RNA–Protein interactions for RNA: ENST00000527551.1

USH1C-206, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 371 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-206ENST00000527551 RARSP54136 660 aaKnown RBP16.28■□□□□ 0.2
USH1C-206ENST00000527551 DNAAF4Q8WXU2 420 aa16.28■□□□□ 0.2
USH1C-206ENST00000527551 SH3TC1Q8TE82 1336 aa16.27■□□□□ 0.2
USH1C-206ENST00000527551 KIF16BQ96L93 1317 aa16.27■□□□□ 0.2
USH1C-206ENST00000527551 DCAF8L1A6NGE4 600 aa16.27■□□□□ 0.2
USH1C-206ENST00000527551 SLC10A5Q5PT55 438 aa16.27■□□□□ 0.2
USH1C-206ENST00000527551 NLGN2Q8NFZ4 835 aa16.27■□□□□ 0.2
USH1C-206ENST00000527551 LINS1Q8NG48 757 aa16.27■□□□□ 0.2
USH1C-206ENST00000527551 MYD88Q99836 296 aa16.27■□□□□ 0.2
USH1C-206ENST00000527551 ARFGEF1Q9Y6D6 1849 aa16.26■□□□□ 0.19
USH1C-206ENST00000527551 COL11A2P13942 1736 aaPredicted RBP16.26■□□□□ 0.19
USH1C-206ENST00000527551 KLRG2A4D1S0 409 aaPredicted RBP16.26■□□□□ 0.19
USH1C-206ENST00000527551 H0YIN7 160 aa16.26■□□□□ 0.19
USH1C-206ENST00000527551 CWC25Q9NXE8 425 aaPredicted RBP16.26■□□□□ 0.19
USH1C-206ENST00000527551 TRMT112Q9UI30 125 aaKnown RBP16.26■□□□□ 0.19
USH1C-206ENST00000527551 FAM177BA6PVY3 158 aa16.25■□□□□ 0.19
USH1C-206ENST00000527551 ATP5J2-PTCD1G3V325 749 aa16.25■□□□□ 0.19
USH1C-206ENST00000527551 ERFEQ4G0M1 354 aa16.25■□□□□ 0.19
USH1C-206ENST00000527551 ARHGAP45Q92619 1136 aa16.25■□□□□ 0.19
USH1C-206ENST00000527551 DDX60Q8IY21 1712 aaKnown RBP16.25■□□□□ 0.19
USH1C-206ENST00000527551 TNRC6CQ9HCJ0 1690 aaKnown RBP16.24■□□□□ 0.19
USH1C-206ENST00000527551 A0A0G2JLW4 131 aa16.24■□□□□ 0.19
USH1C-206ENST00000527551 IGKV5-2P06315 115 aa16.24■□□□□ 0.19
USH1C-206ENST00000527551 DPEP1P16444 411 aa16.24■□□□□ 0.19
USH1C-206ENST00000527551 NUTM1Q86Y26 1132 aa16.24■□□□□ 0.19
USH1C-206ENST00000527551 C2CD5Q86YS7 1000 aa16.24■□□□□ 0.19
USH1C-206ENST00000527551 ZBTB38Q8NAP3 1195 aaPredicted RBP16.24■□□□□ 0.19
USH1C-206ENST00000527551 BCL2L13Q9BXK5 485 aa16.24■□□□□ 0.19
USH1C-206ENST00000527551 PIM2Q9P1W9 311 aa16.24■□□□□ 0.19
USH1C-206ENST00000527551 ABCC12Q96J65 1359 aa16.24■□□□□ 0.19
USH1C-206ENST00000527551 NEURL1BA8MQ27 555 aa16.23■□□□□ 0.19
USH1C-206ENST00000527551 IPO8O15397 1037 aaKnown RBP16.23■□□□□ 0.19
USH1C-206ENST00000527551 PCCAP05165 728 aaPredicted RBP16.23■□□□□ 0.19
USH1C-206ENST00000527551 SRGNP10124 158 aa16.23■□□□□ 0.19
USH1C-206ENST00000527551 KCNA3P22001 575 aa16.23■□□□□ 0.19
USH1C-206ENST00000527551 CRY2Q49AN0 593 aa16.23■□□□□ 0.19
USH1C-206ENST00000527551 STYK1Q6J9G0 422 aa16.23■□□□□ 0.19
USH1C-206ENST00000527551 NLRP3Q96P20 1036 aa16.23■□□□□ 0.19
USH1C-206ENST00000527551 API5Q9BZZ5 524 aaKnown RBP16.23■□□□□ 0.19
USH1C-206ENST00000527551 MYH3P11055 1940 aa16.23■□□□□ 0.19
USH1C-206ENST00000527551 ALDH1L1O75891 902 aa16.22■□□□□ 0.19
USH1C-206ENST00000527551 NPR1P16066 1061 aa16.22■□□□□ 0.19
USH1C-206ENST00000527551 BEND3Q5T5X7 828 aa16.22■□□□□ 0.19
USH1C-206ENST00000527551 MASTLQ96GX5 879 aa16.22■□□□□ 0.19
USH1C-206ENST00000527551 CDHR2Q9BYE9 1310 aa16.21■□□□□ 0.19
USH1C-206ENST00000527551 F6X3S4 739 aa16.21■□□□□ 0.19
USH1C-206ENST00000527551 CHRNA5P30532 468 aa16.21■□□□□ 0.19
USH1C-206ENST00000527551 GCKRQ14397 625 aa16.21■□□□□ 0.19
USH1C-206ENST00000527551 CCDC24Q8N4L8 307 aa16.21■□□□□ 0.19
USH1C-206ENST00000527551 CNKSR1Q969H4 720 aa16.21■□□□□ 0.19
USH1C-206ENST00000527551 FAM89AQ96GI7 184 aa16.21■□□□□ 0.19
USH1C-206ENST00000527551 SRCIN1Q9C0H9 1055 aa16.21■□□□□ 0.19
USH1C-206ENST00000527551 NOB1Q9ULX3 412 aaKnown RBP16.21■□□□□ 0.19
USH1C-206ENST00000527551 CACNA1SQ13698 1873 aa16.2■□□□□ 0.18
USH1C-206ENST00000527551 GRIN3BO60391 1043 aa16.2■□□□□ 0.18
USH1C-206ENST00000527551 ALDH1B1P30837 517 aa16.2■□□□□ 0.18
USH1C-206ENST00000527551 HOXA10P31260 410 aaPredicted RBP16.2■□□□□ 0.18
USH1C-206ENST00000527551 CWF19L2Q2TBE0 894 aaKnown RBP16.2■□□□□ 0.18
USH1C-206ENST00000527551 DALRD3Q5D0E6 543 aaKnown RBP16.2■□□□□ 0.18
USH1C-206ENST00000527551 TTLL6Q8N841 843 aa16.2■□□□□ 0.18
USH1C-206ENST00000527551 H7C1W4 665 aa16.19■□□□□ 0.18
USH1C-206ENST00000527551 IRS4O14654 1257 aaPredicted RBP16.19■□□□□ 0.18
USH1C-206ENST00000527551 GPR162Q16538 588 aa16.19■□□□□ 0.18
USH1C-206ENST00000527551 SLC4A10Q6U841 1118 aa16.19■□□□□ 0.18
USH1C-206ENST00000527551 RPGRQ92834 1020 aaKnown RBP16.19■□□□□ 0.18
USH1C-206ENST00000527551 CCT4P50991 539 aaKnown RBP16.18■□□□□ 0.18
USH1C-206ENST00000527551 SF3B3Q15393 1217 aaKnown RBP16.18■□□□□ 0.18
USH1C-206ENST00000527551 ZNF622Q969S3 477 aaKnown RBP eCLIP16.18■□□□□ 0.18
USH1C-206ENST00000527551 YTHDC1Q96MU7 727 aaKnown RBP16.18■□□□□ 0.18
USH1C-206ENST00000527551 PDE8AO60658 829 aa16.17■□□□□ 0.18
USH1C-206ENST00000527551 BCAR3O75815 825 aa16.17■□□□□ 0.18
USH1C-206ENST00000527551 HCLS1P14317 486 aaPredicted RBP16.17■□□□□ 0.18
USH1C-206ENST00000527551 ZKSCAN2Q63HK3 967 aa16.17■□□□□ 0.18
USH1C-206ENST00000527551 ATF7IPQ6VMQ6 1270 aa16.17■□□□□ 0.18
USH1C-206ENST00000527551 RBM17Q96I25 401 aaKnown RBP16.17■□□□□ 0.18
USH1C-206ENST00000527551 CRAMP1Q96RY5 1269 aa16.17■□□□□ 0.18
USH1C-206ENST00000527551 BCS1LQ9Y276 419 aa16.17■□□□□ 0.18
USH1C-206ENST00000527551 CHD4Q14839 1912 aa16.16■□□□□ 0.18
USH1C-206ENST00000527551 GRM8O00222 908 aa16.16■□□□□ 0.18
USH1C-206ENST00000527551 SOGA3Q5TF21 947 aa16.16■□□□□ 0.18
USH1C-206ENST00000527551 UBE3BQ7Z3V4 1068 aa16.16■□□□□ 0.18
USH1C-206ENST00000527551 SYNE4Q8N205 404 aa16.16■□□□□ 0.18
USH1C-206ENST00000527551 PLA2G12BQ9BX93 195 aa16.16■□□□□ 0.18
USH1C-206ENST00000527551 C9orf78Q9NZ63 289 aaPredicted RBP16.16■□□□□ 0.18
USH1C-206ENST00000527551 RCAN3Q9UKA8 241 aa16.16■□□□□ 0.18
USH1C-206ENST00000527551 SLX4Q8IY92 1834 aa16.16■□□□□ 0.18
USH1C-206ENST00000527551 ABCC4O15439 1325 aa16.16■□□□□ 0.18
USH1C-206ENST00000527551 YBX3P16989 372 aaKnown RBP eCLIP16.15■□□□□ 0.18
USH1C-206ENST00000527551 PELP1Q8IZL8 1130 aaKnown RBP16.15■□□□□ 0.18
USH1C-206ENST00000527551 GOLGB1Q14789 3259 aaKnown RBP16.15■□□□□ 0.18
USH1C-206ENST00000527551 UTYO14607 1347 aa16.15■□□□□ 0.18
USH1C-206ENST00000527551 RTL9Q8NET4 1388 aa16.14■□□□□ 0.17
USH1C-206ENST00000527551 MS4A1P11836 297 aa16.14■□□□□ 0.17
USH1C-206ENST00000527551 CASP7P55210 303 aa16.14■□□□□ 0.17
USH1C-206ENST00000527551 CCDC152Q4G0S7 254 aa16.14■□□□□ 0.17
USH1C-206ENST00000527551 GRIPAP1Q4V328 841 aa16.14■□□□□ 0.17
USH1C-206ENST00000527551 RTL5Q5HYW3 569 aaPredicted RBP16.14■□□□□ 0.17
USH1C-206ENST00000527551 INTS3Q68E01 1043 aaKnown RBP16.14■□□□□ 0.17
USH1C-206ENST00000527551 PRPF40BQ6NWY9 871 aaKnown RBP16.14■□□□□ 0.17
USH1C-206ENST00000527551 DDX46Q7L014 1031 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms