RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 BRWD3Q6RI45 1802 aa10.72□□□□□ -0.69
SVIP-204ENST00000530199 ATP2B4P23634 1241 aa10.72□□□□□ -0.69
SVIP-204ENST00000530199 SEC13P55735 322 aa10.72□□□□□ -0.69
SVIP-204ENST00000530199 DDX17Q92841 729 aaKnown RBP10.72□□□□□ -0.69
SVIP-204ENST00000530199 MAP4K5Q9Y4K4 846 aa10.72□□□□□ -0.69
SVIP-204ENST00000530199 SOS2Q07890 1332 aaPredicted RBP10.72□□□□□ -0.69
SVIP-204ENST00000530199 NINLQ9Y2I6 1382 aa10.72□□□□□ -0.69
SVIP-204ENST00000530199 ARID4AP29374 1257 aaPredicted RBP10.71□□□□□ -0.69
SVIP-204ENST00000530199 MYOM2P54296 1465 aa10.71□□□□□ -0.69
SVIP-204ENST00000530199 ADAMTS13Q76LX8 1427 aa10.71□□□□□ -0.69
SVIP-204ENST00000530199 TPCN2Q8NHX9 752 aa10.71□□□□□ -0.69
SVIP-204ENST00000530199 RBM19Q9Y4C8 960 aaKnown RBP10.71□□□□□ -0.69
SVIP-204ENST00000530199 DISP2A7MBM2 1401 aa10.7□□□□□ -0.7
SVIP-204ENST00000530199 NOS1P29475 1434 aa10.7□□□□□ -0.7
SVIP-204ENST00000530199 RPIAP49247 311 aa10.7□□□□□ -0.7
SVIP-204ENST00000530199 RAB15P59190 212 aa10.7□□□□□ -0.7
SVIP-204ENST00000530199 PSME1Q06323 249 aa10.7□□□□□ -0.7
SVIP-204ENST00000530199 VASH1Q7L8A9 365 aaPredicted RBP10.7□□□□□ -0.7
SVIP-204ENST00000530199 RNF166Q96A37 237 aaPredicted RBP10.7□□□□□ -0.7
SVIP-204ENST00000530199 EHBP1L1Q8N3D4 1523 aa10.69□□□□□ -0.7
SVIP-204ENST00000530199 CCDC27Q2M243 656 aa10.69□□□□□ -0.7
SVIP-204ENST00000530199 INTS6LQ5JSJ4 861 aaKnown RBP10.69□□□□□ -0.7
SVIP-204ENST00000530199 PPP1R18Q6NYC8 613 aa10.69□□□□□ -0.7
SVIP-204ENST00000530199 SLC52A1Q9NWF4 448 aa10.69□□□□□ -0.7
SVIP-204ENST00000530199 TRPM2O94759 1503 aa10.68□□□□□ -0.7
SVIP-204ENST00000530199 SFI1A8K8P3 1242 aa10.68□□□□□ -0.7
SVIP-204ENST00000530199 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.68□□□□□ -0.7
SVIP-204ENST00000530199 CEP162Q5TB80 1403 aa10.67□□□□□ -0.7
SVIP-204ENST00000530199 MARF1Q9Y4F3 1742 aaKnown RBP10.67□□□□□ -0.7
SVIP-204ENST00000530199 ERVH48-1M5A8F1 160 aa10.67□□□□□ -0.7
SVIP-204ENST00000530199 MYCP01106 439 aaPredicted RBP10.67□□□□□ -0.7
SVIP-204ENST00000530199 KRT27Q7Z3Y8 459 aa10.67□□□□□ -0.7
SVIP-204ENST00000530199 UNC5CLQ8IV45 518 aa10.67□□□□□ -0.7
SVIP-204ENST00000530199 EHBP1Q8NDI1 1231 aa10.67□□□□□ -0.7
SVIP-204ENST00000530199 C1orf216Q8TAB5 229 aa10.67□□□□□ -0.7
SVIP-204ENST00000530199 AMOTL2Q9Y2J4 779 aa10.67□□□□□ -0.7
SVIP-204ENST00000530199 SLIT2O94813 1529 aa10.67□□□□□ -0.7
SVIP-204ENST00000530199 LMTK2Q8IWU2 1503 aa10.67□□□□□ -0.7
SVIP-204ENST00000530199 RIMS2Q9UQ26 1411 aa10.67□□□□□ -0.7
SVIP-204ENST00000530199 PRMT3O60678 531 aa10.66□□□□□ -0.7
SVIP-204ENST00000530199 CD2BP2O95400 341 aaKnown RBP10.66□□□□□ -0.7
SVIP-204ENST00000530199 OCLNQ16625 522 aa10.66□□□□□ -0.7
SVIP-204ENST00000530199 CDK15Q96Q40 435 aa10.66□□□□□ -0.7
SVIP-204ENST00000530199 DUOX2Q9NRD8 1548 aa10.66□□□□□ -0.7
SVIP-204ENST00000530199 PTPRUQ92729 1446 aa10.66□□□□□ -0.7
SVIP-204ENST00000530199 SCTRP47872 440 aa10.65□□□□□ -0.7
SVIP-204ENST00000530199 RC3H1Q5TC82 1133 aaKnown RBP10.65□□□□□ -0.7
SVIP-204ENST00000530199 RPRD2Q5VT52 1461 aaKnown RBP10.65□□□□□ -0.7
SVIP-204ENST00000530199 ERVK-9P63128 1117 aa10.64□□□□□ -0.71
SVIP-204ENST00000530199 ARID5BQ14865 1188 aa10.64□□□□□ -0.71
SVIP-204ENST00000530199 FOXD4L5Q5VV16 416 aaPredicted RBP10.64□□□□□ -0.71
SVIP-204ENST00000530199 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.64□□□□□ -0.71
SVIP-204ENST00000530199 FOXD4L4Q8WXT5 416 aaPredicted RBP10.64□□□□□ -0.71
SVIP-204ENST00000530199 PRIMPOLQ96LW4 560 aa10.64□□□□□ -0.71
SVIP-204ENST00000530199 CXXC1Q9P0U4 656 aaPredicted RBP10.64□□□□□ -0.71
SVIP-204ENST00000530199 RGPD1P0DJD0 1748 aa10.64□□□□□ -0.71
SVIP-204ENST00000530199 C1orf167Q5SNV9 1468 aa10.63□□□□□ -0.71
SVIP-204ENST00000530199 M0R2N6 131 aa10.63□□□□□ -0.71
SVIP-204ENST00000530199 SCNN1AP37088 669 aa10.63□□□□□ -0.71
SVIP-204ENST00000530199 GRM5P41594 1212 aa10.63□□□□□ -0.71
SVIP-204ENST00000530199 ADGRL3Q9HAR2 1447 aa10.63□□□□□ -0.71
SVIP-204ENST00000530199 XRN1Q8IZH2 1706 aaKnown RBP10.62□□□□□ -0.71
SVIP-204ENST00000530199 ERBINQ96RT1 1412 aa10.62□□□□□ -0.71
SVIP-204ENST00000530199 SERPINB4P48594 390 aa10.62□□□□□ -0.71
SVIP-204ENST00000530199 TAS1R3Q7RTX0 852 aa10.62□□□□□ -0.71
SVIP-204ENST00000530199 SPNS2Q8IVW8 549 aa10.62□□□□□ -0.71
SVIP-204ENST00000530199 MPNDQ8N594 471 aa10.62□□□□□ -0.71
SVIP-204ENST00000530199 HINFPQ9BQA5 517 aa10.62□□□□□ -0.71
SVIP-204ENST00000530199 SPON1Q9HCB6 807 aa10.62□□□□□ -0.71
SVIP-204ENST00000530199 PPP1R1BQ9UD71 204 aaPredicted RBP10.62□□□□□ -0.71
SVIP-204ENST00000530199 CAMTA1Q9Y6Y1 1673 aa10.62□□□□□ -0.71
SVIP-204ENST00000530199 FSHRP23945 695 aa10.61□□□□□ -0.71
SVIP-204ENST00000530199 VPS72Q15906 364 aa10.61□□□□□ -0.71
SVIP-204ENST00000530199 CC2D2BQ6DHV5 1058 aa10.61□□□□□ -0.71
SVIP-204ENST00000530199 LIAT1Q6ZQX7 453 aa10.61□□□□□ -0.71
SVIP-204ENST00000530199 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.61□□□□□ -0.71
SVIP-204ENST00000530199 TSEN2Q8NCE0 465 aaKnown RBP10.61□□□□□ -0.71
SVIP-204ENST00000530199 PARD3Q8TEW0 1356 aa10.61□□□□□ -0.71
SVIP-204ENST00000530199 TMEM131LA2VDJ0 1609 aa10.6□□□□□ -0.71
SVIP-204ENST00000530199 SOWAHDA6NJG2 315 aa10.6□□□□□ -0.71
SVIP-204ENST00000530199 SIAH2O43255 324 aa10.6□□□□□ -0.71
SVIP-204ENST00000530199 LGR5O75473 907 aa10.6□□□□□ -0.71
SVIP-204ENST00000530199 DHX9Q08211 1270 aaKnown RBP10.6□□□□□ -0.71
SVIP-204ENST00000530199 EMID1Q96A84 441 aaPredicted RBP10.6□□□□□ -0.71
SVIP-204ENST00000530199 TMPRSS4Q9NRS4 437 aa10.6□□□□□ -0.71
SVIP-204ENST00000530199 TLL2Q9Y6L7 1015 aa10.6□□□□□ -0.71
SVIP-204ENST00000530199 KANK1Q14678 1352 aa10.6□□□□□ -0.71
SVIP-204ENST00000530199 KCNQ2O43526 872 aa10.59□□□□□ -0.71
SVIP-204ENST00000530199 WEE1P30291 646 aa10.59□□□□□ -0.71
SVIP-204ENST00000530199 EZH2Q15910 746 aaKnown RBP10.59□□□□□ -0.71
SVIP-204ENST00000530199 CAMKK2Q96RR4 588 aa10.59□□□□□ -0.71
SVIP-204ENST00000530199 OSBPL3Q9H4L5 887 aa10.59□□□□□ -0.71
SVIP-204ENST00000530199 ZNF358Q9NW07 568 aa10.59□□□□□ -0.71
SVIP-204ENST00000530199 MYO5BQ9ULV0 1848 aa10.58□□□□□ -0.72
SVIP-204ENST00000530199 TMEM229AB2RXF0 380 aa10.58□□□□□ -0.72
SVIP-204ENST00000530199 CYLDQ9NQC7 956 aa10.58□□□□□ -0.72
SVIP-204ENST00000530199 CHD4Q14839 1912 aa10.58□□□□□ -0.72
SVIP-204ENST00000530199 TNS1Q9HBL0 1735 aaKnown RBP10.58□□□□□ -0.72
SVIP-204ENST00000530199 ADH1CP00326 375 aa10.57□□□□□ -0.72
SVIP-204ENST00000530199 ORAI2Q96SN7 254 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms