RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 TMEM88BA6NKF7 163 aa8.62□□□□□ -1.03
C11orf88-204ENST00000529661 C16orf46Q6P387 395 aa8.62□□□□□ -1.03
C11orf88-204ENST00000529661 C1orf229Q6ZS94 237 aaPredicted RBP8.62□□□□□ -1.03
C11orf88-204ENST00000529661 RAB44Q7Z6P3 723 aaPredicted RBP8.62□□□□□ -1.03
C11orf88-204ENST00000529661 EDARADDQ8WWZ3 215 aa8.62□□□□□ -1.03
C11orf88-204ENST00000529661 IFT43Q96FT9 208 aa8.62□□□□□ -1.03
C11orf88-204ENST00000529661 SLC30A3Q99726 388 aa8.62□□□□□ -1.03
C11orf88-204ENST00000529661 SHISA8B8ZZ34 492 aa8.61□□□□□ -1.03
C11orf88-204ENST00000529661 RNF225M0QZC1 329 aaPredicted RBP8.61□□□□□ -1.03
C11orf88-204ENST00000529661 PTCD1O75127 700 aaKnown RBP8.61□□□□□ -1.03
C11orf88-204ENST00000529661 AMPD1P23109 780 aa8.61□□□□□ -1.03
C11orf88-204ENST00000529661 IDH3AP50213 366 aa8.61□□□□□ -1.03
C11orf88-204ENST00000529661 SYT9Q86SS6 491 aa8.61□□□□□ -1.03
C11orf88-204ENST00000529661 LRRC4BQ9NT99 713 aa8.61□□□□□ -1.03
C11orf88-204ENST00000529661 KLF15Q9UIH9 416 aa8.61□□□□□ -1.03
C11orf88-204ENST00000529661 MICAL2O94851 1124 aa8.6□□□□□ -1.03
C11orf88-204ENST00000529661 KCNQ4P56696 695 aa8.6□□□□□ -1.03
C11orf88-204ENST00000529661 RASSF7Q02833 373 aa8.6□□□□□ -1.03
C11orf88-204ENST00000529661 NEUROD1Q13562 356 aa8.6□□□□□ -1.03
C11orf88-204ENST00000529661 COL26A1Q96A83 441 aa8.6□□□□□ -1.03
C11orf88-204ENST00000529661 AVENQ9NQS1 362 aaPredicted RBP8.6□□□□□ -1.03
C11orf88-204ENST00000529661 DMGDHQ9UI17 866 aaKnown RBP8.6□□□□□ -1.03
C11orf88-204ENST00000529661 EPXP11678 715 aa8.59□□□□□ -1.03
C11orf88-204ENST00000529661 EPB42P16452 691 aa8.59□□□□□ -1.03
C11orf88-204ENST00000529661 IRS1P35568 1242 aa8.59□□□□□ -1.03
C11orf88-204ENST00000529661 SCNN1AP37088 669 aa8.59□□□□□ -1.03
C11orf88-204ENST00000529661 FCHSD1Q86WN1 690 aa8.59□□□□□ -1.03
C11orf88-204ENST00000529661 BHMTQ93088 406 aa8.59□□□□□ -1.03
C11orf88-204ENST00000529661 RRAGCQ9HB90 399 aa8.59□□□□□ -1.03
C11orf88-204ENST00000529661 SEPT3Q9UH03 358 aa8.59□□□□□ -1.03
C11orf88-204ENST00000529661 INPP5BP32019 993 aa8.58□□□□□ -1.04
C11orf88-204ENST00000529661 ARSDP51689 593 aa8.58□□□□□ -1.04
C11orf88-204ENST00000529661 TREML1Q86YW5 311 aa8.58□□□□□ -1.04
C11orf88-204ENST00000529661 SCARF2Q96GP6 870 aaPredicted RBP8.58□□□□□ -1.04
C11orf88-204ENST00000529661 PNMA5Q96PV4 448 aa8.57□□□□□ -1.04
C11orf88-204ENST00000529661 USP20Q9Y2K6 914 aa8.57□□□□□ -1.04
C11orf88-204ENST00000529661 GDF11O95390 407 aa8.56□□□□□ -1.04
C11orf88-204ENST00000529661 BRD2P25440 801 aaKnown RBP8.56□□□□□ -1.04
C11orf88-204ENST00000529661 SSFA2P28290 1259 aa8.56□□□□□ -1.04
C11orf88-204ENST00000529661 PODNQ7Z5L7 613 aa8.56□□□□□ -1.04
C11orf88-204ENST00000529661 ETFBKMTQ8IXQ9 262 aa8.56□□□□□ -1.04
C11orf88-204ENST00000529661 RGL4Q8IZJ4 473 aa8.56□□□□□ -1.04
C11orf88-204ENST00000529661 TMEM151AQ8N4L1 468 aa8.56□□□□□ -1.04
C11orf88-204ENST00000529661 CNTNAP5Q8WYK1 1306 aa8.55□□□□□ -1.04
C11orf88-204ENST00000529661 TNFRSF10BO14763 440 aa8.55□□□□□ -1.04
C11orf88-204ENST00000529661 OPLAHO14841 1288 aa8.55□□□□□ -1.04
C11orf88-204ENST00000529661 SIN3BO75182 1162 aa8.55□□□□□ -1.04
C11orf88-204ENST00000529661 GRNP28799 593 aaKnown RBP8.55□□□□□ -1.04
C11orf88-204ENST00000529661 TBC1D8BQ0IIM8 1120 aa8.55□□□□□ -1.04
C11orf88-204ENST00000529661 BTBD6Q96KE9 485 aa8.55□□□□□ -1.04
C11orf88-204ENST00000529661 IGFLR1Q9H665 355 aa8.55□□□□□ -1.04
C11orf88-204ENST00000529661 USTQ9Y2C2 406 aa8.55□□□□□ -1.04
C11orf88-204ENST00000529661 RTCBQ9Y3I0 505 aaKnown RBP8.55□□□□□ -1.04
C11orf88-204ENST00000529661 NFKB1P19838 968 aa8.54□□□□□ -1.04
C11orf88-204ENST00000529661 SNRPNP63162 240 aaKnown RBP8.54□□□□□ -1.04
C11orf88-204ENST00000529661 CCINQ13939 588 aa8.54□□□□□ -1.04
C11orf88-204ENST00000529661 FAM26DQ5JW98 314 aa8.54□□□□□ -1.04
C11orf88-204ENST00000529661 KRT25Q7Z3Z0 450 aa8.54□□□□□ -1.04
C11orf88-204ENST00000529661 KCTD17Q8N5Z5 321 aa8.54□□□□□ -1.04
C11orf88-204ENST00000529661 GSX2Q9BZM3 304 aa8.54□□□□□ -1.04
C11orf88-204ENST00000529661 ELOA3CA0A087WX78 387 aaPredicted RBP8.53□□□□□ -1.04
C11orf88-204ENST00000529661 ELOA3DA6NLF2 546 aaPredicted RBP8.53□□□□□ -1.04
C11orf88-204ENST00000529661 ALAS2P22557 587 aa8.53□□□□□ -1.04
C11orf88-204ENST00000529661 ELOA3BQ3SY89 546 aa8.53□□□□□ -1.04
C11orf88-204ENST00000529661 KANK3Q6NY19 840 aa8.53□□□□□ -1.04
C11orf88-204ENST00000529661 CHSY3Q70JA7 882 aa8.53□□□□□ -1.04
C11orf88-204ENST00000529661 CMTR1Q8N1G2 835 aaKnown RBP8.53□□□□□ -1.04
C11orf88-204ENST00000529661 BEND7Q8N7W2 519 aaPredicted RBP8.53□□□□□ -1.04
C11orf88-204ENST00000529661 RETREG2Q8NC44 543 aa8.53□□□□□ -1.04
C11orf88-204ENST00000529661 ELOA3Q8NG57 546 aa8.53□□□□□ -1.04
C11orf88-204ENST00000529661 STIM2Q9P246 746 aa8.53□□□□□ -1.04
C11orf88-204ENST00000529661 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.53□□□□□ -1.04
C11orf88-204ENST00000529661 ADH7P40394 386 aa8.52□□□□□ -1.05
C11orf88-204ENST00000529661 UBE2OQ9C0C9 1292 aaKnown RBP8.52□□□□□ -1.05
C11orf88-204ENST00000529661 ADARB2-AS1A8MUL3 147 aa8.51□□□□□ -1.05
C11orf88-204ENST00000529661 PHF20L1A8MW92 1017 aa8.51□□□□□ -1.05
C11orf88-204ENST00000529661 HOXB4P17483 251 aaPredicted RBP8.51□□□□□ -1.05
C11orf88-204ENST00000529661 ABTB2Q8N961 1025 aa8.51□□□□□ -1.05
C11orf88-204ENST00000529661 GTF3C2Q8WUA4 911 aaPredicted RBP8.51□□□□□ -1.05
C11orf88-204ENST00000529661 TNFRSF25Q93038 417 aa8.51□□□□□ -1.05
C11orf88-204ENST00000529661 ZBTB39O15060 712 aa8.5□□□□□ -1.05
C11orf88-204ENST00000529661 XYLBO75191 536 aa8.5□□□□□ -1.05
C11orf88-204ENST00000529661 SASH3O75995 380 aa8.5□□□□□ -1.05
C11orf88-204ENST00000529661 TARSP26639 723 aaKnown RBP8.5□□□□□ -1.05
C11orf88-204ENST00000529661 ZAP70P43403 619 aa8.5□□□□□ -1.05
C11orf88-204ENST00000529661 PHLDB3Q6NSJ2 640 aa8.5□□□□□ -1.05
C11orf88-204ENST00000529661 HELQQ8TDG4 1101 aa8.5□□□□□ -1.05
C11orf88-204ENST00000529661 EFCC1Q9HA90 598 aa8.5□□□□□ -1.05
C11orf88-204ENST00000529661 MKL2Q9ULH7 1088 aa8.5□□□□□ -1.05
C11orf88-204ENST00000529661 MTMR7Q9Y216 660 aa8.5□□□□□ -1.05
C11orf88-204ENST00000529661 RARAP10276 462 aa8.49□□□□□ -1.05
C11orf88-204ENST00000529661 MTMR3Q13615 1198 aa8.49□□□□□ -1.05
C11orf88-204ENST00000529661 B4GALNT3Q6L9W6 998 aa8.49□□□□□ -1.05
C11orf88-204ENST00000529661 GPR152Q8TDT2 470 aa8.49□□□□□ -1.05
C11orf88-204ENST00000529661 PIK3R5Q8WYR1 880 aa8.49□□□□□ -1.05
C11orf88-204ENST00000529661 MDFIQ99750 246 aa8.49□□□□□ -1.05
C11orf88-204ENST00000529661 ABL1P00519 1130 aa8.48□□□□□ -1.05
C11orf88-204ENST00000529661 DGKGP49619 791 aa8.48□□□□□ -1.05
C11orf88-204ENST00000529661 DNAJB12Q9NXW2 375 aaKnown RBP8.48□□□□□ -1.05
C11orf88-204ENST00000529661 FAM13BQ9NYF5 915 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms