RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 HOXA10P31260 410 aaPredicted RBP27.28■■□□□ 1.96
SMPD1-204ENST00000530395 HTRA3P83110 453 aa27.28■■□□□ 1.96
SMPD1-204ENST00000530395 HSP90AB3PQ58FF7 597 aa27.28■■□□□ 1.96
SMPD1-204ENST00000530395 CC2D2BQ6DHV5 1058 aa27.28■■□□□ 1.96
SMPD1-204ENST00000530395 NECTIN2Q92692 538 aa27.28■■□□□ 1.96
SMPD1-204ENST00000530395 KLRG1Q96E93 195 aa27.27■■□□□ 1.96
SMPD1-204ENST00000530395 RBM17Q96I25 401 aaKnown RBP27.27■■□□□ 1.96
SMPD1-204ENST00000530395 IQCA1LA6NCM1 817 aa27.26■■□□□ 1.95
SMPD1-204ENST00000530395 UTP14AQ9BVJ6 771 aaKnown RBP27.26■■□□□ 1.95
SMPD1-204ENST00000530395 RNF123Q5XPI4 1314 aa27.25■■□□□ 1.95
SMPD1-204ENST00000530395 IARSP41252 1262 aaKnown RBP27.25■■□□□ 1.95
SMPD1-204ENST00000530395 AIMP1Q12904 312 aaKnown RBP27.25■■□□□ 1.95
SMPD1-204ENST00000530395 GRIPAP1Q4V328 841 aa27.25■■□□□ 1.95
SMPD1-204ENST00000530395 COPS6Q7L5N1 327 aa27.25■■□□□ 1.95
SMPD1-204ENST00000530395 SYNE4Q8N205 404 aa27.25■■□□□ 1.95
SMPD1-204ENST00000530395 XAGE3Q8WTP9 111 aa27.25■■□□□ 1.95
SMPD1-204ENST00000530395 PSMD1Q99460 953 aa27.25■■□□□ 1.95
SMPD1-204ENST00000530395 DDX21Q9NR30 783 aaKnown RBP eCLIP27.25■■□□□ 1.95
SMPD1-204ENST00000530395 NLRP3Q96P20 1036 aa27.24■■□□□ 1.95
SMPD1-204ENST00000530395 CRAMP1Q96RY5 1269 aa27.24■■□□□ 1.95
SMPD1-204ENST00000530395 SNED1Q8TER0 1413 aa27.24■■□□□ 1.95
SMPD1-204ENST00000530395 HOXB7P09629 217 aa27.23■■□□□ 1.95
SMPD1-204ENST00000530395 KRT24Q2M2I5 525 aa27.23■■□□□ 1.95
SMPD1-204ENST00000530395 L3MBTL3Q96JM7 780 aaPredicted RBP27.23■■□□□ 1.95
SMPD1-204ENST00000530395 PPEF1O14829 653 aaPredicted RBP27.22■■□□□ 1.95
SMPD1-204ENST00000530395 HDGFL1Q5TGJ6 251 aa27.22■■□□□ 1.95
SMPD1-204ENST00000530395 ZNF541Q9H0D2 1346 aa27.21■■□□□ 1.95
SMPD1-204ENST00000530395 CHADLQ6NUI6 762 aa27.21■■□□□ 1.95
SMPD1-204ENST00000530395 JDP2Q8WYK2 163 aa27.21■■□□□ 1.95
SMPD1-204ENST00000530395 CFAP44Q96MT7 982 aa27.21■■□□□ 1.95
SMPD1-204ENST00000530395 TMX4Q9H1E5 349 aaPredicted RBP27.21■■□□□ 1.95
SMPD1-204ENST00000530395 CHPF2Q9P2E5 772 aa27.21■■□□□ 1.95
SMPD1-204ENST00000530395 LAMB2P55268 1798 aa27.21■■□□□ 1.95
SMPD1-204ENST00000530395 PCNTO95613 3336 aa27.2■■□□□ 1.95
SMPD1-204ENST00000530395 SLC10A5Q5PT55 438 aa27.2■■□□□ 1.94
SMPD1-204ENST00000530395 C3orf67Q6ZVT6 689 aa27.19■■□□□ 1.94
SMPD1-204ENST00000530395 NLRP10Q86W26 655 aa27.19■■□□□ 1.94
SMPD1-204ENST00000530395 FZD9O00144 591 aa27.18■■□□□ 1.94
SMPD1-204ENST00000530395 TCIRG1Q13488 830 aa27.18■■□□□ 1.94
SMPD1-204ENST00000530395 DBF4Q9UBU7 674 aaPredicted RBP27.18■■□□□ 1.94
SMPD1-204ENST00000530395 CALD1Q05682 793 aaKnown RBP27.17■■□□□ 1.94
SMPD1-204ENST00000530395 JMYQ8N9B5 988 aa27.17■■□□□ 1.94
SMPD1-204ENST00000530395 TAF1DQ9H5J8 278 aaPredicted RBP27.17■■□□□ 1.94
SMPD1-204ENST00000530395 TRMT112Q9UI30 125 aaKnown RBP27.17■■□□□ 1.94
SMPD1-204ENST00000530395 TCERG1O14776 1098 aaKnown RBP27.16■■□□□ 1.94
SMPD1-204ENST00000530395 LDHDQ86WU2 507 aa27.16■■□□□ 1.94
SMPD1-204ENST00000530395 HACL1Q9UJ83 578 aa27.16■■□□□ 1.94
SMPD1-204ENST00000530395 APAF1O14727 1248 aa27.15■■□□□ 1.94
SMPD1-204ENST00000530395 POTEIP0CG38 1075 aa27.15■■□□□ 1.94
SMPD1-204ENST00000530395 POTEJP0CG39 1038 aa27.15■■□□□ 1.94
SMPD1-204ENST00000530395 DUSP27Q5VZP5 1158 aa27.15■■□□□ 1.94
SMPD1-204ENST00000530395 GPC2Q8N158 579 aa27.15■■□□□ 1.94
SMPD1-204ENST00000530395 PLBD2Q8NHP8 589 aa27.15■■□□□ 1.94
SMPD1-204ENST00000530395 MBIPQ9NS73 344 aa27.15■■□□□ 1.94
SMPD1-204ENST00000530395 ABCC4O15439 1325 aa27.15■■□□□ 1.94
SMPD1-204ENST00000530395 SH3TC1Q8TE82 1336 aa27.15■■□□□ 1.94
SMPD1-204ENST00000530395 EIF6P56537 245 aaKnown RBP27.14■■□□□ 1.94
SMPD1-204ENST00000530395 IFFO2Q5TF58 517 aa27.14■■□□□ 1.94
SMPD1-204ENST00000530395 LARGE2Q8N3Y3 721 aa27.14■■□□□ 1.94
SMPD1-204ENST00000530395 HYPKQ9NX55 129 aa27.14■■□□□ 1.94
SMPD1-204ENST00000530395 GNAI1P63096 354 aa27.13■■□□□ 1.93
SMPD1-204ENST00000530395 ANKRD13DQ6ZTN6 518 aa27.13■■□□□ 1.93
SMPD1-204ENST00000530395 IFT57Q9NWB7 429 aa27.13■■□□□ 1.93
SMPD1-204ENST00000530395 ATP6V0A2Q9Y487 856 aa27.13■■□□□ 1.93
SMPD1-204ENST00000530395 HCLS1P14317 486 aaPredicted RBP27.12■■□□□ 1.93
SMPD1-204ENST00000530395 EAPPQ56P03 285 aaPredicted RBP27.12■■□□□ 1.93
SMPD1-204ENST00000530395 COL4A5P29400 1685 aa27.11■■□□□ 1.93
SMPD1-204ENST00000530395 DDX60Q8IY21 1712 aaKnown RBP27.11■■□□□ 1.93
SMPD1-204ENST00000530395 ZNF853P0CG23 659 aa27.11■■□□□ 1.93
SMPD1-204ENST00000530395 EPHX2P34913 555 aa27.11■■□□□ 1.93
SMPD1-204ENST00000530395 DDX46Q7L014 1031 aaKnown RBP27.11■■□□□ 1.93
SMPD1-204ENST00000530395 ADAMTSL1Q8N6G6 1762 aa27.1■■□□□ 1.93
SMPD1-204ENST00000530395 BBOX1O75936 387 aa27.1■■□□□ 1.93
SMPD1-204ENST00000530395 PNMA8AQ86V59 439 aaPredicted RBP27.1■■□□□ 1.93
SMPD1-204ENST00000530395 GJA3Q9Y6H8 435 aa27.1■■□□□ 1.93
SMPD1-204ENST00000530395 NIM1KQ8IY84 436 aa27.09■■□□□ 1.93
SMPD1-204ENST00000530395 SUPT20HQ8NEM7 779 aa27.09■■□□□ 1.93
SMPD1-204ENST00000530395 CREBZFQ9NS37 354 aa27.09■■□□□ 1.93
SMPD1-204ENST00000530395 CLEC11AQ9Y240 323 aa27.09■■□□□ 1.93
SMPD1-204ENST00000530395 PPIP5K2O43314 1243 aa27.08■■□□□ 1.93
SMPD1-204ENST00000530395 LMOD1P29536 600 aaPredicted RBP27.08■■□□□ 1.93
SMPD1-204ENST00000530395 SLC51AQ86UW1 340 aa27.08■■□□□ 1.93
SMPD1-204ENST00000530395 VPS33BQ9H267 617 aa27.08■■□□□ 1.93
SMPD1-204ENST00000530395 ISCA1Q9BUE6 129 aa27.07■■□□□ 1.92
SMPD1-204ENST00000530395 TAF1P21675 1872 aa27.06■■□□□ 1.92
SMPD1-204ENST00000530395 GRAPQ13588 217 aa27.06■■□□□ 1.92
SMPD1-204ENST00000530395 DPP8Q6V1X1 898 aaPredicted RBP27.06■■□□□ 1.92
SMPD1-204ENST00000530395 SP8Q8IXZ3 490 aa27.06■■□□□ 1.92
SMPD1-204ENST00000530395 GRAPLQ8TC17 118 aaPredicted RBP27.06■■□□□ 1.92
SMPD1-204ENST00000530395 ATP5J2-PTCD1G3V325 749 aa27.05■■□□□ 1.92
SMPD1-204ENST00000530395 GOLGA2Q08379 1002 aa27.05■■□□□ 1.92
SMPD1-204ENST00000530395 TMC4Q7Z404 712 aa27.05■■□□□ 1.92
SMPD1-204ENST00000530395 CHMP4AQ9BY43 222 aa27.05■■□□□ 1.92
SMPD1-204ENST00000530395 PASKQ96RG2 1323 aa27.05■■□□□ 1.92
SMPD1-204ENST00000530395 ZEB1P37275 1124 aaPredicted RBP27.04■■□□□ 1.92
SMPD1-204ENST00000530395 AOC3Q16853 763 aa27.04■■□□□ 1.92
SMPD1-204ENST00000530395 MPNDQ8N594 471 aa27.04■■□□□ 1.92
SMPD1-204ENST00000530395 ZNF428Q96B54 188 aa27.04■■□□□ 1.92
SMPD1-204ENST00000530395 RTFDC1Q9BY42 306 aaPredicted RBP27.04■■□□□ 1.92
SMPD1-204ENST00000530395 LRRC37AA6NMS7 1700 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms