RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 MCOLN1Q9GZU1 580 aa7.53□□□□□ -1.2
CTSB-216ENST00000530290 ADARB2Q9NS39 739 aaKnown RBP7.53□□□□□ -1.2
CTSB-216ENST00000530290 NIP7Q9Y221 180 aaKnown RBP eCLIP7.53□□□□□ -1.22e-6■■■■□ 20.4
CTSB-216ENST00000530290 BTBD11A6QL63 1104 aa7.52□□□□□ -1.21
CTSB-216ENST00000530290 GTF2E1P29083 439 aaPredicted RBP7.52□□□□□ -1.21
CTSB-216ENST00000530290 HOXA10P31260 410 aaPredicted RBP7.52□□□□□ -1.21
CTSB-216ENST00000530290 SAPCD2Q86UD0 394 aa7.52□□□□□ -1.21
CTSB-216ENST00000530290 NIM1KQ8IY84 436 aa7.52□□□□□ -1.21
CTSB-216ENST00000530290 LARGE2Q8N3Y3 721 aa7.52□□□□□ -1.21
CTSB-216ENST00000530290 CCDC24Q8N4L8 307 aa7.52□□□□□ -1.21
CTSB-216ENST00000530290 SUPT20HQ8NEM7 779 aa7.52□□□□□ -1.21
CTSB-216ENST00000530290 IL17REQ8NFR9 667 aa7.52□□□□□ -1.21
CTSB-216ENST00000530290 SAGE1Q9NXZ1 904 aa7.52□□□□□ -1.21
CTSB-216ENST00000530290 ERVV-1B6SEH8 477 aa7.51□□□□□ -1.21
CTSB-216ENST00000530290 A1BGP04217 495 aa7.51□□□□□ -1.21
CTSB-216ENST00000530290 CYP4F22Q6NT55 531 aa7.51□□□□□ -1.21
CTSB-216ENST00000530290 RPGRQ92834 1020 aaKnown RBP7.51□□□□□ -1.21
CTSB-216ENST00000530290 CRAMP1Q96RY5 1269 aa7.51□□□□□ -1.21
CTSB-216ENST00000530290 GJA3Q9Y6H8 435 aa7.51□□□□□ -1.21
CTSB-216ENST00000530290 DDX60Q8IY21 1712 aaKnown RBP7.5□□□□□ -1.21
CTSB-216ENST00000530290 HTATSF1O43719 755 aaKnown RBP7.5□□□□□ -1.21
CTSB-216ENST00000530290 CELF2O95319 508 aaKnown RBP7.5□□□□□ -1.21
CTSB-216ENST00000530290 HSPA5P11021 654 aaKnown RBP7.5□□□□□ -1.21
CTSB-216ENST00000530290 REM2Q8IYK8 340 aaPredicted RBP7.5□□□□□ -1.21
CTSB-216ENST00000530290 RTF1Q92541 710 aaKnown RBP7.5□□□□□ -1.21
CTSB-216ENST00000530290 RBM17Q96I25 401 aaKnown RBP7.5□□□□□ -1.21
CTSB-216ENST00000530290 GPRC5DQ9NZD1 345 aa7.5□□□□□ -1.21
CTSB-216ENST00000530290 PGAP2Q9UHJ9 254 aa7.5□□□□□ -1.21
CTSB-216ENST00000530290 COL4A5P29400 1685 aa7.5□□□□□ -1.21
CTSB-216ENST00000530290 ERBB4Q15303 1308 aa7.5□□□□□ -1.21
CTSB-216ENST00000530290 ABCC12Q96J65 1359 aa7.49□□□□□ -1.21
CTSB-216ENST00000530290 ANKRD36CQ5JPF3 1778 aa7.49□□□□□ -1.21
CTSB-216ENST00000530290 PPEF1O14829 653 aaPredicted RBP7.49□□□□□ -1.21
CTSB-216ENST00000530290 PPIP5K2O43314 1243 aa7.49□□□□□ -1.21
CTSB-216ENST00000530290 DGKZQ13574 1117 aa7.49□□□□□ -1.21
CTSB-216ENST00000530290 CST9Q5W186 159 aa7.49□□□□□ -1.21
CTSB-216ENST00000530290 CDC37L1Q7L3B6 337 aa7.49□□□□□ -1.21
CTSB-216ENST00000530290 GCC1Q96CN9 775 aa7.49□□□□□ -1.21
CTSB-216ENST00000530290 CFAP53Q96M91 514 aa7.49□□□□□ -1.21
CTSB-216ENST00000530290 MAP3K15Q6ZN16 1313 aa7.49□□□□□ -1.21
CTSB-216ENST00000530290 KDM3BQ7LBC6 1761 aa7.48□□□□□ -1.21
CTSB-216ENST00000530290 U2SURPO15042 1029 aaKnown RBP7.48□□□□□ -1.21
CTSB-216ENST00000530290 EPS15P42566 896 aa7.48□□□□□ -1.21
CTSB-216ENST00000530290 GRM1Q13255 1194 aa7.48□□□□□ -1.21
CTSB-216ENST00000530290 TNIP1Q15025 636 aa7.48□□□□□ -1.21
CTSB-216ENST00000530290 PARP10Q53GL7 1025 aa7.48□□□□□ -1.21
CTSB-216ENST00000530290 KIF6Q6ZMV9 814 aa7.48□□□□□ -1.21
CTSB-216ENST00000530290 TMC4Q7Z404 712 aa7.48□□□□□ -1.21
CTSB-216ENST00000530290 PNISRQ8TF01 805 aaKnown RBP7.48□□□□□ -1.21
CTSB-216ENST00000530290 CCDC102AQ96A19 550 aa7.48□□□□□ -1.21
CTSB-216ENST00000530290 RTFDC1Q9BY42 306 aaPredicted RBP7.48□□□□□ -1.21
CTSB-216ENST00000530290 TSKSQ9UJT2 592 aa7.48□□□□□ -1.21
CTSB-216ENST00000530290 ZNRF3Q9ULT6 936 aa7.48□□□□□ -1.21
CTSB-216ENST00000530290 NUDCQ9Y266 331 aa7.48□□□□□ -1.21
CTSB-216ENST00000530290 USP16Q9Y5T5 823 aa7.48□□□□□ -1.21
CTSB-216ENST00000530290 POLR2AP24928 1970 aaKnown RBP7.48□□□□□ -1.21
CTSB-216ENST00000530290 LRRC37AA6NMS7 1700 aa7.47□□□□□ -1.21
CTSB-216ENST00000530290 TRAF5O00463 557 aa7.47□□□□□ -1.21
CTSB-216ENST00000530290 DLL1O00548 723 aa7.47□□□□□ -1.21
CTSB-216ENST00000530290 AOC2O75106 756 aa7.47□□□□□ -1.21
CTSB-216ENST00000530290 SOX10P56693 466 aa7.47□□□□□ -1.21
CTSB-216ENST00000530290 PKN2Q16513 984 aaKnown RBP7.47□□□□□ -1.21
CTSB-216ENST00000530290 HABP4Q5JVS0 413 aaKnown RBP7.47□□□□□ -1.21
CTSB-216ENST00000530290 CIAPIN1Q6FI81 312 aa7.47□□□□□ -1.21
CTSB-216ENST00000530290 PPP1R42Q7Z4L9 355 aa7.47□□□□□ -1.21
CTSB-216ENST00000530290 ATP6V0A2Q9Y487 856 aa7.47□□□□□ -1.21
CTSB-216ENST00000530290 KIAA0100Q14667 2235 aaKnown RBP7.46□□□□□ -1.22
CTSB-216ENST00000530290 NBPF26B4DH59 902 aa7.46□□□□□ -1.22
CTSB-216ENST00000530290 H7C1D1 291 aa7.46□□□□□ -1.22
CTSB-216ENST00000530290 BBOX1O75936 387 aa7.46□□□□□ -1.22
CTSB-216ENST00000530290 PRKAR2BP31323 418 aa7.46□□□□□ -1.22
CTSB-216ENST00000530290 HUNKP57058 714 aa7.46□□□□□ -1.22
CTSB-216ENST00000530290 KIAA2012Q0VF49 1180 aa7.46□□□□□ -1.22
CTSB-216ENST00000530290 NBPF10Q6P3W6 841 aaKnown RBP7.46□□□□□ -1.22
CTSB-216ENST00000530290 OLFM4Q6UX06 510 aa7.46□□□□□ -1.22
CTSB-216ENST00000530290 NBPF15Q8N660 670 aa7.46□□□□□ -1.22
CTSB-216ENST00000530290 NLRP3Q96P20 1036 aa7.46□□□□□ -1.22
CTSB-216ENST00000530290 BCL2L13Q9BXK5 485 aa7.46□□□□□ -1.22
CTSB-216ENST00000530290 RSPH6AQ9H0K4 717 aa7.46□□□□□ -1.22
CTSB-216ENST00000530290 ZNF609O15014 1411 aa7.45□□□□□ -1.22
CTSB-216ENST00000530290 PER1O15534 1290 aaPredicted RBP7.45□□□□□ -1.22
CTSB-216ENST00000530290 NEFMP07197 916 aa7.45□□□□□ -1.22
CTSB-216ENST00000530290 RPS12P25398 132 aaKnown RBP7.45□□□□□ -1.22
CTSB-216ENST00000530290 GMPSP49915 693 aaPredicted RBP7.45□□□□□ -1.22
CTSB-216ENST00000530290 CXCL9Q07325 125 aa7.45□□□□□ -1.22
CTSB-216ENST00000530290 TAF7Q15545 349 aaPredicted RBP7.45□□□□□ -1.22
CTSB-216ENST00000530290 HSP90AB3PQ58FF7 597 aa7.45□□□□□ -1.22
CTSB-216ENST00000530290 RGMBQ6NW40 437 aa7.45□□□□□ -1.22
CTSB-216ENST00000530290 CTU1Q7Z7A3 348 aaKnown RBP7.45□□□□□ -1.22
CTSB-216ENST00000530290 C2orf69Q8N8R5 385 aa7.45□□□□□ -1.22
CTSB-216ENST00000530290 NECTIN2Q92692 538 aa7.45□□□□□ -1.22
CTSB-216ENST00000530290 DPF2Q92785 391 aa7.45□□□□□ -1.22
CTSB-216ENST00000530290 GLIS2Q9BZE0 524 aaPredicted RBP7.45□□□□□ -1.22
CTSB-216ENST00000530290 LAMB2P55268 1798 aa7.45□□□□□ -1.22
CTSB-216ENST00000530290 PAPPA2Q9BXP8 1791 aa7.45□□□□□ -1.22
CTSB-216ENST00000530290 DLG5Q8TDM6 1919 aa7.44□□□□□ -1.22
CTSB-216ENST00000530290 FAM177BA6PVY3 158 aa7.44□□□□□ -1.22
CTSB-216ENST00000530290 KCNQ3O43525 872 aa7.44□□□□□ -1.22
CTSB-216ENST00000530290 NTSR2O95665 410 aa7.44□□□□□ -1.22
CTSB-216ENST00000530290 PIP4K2AP48426 406 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms