RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 KCNQ3O43525 872 aa17.83■□□□□ 0.45
USP47-207ENST00000527733 HMGB1P09429 215 aaKnown RBP17.83■□□□□ 0.45
USP47-207ENST00000527733 SLF2Q8IX21 1173 aa17.83■□□□□ 0.45
USP47-207ENST00000527733 C16orf71Q8IYS4 520 aaPredicted RBP17.83■□□□□ 0.45
USP47-207ENST00000527733 RNF123Q5XPI4 1314 aa17.83■□□□□ 0.44
USP47-207ENST00000527733 ZNF213O14771 459 aa17.83■□□□□ 0.44
USP47-207ENST00000527733 PDIA4P13667 645 aaKnown RBP17.83■□□□□ 0.44
USP47-207ENST00000527733 PARP10Q53GL7 1025 aa17.83■□□□□ 0.44
USP47-207ENST00000527733 NAP1L5Q96NT1 182 aaPredicted RBP17.82■□□□□ 0.44
USP47-207ENST00000527733 LDHCP07864 332 aa17.82■□□□□ 0.44
USP47-207ENST00000527733 TRAPPC3LQ5T215 181 aa17.82■□□□□ 0.44
USP47-207ENST00000527733 ZNF622Q969S3 477 aaKnown RBP eCLIP17.82■□□□□ 0.443e-7■■□□□ 12.5
USP47-207ENST00000527733 CCDC87Q9NVE4 849 aa17.82■□□□□ 0.44
USP47-207ENST00000527733 FIBPO43427 364 aa17.82■□□□□ 0.44
USP47-207ENST00000527733 SASS6Q6UVJ0 657 aa17.82■□□□□ 0.44
USP47-207ENST00000527733 ZC3H13Q5T200 1668 aaKnown RBP17.82■□□□□ 0.44
USP47-207ENST00000527733 TTC41PQ6P2S7 1318 aa17.82■□□□□ 0.44
USP47-207ENST00000527733 FAM89AQ96GI7 184 aa17.82■□□□□ 0.44
USP47-207ENST00000527733 ZNF219Q9P2Y4 722 aaPredicted RBP17.82■□□□□ 0.44
USP47-207ENST00000527733 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.81■□□□□ 0.44
USP47-207ENST00000527733 ZFYP08048 801 aaPredicted RBP17.81■□□□□ 0.44
USP47-207ENST00000527733 SDF4Q9BRK5 362 aa17.81■□□□□ 0.44
USP47-207ENST00000527733 LAMC1P11047 1609 aa17.81■□□□□ 0.44
USP47-207ENST00000527733 SH3TC1Q8TE82 1336 aa17.81■□□□□ 0.44
USP47-207ENST00000527733 POLR3DP05423 398 aaPredicted RBP17.81■□□□□ 0.44
USP47-207ENST00000527733 TRMT2AQ8IZ69 625 aaKnown RBP17.81■□□□□ 0.44
USP47-207ENST00000527733 BCORL1Q5H9F3 1711 aa17.81■□□□□ 0.44
USP47-207ENST00000527733 PRPF40AO75400 957 aaKnown RBP17.8■□□□□ 0.44
USP47-207ENST00000527733 TULP4Q9NRJ4 1543 aa17.8■□□□□ 0.44
USP47-207ENST00000527733 ZNF521Q96K83 1311 aa17.8■□□□□ 0.44
USP47-207ENST00000527733 NEXMIFQ5QGS0 1516 aa17.8■□□□□ 0.44
USP47-207ENST00000527733 PES1O00541 588 aaKnown RBP17.8■□□□□ 0.44
USP47-207ENST00000527733 STK38Q15208 465 aa17.8■□□□□ 0.44
USP47-207ENST00000527733 SPTY2D1Q68D10 685 aaPredicted RBP17.8■□□□□ 0.44
USP47-207ENST00000527733 RNF41Q9H4P4 317 aaPredicted RBP17.8■□□□□ 0.44
USP47-207ENST00000527733 USP16Q9Y5T5 823 aa17.8■□□□□ 0.44
USP47-207ENST00000527733 TRAK2O60296 914 aa17.8■□□□□ 0.44
USP47-207ENST00000527733 SH2B1Q9NRF2 756 aaPredicted RBP17.79■□□□□ 0.44
USP47-207ENST00000527733 MKNK2Q9HBH9 465 aa17.79■□□□□ 0.44
USP47-207ENST00000527733 GCKRQ14397 625 aa17.79■□□□□ 0.44
USP47-207ENST00000527733 JMYQ8N9B5 988 aa17.79■□□□□ 0.44
USP47-207ENST00000527733 KRT85P78386 507 aa17.79■□□□□ 0.44
USP47-207ENST00000527733 TBC1D32Q96NH3 1257 aa17.79■□□□□ 0.44
USP47-207ENST00000527733 PTCH1Q13635 1447 aa17.78■□□□□ 0.44
USP47-207ENST00000527733 ERBB4Q15303 1308 aa17.78■□□□□ 0.44
USP47-207ENST00000527733 NBPF7P0C2Y1 421 aaPredicted RBP17.78■□□□□ 0.44
USP47-207ENST00000527733 PLEKHM2Q8IWE5 1019 aa17.77■□□□□ 0.44
USP47-207ENST00000527733 HMG20BQ9P0W2 317 aa17.77■□□□□ 0.44
USP47-207ENST00000527733 TFCP2Q12800 502 aa17.77■□□□□ 0.44
USP47-207ENST00000527733 LIMCH1Q9UPQ0 1083 aa17.77■□□□□ 0.44
USP47-207ENST00000527733 BAG3O95817 575 aa17.77■□□□□ 0.43
USP47-207ENST00000527733 IQCA1Q86XH1 822 aa17.77■□□□□ 0.43
USP47-207ENST00000527733 CCDC83Q8IWF9 413 aa17.77■□□□□ 0.43
USP47-207ENST00000527733 KINO60870 393 aaKnown RBP17.77■□□□□ 0.43
USP47-207ENST00000527733 ABCC4O15439 1325 aa17.76■□□□□ 0.43
USP47-207ENST00000527733 CEBPZQ03701 1054 aaKnown RBP17.76■□□□□ 0.43
USP47-207ENST00000527733 WASF1Q92558 559 aa17.76■□□□□ 0.43
USP47-207ENST00000527733 ESYT1Q9BSJ8 1104 aa17.76■□□□□ 0.43
USP47-207ENST00000527733 EYA2O00167 538 aa17.76■□□□□ 0.43
USP47-207ENST00000527733 CDC42BPGQ6DT37 1551 aa17.76■□□□□ 0.43
USP47-207ENST00000527733 ADAMTS13Q76LX8 1427 aa17.76■□□□□ 0.43
USP47-207ENST00000527733 SOGA3Q5TF21 947 aa17.76■□□□□ 0.43
USP47-207ENST00000527733 PIK3C2BO00750 1634 aa17.75■□□□□ 0.43
USP47-207ENST00000527733 QRICH2Q9H0J4 1663 aa17.75■□□□□ 0.43
USP47-207ENST00000527733 TPM2P07951 284 aa17.75■□□□□ 0.43
USP47-207ENST00000527733 HELBQ8NG08 1087 aaPredicted RBP17.75■□□□□ 0.43
USP47-207ENST00000527733 CCDC43Q96MW1 224 aaKnown RBP17.75■□□□□ 0.43
USP47-207ENST00000527733 DLC1Q96QB1 1528 aa17.75■□□□□ 0.43
USP47-207ENST00000527733 CRACR2BQ8N4Y2 399 aaPredicted RBP17.75■□□□□ 0.43
USP47-207ENST00000527733 ANKRD20A12PQ8NF67 263 aa17.75■□□□□ 0.43
USP47-207ENST00000527733 DDX11Q96FC9 970 aa17.75■□□□□ 0.43
USP47-207ENST00000527733 CCDC196A0A1B0GTZ2 297 aa17.75■□□□□ 0.43
USP47-207ENST00000527733 RANBP6O60518 1105 aaKnown RBP17.75■□□□□ 0.43
USP47-207ENST00000527733 CAVIN1Q6NZI2 390 aaKnown RBP17.75■□□□□ 0.43
USP47-207ENST00000527733 TBC1D2Q9BYX2 928 aa17.75■□□□□ 0.43
USP47-207ENST00000527733 IQSEC3Q9UPP2 1182 aaPredicted RBP17.75■□□□□ 0.43
USP47-207ENST00000527733 PTPRMP28827 1452 aa17.75■□□□□ 0.43
USP47-207ENST00000527733 PDE8AO60658 829 aa17.75■□□□□ 0.43
USP47-207ENST00000527733 PARP3Q9Y6F1 533 aa17.75■□□□□ 0.43
USP47-207ENST00000527733 ZNF853P0CG23 659 aa17.74■□□□□ 0.43
USP47-207ENST00000527733 ZNF444Q8N0Y2 327 aaPredicted RBP17.74■□□□□ 0.43
USP47-207ENST00000527733 IL27Q8NEV9 243 aa17.74■□□□□ 0.43
USP47-207ENST00000527733 SUCLG2Q96I99 432 aa17.74■□□□□ 0.43
USP47-207ENST00000527733 PAG1Q9NWQ8 432 aa17.74■□□□□ 0.43
USP47-207ENST00000527733 USP31Q70CQ4 1352 aa17.74■□□□□ 0.43
USP47-207ENST00000527733 TPM3P06753 285 aa17.74■□□□□ 0.43
USP47-207ENST00000527733 HCLS1P14317 486 aaPredicted RBP17.74■□□□□ 0.43
USP47-207ENST00000527733 ANO8Q9HCE9 1232 aaPredicted RBP17.74■□□□□ 0.43
USP47-207ENST00000527733 TRPC5Q9UL62 973 aaPredicted RBP17.74■□□□□ 0.43
USP47-207ENST00000527733 TCIRG1Q13488 830 aa17.73■□□□□ 0.43
USP47-207ENST00000527733 MCMDC2Q4G0Z9 681 aa17.73■□□□□ 0.43
USP47-207ENST00000527733 ZGPATQ8N5A5 531 aaKnown RBP17.73■□□□□ 0.43
USP47-207ENST00000527733 CNBD1Q8NA66 436 aa17.73■□□□□ 0.43
USP47-207ENST00000527733 NBPF14Q5TI25 921 aa17.73■□□□□ 0.43
USP47-207ENST00000527733 TPM1P09493 284 aa17.73■□□□□ 0.43
USP47-207ENST00000527733 ITGA6P23229 1130 aa17.73■□□□□ 0.43
USP47-207ENST00000527733 SLC9C2Q5TAH2 1124 aa17.73■□□□□ 0.43
USP47-207ENST00000527733 NEK1Q96PY6 1258 aa17.73■□□□□ 0.43
USP47-207ENST00000527733 NEURL1BA8MQ27 555 aa17.72■□□□□ 0.43
USP47-207ENST00000527733 IFIT3O14879 490 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms