RNA–Protein interactions for RNA: ENST00000529619.5

PCDHA5-201, Transcript of protocadherin alpha 5, humanhuman

TSL 1 (best) BASIC

Gene PCDHA5, Length 4,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5-201ENST00000529619 HMG20BQ9P0W2 317 aa17■□□□□ 0.31
PCDHA5-201ENST00000529619 CTNNA3Q9UI47 895 aa17■□□□□ 0.31
PCDHA5-201ENST00000529619 ARAP3Q8WWN8 1544 aa17■□□□□ 0.31
PCDHA5-201ENST00000529619 FAM177A1Q8N128 213 aaPredicted RBP17■□□□□ 0.31
PCDHA5-201ENST00000529619 KLHDC4Q8TBB5 520 aa17■□□□□ 0.31
PCDHA5-201ENST00000529619 PRR36Q9H6K5 1346 aa17■□□□□ 0.31
PCDHA5-201ENST00000529619 FAM227BQ96M60 508 aa17■□□□□ 0.31
PCDHA5-201ENST00000529619 ATP7BP35670 1465 aa17■□□□□ 0.31
PCDHA5-201ENST00000529619 TPM1P09493 284 aa16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 TYRO3Q06418 890 aa16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 RAB11FIP4Q86YS3 637 aa16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 SSH3Q8TE77 659 aa16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 DNAJC25Q9H1X3 360 aa16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 ANO10Q9NW15 660 aa16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 TULP4Q9NRJ4 1543 aa16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 PTPN14Q15678 1187 aa16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 OSBPL3Q9H4L5 887 aa16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 ADGRB3O60242 1522 aa16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 HAND2P61296 217 aa16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 IMMTQ16891 758 aaKnown RBP16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 CCAR1Q8IX12 1150 aaKnown RBP16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 JMYQ8N9B5 988 aa16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 ZBTB3Q9H5J0 574 aa16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 BICC1Q9H694 974 aaKnown RBP16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 CEP152O94986 1710 aa16.99■□□□□ 0.31
PCDHA5-201ENST00000529619 Q6ZUG5 572 aa16.98■□□□□ 0.31
PCDHA5-201ENST00000529619 LUZP1Q86V48 1076 aa16.98■□□□□ 0.31
PCDHA5-201ENST00000529619 C8orf76Q96K31 380 aa16.98■□□□□ 0.31
PCDHA5-201ENST00000529619 NSFL1CQ9UNZ2 370 aaKnown RBP16.98■□□□□ 0.31
PCDHA5-201ENST00000529619 BIN1O00499 593 aa16.98■□□□□ 0.31
PCDHA5-201ENST00000529619 ARGLU1Q9NWB6 273 aaPredicted RBP16.98■□□□□ 0.31
PCDHA5-201ENST00000529619 IQSEC2Q5JU85 1478 aa16.98■□□□□ 0.31
PCDHA5-201ENST00000529619 KCNQ3O43525 872 aa16.98■□□□□ 0.31
PCDHA5-201ENST00000529619 IDH1O75874 414 aaKnown RBP16.98■□□□□ 0.31
PCDHA5-201ENST00000529619 HMGB1P09429 215 aaKnown RBP16.98■□□□□ 0.31
PCDHA5-201ENST00000529619 AOX1Q06278 1338 aa16.98■□□□□ 0.31
PCDHA5-201ENST00000529619 PPP4R3BQ5MIZ7 849 aa16.98■□□□□ 0.31
PCDHA5-201ENST00000529619 KIF6Q6ZMV9 814 aa16.98■□□□□ 0.31
PCDHA5-201ENST00000529619 PNPLA6Q8IY17 1366 aa16.98■□□□□ 0.31
PCDHA5-201ENST00000529619 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.98■□□□□ 0.31
PCDHA5-201ENST00000529619 IBTKQ9P2D0 1353 aaPredicted RBP16.97■□□□□ 0.31
PCDHA5-201ENST00000529619 LTKP29376 864 aa16.97■□□□□ 0.31
PCDHA5-201ENST00000529619 SPDYE4A6NLX3 237 aa16.97■□□□□ 0.31
PCDHA5-201ENST00000529619 PTGS1P23219 599 aa16.97■□□□□ 0.31
PCDHA5-201ENST00000529619 PRDM11Q9NQV5 511 aa16.97■□□□□ 0.31
PCDHA5-201ENST00000529619 POLR3DP05423 398 aaPredicted RBP16.96■□□□□ 0.31
PCDHA5-201ENST00000529619 ARHGEF10O15013 1369 aa16.96■□□□□ 0.31
PCDHA5-201ENST00000529619 NPHP3Q7Z494 1330 aa16.96■□□□□ 0.31
PCDHA5-201ENST00000529619 RASEFQ8IZ41 740 aa16.96■□□□□ 0.31
PCDHA5-201ENST00000529619 IP6K1Q92551 441 aa16.96■□□□□ 0.31
PCDHA5-201ENST00000529619 HECW2Q9P2P5 1572 aa16.96■□□□□ 0.31
PCDHA5-201ENST00000529619 LMBR1LQ6UX01 489 aa16.96■□□□□ 0.31
PCDHA5-201ENST00000529619 KRT28Q7Z3Y7 464 aa16.96■□□□□ 0.31
PCDHA5-201ENST00000529619 SETBP1Q9Y6X0 1596 aa16.96■□□□□ 0.31
PCDHA5-201ENST00000529619 LRRC7Q96NW7 1537 aa16.96■□□□□ 0.3
PCDHA5-201ENST00000529619 NBPF6Q5VWK0 638 aa16.96■□□□□ 0.3
PCDHA5-201ENST00000529619 VPS37DQ86XT2 251 aa16.96■□□□□ 0.3
PCDHA5-201ENST00000529619 NBPF4Q96M43 638 aa16.96■□□□□ 0.3
PCDHA5-201ENST00000529619 CTAGE5O15320 804 aa16.95■□□□□ 0.3
PCDHA5-201ENST00000529619 EIF4A1P60842 406 aaKnown RBP16.95■□□□□ 0.3
PCDHA5-201ENST00000529619 PTH1RQ03431 593 aa16.95■□□□□ 0.3
PCDHA5-201ENST00000529619 TBX22Q9Y458 520 aa16.95■□□□□ 0.3
PCDHA5-201ENST00000529619 RNMTO43148 476 aaKnown RBP16.95■□□□□ 0.3
PCDHA5-201ENST00000529619 SFPQP23246 707 aaKnown RBP eCLIP16.95■□□□□ 0.3
PCDHA5-201ENST00000529619 SART3Q15020 963 aaKnown RBP16.95■□□□□ 0.3
PCDHA5-201ENST00000529619 TSR1Q2NL82 804 aaKnown RBP16.95■□□□□ 0.3
PCDHA5-201ENST00000529619 CHRNA2Q15822 529 aa16.94■□□□□ 0.3
PCDHA5-201ENST00000529619 TTLL5Q6EMB2 1281 aa16.94■□□□□ 0.3
PCDHA5-201ENST00000529619 ISM2Q6H9L7 571 aa16.94■□□□□ 0.3
PCDHA5-201ENST00000529619 NFATC2IPQ8NCF5 419 aa16.94■□□□□ 0.3
PCDHA5-201ENST00000529619 ZSCAN16Q9H4T2 348 aaPredicted RBP16.94■□□□□ 0.3
PCDHA5-201ENST00000529619 CDK12Q9NYV4 1490 aaPredicted RBP16.94■□□□□ 0.3
PCDHA5-201ENST00000529619 GOLGA8BA8MQT2 603 aa16.94■□□□□ 0.3
PCDHA5-201ENST00000529619 SNRPA1P09661 255 aaKnown RBP16.94■□□□□ 0.3
PCDHA5-201ENST00000529619 STX1AQ16623 288 aa16.94■□□□□ 0.3
PCDHA5-201ENST00000529619 CFAP100Q494V2 611 aa16.94■□□□□ 0.3
PCDHA5-201ENST00000529619 CHST3Q7LGC8 479 aa16.94■□□□□ 0.3
PCDHA5-201ENST00000529619 IFNL2Q8IZJ0 200 aa16.94■□□□□ 0.3
PCDHA5-201ENST00000529619 NDUFB9Q9Y6M9 179 aa16.94■□□□□ 0.3
PCDHA5-201ENST00000529619 SLC27A2O14975 620 aa16.94■□□□□ 0.3
PCDHA5-201ENST00000529619 MCMDC2Q4G0Z9 681 aa16.94■□□□□ 0.3
PCDHA5-201ENST00000529619 STAP2Q9UGK3 403 aa16.94■□□□□ 0.3
PCDHA5-201ENST00000529619 PPRC1Q5VV67 1664 aaKnown RBP16.93■□□□□ 0.3
PCDHA5-201ENST00000529619 BABAM1Q9NWV8 329 aa16.93■□□□□ 0.3
PCDHA5-201ENST00000529619 GCP02774 474 aa16.93■□□□□ 0.3
PCDHA5-201ENST00000529619 CUL4AQ13619 759 aa16.93■□□□□ 0.3
PCDHA5-201ENST00000529619 METTL24Q5JXM2 366 aa16.93■□□□□ 0.3
PCDHA5-201ENST00000529619 SIRT1Q96EB6 747 aa16.93■□□□□ 0.3
PCDHA5-201ENST00000529619 CCDC129Q6ZRS4 1044 aa16.93■□□□□ 0.3
PCDHA5-201ENST00000529619 TMEM2Q9UHN6 1383 aa16.93■□□□□ 0.3
PCDHA5-201ENST00000529619 TFCP2Q12800 502 aa16.92■□□□□ 0.3
PCDHA5-201ENST00000529619 NUP133Q8WUM0 1156 aa16.92■□□□□ 0.3
PCDHA5-201ENST00000529619 SUCLG2Q96I99 432 aa16.92■□□□□ 0.3
PCDHA5-201ENST00000529619 DDX21Q9NR30 783 aaKnown RBP eCLIP16.92■□□□□ 0.3
PCDHA5-201ENST00000529619 ORC3Q9UBD5 711 aaPredicted RBP16.92■□□□□ 0.3
PCDHA5-201ENST00000529619 USP16Q9Y5T5 823 aa16.92■□□□□ 0.3
PCDHA5-201ENST00000529619 ANKRD20A12PQ8NF67 263 aa16.92■□□□□ 0.3
PCDHA5-201ENST00000529619 KIF18AQ8NI77 898 aa16.92■□□□□ 0.3
PCDHA5-201ENST00000529619 TSC1Q92574 1164 aa16.92■□□□□ 0.3
PCDHA5-201ENST00000529619 EDC3Q96F86 508 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms