RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 TTLL6Q8N841 843 aa16.27■□□□□ 0.2
CCDC90B-216ENST00000529856 DLEC1Q9Y238 1755 aa16.27■□□□□ 0.2
CCDC90B-216ENST00000529856 CACNA1FO60840 1977 aa16.27■□□□□ 0.19
CCDC90B-216ENST00000529856 CHD4Q14839 1912 aa16.27■□□□□ 0.19
CCDC90B-216ENST00000529856 TRIM28Q13263 835 aaKnown RBP16.26■□□□□ 0.19
CCDC90B-216ENST00000529856 SLC10A5Q5PT55 438 aa16.26■□□□□ 0.19
CCDC90B-216ENST00000529856 STYK1Q6J9G0 422 aa16.26■□□□□ 0.19
CCDC90B-216ENST00000529856 KSR2Q6VAB6 950 aa16.26■□□□□ 0.19
CCDC90B-216ENST00000529856 ZNF622Q969S3 477 aaKnown RBP eCLIP16.26■□□□□ 0.19
CCDC90B-216ENST00000529856 ABCC12Q96J65 1359 aa16.26■□□□□ 0.19
CCDC90B-216ENST00000529856 ARFGEF1Q9Y6D6 1849 aa16.25■□□□□ 0.19
CCDC90B-216ENST00000529856 ATP5J2-PTCD1G3V325 749 aa16.25■□□□□ 0.19
CCDC90B-216ENST00000529856 MASTLQ96GX5 879 aa16.25■□□□□ 0.19
CCDC90B-216ENST00000529856 ARFGEF2Q9Y6D5 1785 aa16.25■□□□□ 0.19
CCDC90B-216ENST00000529856 COL11A2P13942 1736 aaPredicted RBP16.25■□□□□ 0.19
CCDC90B-216ENST00000529856 RNF123Q5XPI4 1314 aa16.24■□□□□ 0.19
CCDC90B-216ENST00000529856 PI4KAP2A4QPH2 592 aa16.24■□□□□ 0.19
CCDC90B-216ENST00000529856 NPR1P16066 1061 aa16.24■□□□□ 0.19
CCDC90B-216ENST00000529856 YY1P25490 414 aa16.24■□□□□ 0.19
CCDC90B-216ENST00000529856 FLIIQ13045 1269 aa16.24■□□□□ 0.19
CCDC90B-216ENST00000529856 PI4KAP1Q8N8J0 262 aa16.24■□□□□ 0.19
CCDC90B-216ENST00000529856 CNKSR1Q969H4 720 aa16.24■□□□□ 0.19
CCDC90B-216ENST00000529856 METTL22Q9BUU2 404 aaPredicted RBP16.24■□□□□ 0.19
CCDC90B-216ENST00000529856 TRMT112Q9UI30 125 aaKnown RBP16.24■□□□□ 0.19
CCDC90B-216ENST00000529856 MAP3K2Q9Y2U5 619 aa16.24■□□□□ 0.19
CCDC90B-216ENST00000529856 RIC1Q4ADV7 1423 aa16.24■□□□□ 0.19
CCDC90B-216ENST00000529856 CRY2Q49AN0 593 aa16.23■□□□□ 0.19
CCDC90B-216ENST00000529856 ARHGAP27Q6ZUM4 889 aa16.23■□□□□ 0.19
CCDC90B-216ENST00000529856 MYD88Q99836 296 aa16.23■□□□□ 0.19
CCDC90B-216ENST00000529856 ADCY9O60503 1353 aa16.23■□□□□ 0.19
CCDC90B-216ENST00000529856 SH3TC1Q8TE82 1336 aa16.22■□□□□ 0.19
CCDC90B-216ENST00000529856 HNRNPUQ00839 825 aaKnown RBP eCLIP16.22■□□□□ 0.19
CCDC90B-216ENST00000529856 SYNE4Q8N205 404 aa16.22■□□□□ 0.19
CCDC90B-216ENST00000529856 NLRP3Q96P20 1036 aa16.22■□□□□ 0.19
CCDC90B-216ENST00000529856 TNRC6CQ9HCJ0 1690 aaKnown RBP16.21■□□□□ 0.19
CCDC90B-216ENST00000529856 FKBP5Q13451 457 aaPredicted RBP16.21■□□□□ 0.19
CCDC90B-216ENST00000529856 CCDC191Q8NCU4 936 aa16.21■□□□□ 0.19
CCDC90B-216ENST00000529856 ZNF428Q96B54 188 aa16.21■□□□□ 0.19
CCDC90B-216ENST00000529856 HCLS1P14317 486 aaPredicted RBP16.2■□□□□ 0.18
CCDC90B-216ENST00000529856 HOXA10P31260 410 aaPredicted RBP16.2■□□□□ 0.18
CCDC90B-216ENST00000529856 PRPF40BQ6NWY9 871 aaKnown RBP16.2■□□□□ 0.18
CCDC90B-216ENST00000529856 C3orf67Q6ZVT6 689 aa16.2■□□□□ 0.18
CCDC90B-216ENST00000529856 FAM89AQ96GI7 184 aa16.2■□□□□ 0.18
CCDC90B-216ENST00000529856 SLX4Q8IY92 1834 aa16.19■□□□□ 0.18
CCDC90B-216ENST00000529856 IGKV5-2P06315 115 aa16.19■□□□□ 0.18
CCDC90B-216ENST00000529856 ALDH1B1P30837 517 aa16.19■□□□□ 0.18
CCDC90B-216ENST00000529856 NEXNQ0ZGT2 675 aa16.19■□□□□ 0.18
CCDC90B-216ENST00000529856 ZBTB38Q8NAP3 1195 aaPredicted RBP16.19■□□□□ 0.18
CCDC90B-216ENST00000529856 CWC25Q9NXE8 425 aaPredicted RBP16.19■□□□□ 0.18
CCDC90B-216ENST00000529856 C21orf2O43822 256 aa16.18■□□□□ 0.18
CCDC90B-216ENST00000529856 MRPL50Q8N5N7 158 aaKnown RBP16.18■□□□□ 0.18
CCDC90B-216ENST00000529856 C7orf43Q8WVR3 580 aa16.18■□□□□ 0.18
CCDC90B-216ENST00000529856 DNAAF4Q8WXU2 420 aa16.18■□□□□ 0.18
CCDC90B-216ENST00000529856 RPGRQ92834 1020 aaKnown RBP16.18■□□□□ 0.18
CCDC90B-216ENST00000529856 RBM17Q96I25 401 aaKnown RBP16.18■□□□□ 0.18
CCDC90B-216ENST00000529856 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
CCDC90B-216ENST00000529856 PCCAP05165 728 aaPredicted RBP16.17■□□□□ 0.18
CCDC90B-216ENST00000529856 CT47B1P0C2W7 299 aaPredicted RBP16.17■□□□□ 0.18
CCDC90B-216ENST00000529856 RTL5Q5HYW3 569 aaPredicted RBP16.17■□□□□ 0.18
CCDC90B-216ENST00000529856 CRAMP1Q96RY5 1269 aa16.17■□□□□ 0.18
CCDC90B-216ENST00000529856 CACNA1SQ13698 1873 aa16.16■□□□□ 0.18
CCDC90B-216ENST00000529856 NEURL1BA8MQ27 555 aa16.16■□□□□ 0.18
CCDC90B-216ENST00000529856 IRS4O14654 1257 aaPredicted RBP16.16■□□□□ 0.18
CCDC90B-216ENST00000529856 CWF19L2Q2TBE0 894 aaKnown RBP16.16■□□□□ 0.18
CCDC90B-216ENST00000529856 ALDH1L2Q3SY69 923 aa16.16■□□□□ 0.18
CCDC90B-216ENST00000529856 SSH1Q8WYL5 1049 aa16.16■□□□□ 0.18
CCDC90B-216ENST00000529856 LAMB2P55268 1798 aa16.15■□□□□ 0.18
CCDC90B-216ENST00000529856 F6X3S4 739 aa16.15■□□□□ 0.18
CCDC90B-216ENST00000529856 SF3B3Q15393 1217 aaKnown RBP16.15■□□□□ 0.18
CCDC90B-216ENST00000529856 SOGA3Q5TF21 947 aa16.15■□□□□ 0.18
CCDC90B-216ENST00000529856 DDX60Q8IY21 1712 aaKnown RBP16.15■□□□□ 0.18
CCDC90B-216ENST00000529856 LINS1Q8NG48 757 aa16.15■□□□□ 0.18
CCDC90B-216ENST00000529856 NFKBIEO00221 500 aa16.14■□□□□ 0.17
CCDC90B-216ENST00000529856 HSP90B1P14625 803 aaKnown RBP16.14■□□□□ 0.17
CCDC90B-216ENST00000529856 JARID2Q92833 1246 aaPredicted RBP16.14■□□□□ 0.17
CCDC90B-216ENST00000529856 SBF1O95248 1867 aa16.14■□□□□ 0.17
CCDC90B-216ENST00000529856 H7C1W4 665 aa16.13■□□□□ 0.17
CCDC90B-216ENST00000529856 RASSF7Q02833 373 aa16.13■□□□□ 0.17
CCDC90B-216ENST00000529856 GCKRQ14397 625 aa16.13■□□□□ 0.17
CCDC90B-216ENST00000529856 BEND3Q5T5X7 828 aa16.13■□□□□ 0.17
CCDC90B-216ENST00000529856 C9orf131Q5VYM1 1079 aa16.13■□□□□ 0.17
CCDC90B-216ENST00000529856 DDX46Q7L014 1031 aaKnown RBP16.13■□□□□ 0.17
CCDC90B-216ENST00000529856 ZBED9Q6R2W3 1325 aa16.13■□□□□ 0.17
CCDC90B-216ENST00000529856 CDHR2Q9BYE9 1310 aa16.13■□□□□ 0.17
CCDC90B-216ENST00000529856 FER1L6Q2WGJ9 1857 aa16.12■□□□□ 0.17
CCDC90B-216ENST00000529856 PDE8AO60658 829 aa16.12■□□□□ 0.17
CCDC90B-216ENST00000529856 BBOX1O75936 387 aa16.12■□□□□ 0.17
CCDC90B-216ENST00000529856 CCDC93Q567U6 631 aa16.12■□□□□ 0.17
CCDC90B-216ENST00000529856 OLFM4Q6UX06 510 aa16.12■□□□□ 0.17
CCDC90B-216ENST00000529856 ZNF784Q8NCA9 323 aaPredicted RBP16.12■□□□□ 0.17
CCDC90B-216ENST00000529856 BCL2L13Q9BXK5 485 aa16.12■□□□□ 0.17
CCDC90B-216ENST00000529856 ABCC4O15439 1325 aa16.12■□□□□ 0.17
CCDC90B-216ENST00000529856 PTPRCP08575 1304 aa16.12■□□□□ 0.17
CCDC90B-216ENST00000529856 LMNB1P20700 586 aa16.11■□□□□ 0.17
CCDC90B-216ENST00000529856 PRELPP51888 382 aa16.11■□□□□ 0.17
CCDC90B-216ENST00000529856 CC2D2BQ6DHV5 1058 aa16.11■□□□□ 0.17
CCDC90B-216ENST00000529856 RTKN2Q8IZC4 609 aa16.11■□□□□ 0.17
CCDC90B-216ENST00000529856 SMC4Q9NTJ3 1288 aa16.11■□□□□ 0.17
CCDC90B-216ENST00000529856 RNF181Q9P0P0 153 aa16.11■□□□□ 0.17
CCDC90B-216ENST00000529856 LTBP3Q9NS15 1303 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms