442 CRY2Q49AN0 593 aa13.91□□□□□ -0.18
CAPN1-218ENST00000530442 SLC10A5Q5PT55 438 aa13.91□□□□□ -0.18
CAPN1-218ENST00000530442 C2CD5Q86YS7 1000 aa13.91□□□□□ -0.18
CAPN1-218ENST00000530442 JARID2Q92833 1246 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-218ENST00000530442 SLX4Q8IY92 1834 aa13.91□□□□□ -0.18
CAPN1-218ENST00000530442 SPEF2Q9C093 1822 aa13.91□□□□□ -0.18
CAPN1-218ENST00000530442 H7C1W4 665 aa13.9□□□□□ -0.18
CAPN1-218ENST00000530442 IRS4O14654 1257 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-218ENST00000530442 UBE3BQ7Z3V4 1068 aa13.9□□□□□ -0.18
CAPN1-218ENST00000530442 CLUAP1Q96AJ1 413 aa13.9□□□□□ -0.18
CAPN1-218ENST00000530442 LRRC37AA6NMS7 1700 aa13.9□□□□□ -0.18
CAPN1-218ENST00000530442 GRM8O00222 908 aa13.89□□□□□ -0.19
CAPN1-218ENST00000530442 SRGNP10124 158 aa13.89□□□□□ -0.19
CAPN1-218ENST00000530442 CCT4P50991 539 aaKnown RBP13.89□□□□□ -0.19
CAPN1-218ENST00000530442 WWC3Q9ULE0 1092 aa13.89□□□□□ -0.19
CAPN1-218ENST00000530442 H0YIN7 160 aa13.88□□□□□ -0.19
CAPN1-218ENST00000530442 RLBP1P12271 317 aa13.88□□□□□ -0.19
CAPN1-218ENST00000530442 INTS3Q68E01 1043 aaKnown RBP13.88□□□□□ -0.19
CAPN1-218ENST00000530442 NLRP3Q96P20 1036 aa13.88□□□□□ -0.19
CAPN1-218ENST00000530442 PDZRN3Q9UPQ7 1066 aa13.88□□□□□ -0.19
CAPN1-218ENST00000530442 UTYO14607 1347 aa13.88□□□□□ -0.19
CAPN1-218ENST00000530442 PLIN1O60240 522 aa13.87□□□□□ -0.19
CAPN1-218ENST00000530442 NBPF7P0C2Y1 421 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-218ENST00000530442 FTSJ3Q8IY81 847 aaKnown RBP13.87□□□□□ -0.19
CAPN1-218ENST00000530442 DZIP1LQ8IYY4 767 aaKnown RBP13.87□□□□□ -0.19
CAPN1-218ENST00000530442 TMEM57Q8N5G2 664 aa13.87□□□□□ -0.19
CAPN1-218ENST00000530442 MASTLQ96GX5 879 aa13.87□□□□□ -0.19
CAPN1-218ENST00000530442 A0A1B0GUL6 1792 aa13.86□□□□□ -0.19
CAPN1-218ENST00000530442 PDE8AO60658 829 aa13.86□□□□□ -0.19
CAPN1-218ENST00000530442 NPR1P16066 1061 aa13.86□□□□□ -0.19
CAPN1-218ENST00000530442 STYK1Q6J9G0 422 aa13.86□□□□□ -0.19
CAPN1-218ENST00000530442 ZNF622Q969S3 477 aaKnown RBP eCLIP13.86□□□□□ -0.19
CAPN1-218ENST00000530442 PLA2G12BQ9BX93 195 aa13.86□□□□□ -0.19
CAPN1-218ENST00000530442 USP44Q9H0E7 712 aa13.86□□□□□ -0.19
CAPN1-218ENST00000530442 C9orf78Q9NZ63 289 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-218ENST00000530442 FER1L6Q2WGJ9 1857 aa13.85□□□□□ -0.19
CAPN1-218ENST00000530442 YBX3P16989 372 aaKnown RBP eCLIP13.85□□□□□ -0.193e-6■□□□□ 8.1
CAPN1-218ENST00000530442 HOXA10P31260 410 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-218ENST00000530442 CTSWP56202 376 aa13.85□□□□□ -0.19
CAPN1-218ENST00000530442 SF3B3Q15393 1217 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms