RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 PPP1R42Q7Z4L9 355 aa20.88■□□□□ 0.93
CTSB-213ENST00000527215 DDX60Q8IY21 1712 aaKnown RBP20.87■□□□□ 0.93
CTSB-213ENST00000527215 ELL2O00472 640 aaPredicted RBP20.87■□□□□ 0.93
CTSB-213ENST00000527215 HSP90AB3PQ58FF7 597 aa20.87■□□□□ 0.93
CTSB-213ENST00000527215 WWC1Q8IX03 1113 aa20.87■□□□□ 0.93
CTSB-213ENST00000527215 C8orf58Q8NAV2 365 aa20.87■□□□□ 0.93
CTSB-213ENST00000527215 CRY2Q49AN0 593 aa20.86■□□□□ 0.93
CTSB-213ENST00000527215 RBM46Q8TBY0 533 aaKnown RBP20.86■□□□□ 0.93
CTSB-213ENST00000527215 TCIRG1Q13488 830 aa20.85■□□□□ 0.93
CTSB-213ENST00000527215 SOGA3Q5TF21 947 aa20.85■□□□□ 0.93
CTSB-213ENST00000527215 TSR2Q969E8 191 aaKnown RBP20.85■□□□□ 0.93
CTSB-213ENST00000527215 UTP14AQ9BVJ6 771 aaKnown RBP20.85■□□□□ 0.93
CTSB-213ENST00000527215 HYPKQ9NX55 129 aa20.85■□□□□ 0.93
CTSB-213ENST00000527215 TAF1P21675 1872 aa20.85■□□□□ 0.93
CTSB-213ENST00000527215 LTBP3Q9NS15 1303 aa20.84■□□□□ 0.93
CTSB-213ENST00000527215 ALDH1B1P30837 517 aa20.84■□□□□ 0.93
CTSB-213ENST00000527215 NLRP10Q86W26 655 aa20.84■□□□□ 0.93
CTSB-213ENST00000527215 PLBD2Q8NHP8 589 aa20.84■□□□□ 0.93
CTSB-213ENST00000527215 C7orf43Q8WVR3 580 aa20.84■□□□□ 0.93
CTSB-213ENST00000527215 TAOK3Q9H2K8 898 aa20.84■□□□□ 0.93
CTSB-213ENST00000527215 CACNA1FO60840 1977 aa20.83■□□□□ 0.93
CTSB-213ENST00000527215 NCBP3Q53F19 620 aaKnown RBP20.83■□□□□ 0.93
CTSB-213ENST00000527215 CCDC93Q567U6 631 aa20.83■□□□□ 0.93
CTSB-213ENST00000527215 ANKRD13DQ6ZTN6 518 aa20.83■□□□□ 0.93
CTSB-213ENST00000527215 RPGRQ92834 1020 aaKnown RBP20.83■□□□□ 0.93
CTSB-213ENST00000527215 OLFM4Q6UX06 510 aa20.82■□□□□ 0.92
CTSB-213ENST00000527215 C3orf67Q6ZVT6 689 aa20.82■□□□□ 0.92
CTSB-213ENST00000527215 FAM9BQ8IZU0 186 aa20.82■□□□□ 0.92
CTSB-213ENST00000527215 TSPYL6Q8N831 410 aa20.82■□□□□ 0.92
CTSB-213ENST00000527215 SALL2Q9Y467 1007 aaPredicted RBP20.82■□□□□ 0.92
CTSB-213ENST00000527215 RNF123Q5XPI4 1314 aa20.81■□□□□ 0.92
CTSB-213ENST00000527215 FSTL1Q12841 308 aa20.81■□□□□ 0.92
CTSB-213ENST00000527215 SLC10A5Q5PT55 438 aa20.81■□□□□ 0.92
CTSB-213ENST00000527215 PHAXQ9H814 394 aaKnown RBP20.81■□□□□ 0.92
CTSB-213ENST00000527215 IL16Q14005 1332 aa20.8■□□□□ 0.92
CTSB-213ENST00000527215 HOXA10P31260 410 aaPredicted RBP20.8■□□□□ 0.92
CTSB-213ENST00000527215 ZNF428Q96B54 188 aa20.8■□□□□ 0.92
CTSB-213ENST00000527215 NLRP3Q96P20 1036 aa20.8■□□□□ 0.92
CTSB-213ENST00000527215 WDR90Q96KV7 1748 aa20.79■□□□□ 0.92
CTSB-213ENST00000527215 SYNE4Q8N205 404 aa20.79■□□□□ 0.92
CTSB-213ENST00000527215 RBM17Q96I25 401 aaKnown RBP20.79■□□□□ 0.92
CTSB-213ENST00000527215 ISCA1Q9BUE6 129 aa20.79■□□□□ 0.92
CTSB-213ENST00000527215 TRMT112Q9UI30 125 aaKnown RBP20.79■□□□□ 0.92
CTSB-213ENST00000527215 ATP5J2-PTCD1G3V325 749 aa20.78■□□□□ 0.92
CTSB-213ENST00000527215 GOLGA2Q08379 1002 aa20.78■□□□□ 0.92
CTSB-213ENST00000527215 CCDC30Q5VVM6 783 aa20.78■□□□□ 0.92
CTSB-213ENST00000527215 RRAGCQ9HB90 399 aa20.78■□□□□ 0.92
CTSB-213ENST00000527215 SNED1Q8TER0 1413 aa20.78■□□□□ 0.92
CTSB-213ENST00000527215 SH3TC1Q8TE82 1336 aa20.78■□□□□ 0.92
CTSB-213ENST00000527215 GLTPD2A6NH11 291 aa20.77■□□□□ 0.92
CTSB-213ENST00000527215 HCLS1P14317 486 aaPredicted RBP20.77■□□□□ 0.92
CTSB-213ENST00000527215 FKBP4Q02790 459 aaKnown RBP eCLIP20.77■□□□□ 0.92
CTSB-213ENST00000527215 RIC3Q7Z5B4 369 aa20.77■□□□□ 0.92
CTSB-213ENST00000527215 RTKN2Q8IZC4 609 aa20.77■□□□□ 0.92
CTSB-213ENST00000527215 CRAMP1Q96RY5 1269 aa20.77■□□□□ 0.92
CTSB-213ENST00000527215 CHMP4AQ9BY43 222 aa20.77■□□□□ 0.92
CTSB-213ENST00000527215 TWISTNBQ3B726 338 aaPredicted RBP20.76■□□□□ 0.91
CTSB-213ENST00000527215 SMC1BQ8NDV3 1235 aa20.76■□□□□ 0.91
CTSB-213ENST00000527215 FANCIQ9NVI1 1328 aa20.76■□□□□ 0.91
CTSB-213ENST00000527215 WDR63Q8IWG1 891 aa20.75■□□□□ 0.91
CTSB-213ENST00000527215 TCERG1O14776 1098 aaKnown RBP20.74■□□□□ 0.91
CTSB-213ENST00000527215 PPEF1O14829 653 aaPredicted RBP20.74■□□□□ 0.91
CTSB-213ENST00000527215 SLC51AQ86UW1 340 aa20.74■□□□□ 0.91
CTSB-213ENST00000527215 ZNF277Q9NRM2 450 aaPredicted RBP20.74■□□□□ 0.91
CTSB-213ENST00000527215 ABCC4O15439 1325 aa20.74■□□□□ 0.91
CTSB-213ENST00000527215 MYH3P11055 1940 aa20.73■□□□□ 0.91
CTSB-213ENST00000527215 VEGFAP15692 232 aaPredicted RBP20.73■□□□□ 0.91
CTSB-213ENST00000527215 IFFO2Q5TF58 517 aa20.73■□□□□ 0.91
CTSB-213ENST00000527215 CC2D2BQ6DHV5 1058 aa20.73■□□□□ 0.91
CTSB-213ENST00000527215 DPY19L2Q6NUT2 758 aa20.73■□□□□ 0.91
CTSB-213ENST00000527215 FAM89AQ96GI7 184 aa20.73■□□□□ 0.91
CTSB-213ENST00000527215 MYD88Q99836 296 aa20.73■□□□□ 0.91
CTSB-213ENST00000527215 STK31Q9BXU1 1019 aa20.73■□□□□ 0.91
CTSB-213ENST00000527215 LRRC37AA6NMS7 1700 aa20.73■□□□□ 0.91
CTSB-213ENST00000527215 SCN4AP35499 1836 aa20.72■□□□□ 0.91
CTSB-213ENST00000527215 TRIM28Q13263 835 aaKnown RBP20.72■□□□□ 0.91
CTSB-213ENST00000527215 DDX58O95786 925 aaKnown RBP20.71■□□□□ 0.91
CTSB-213ENST00000527215 RTL5Q5HYW3 569 aaPredicted RBP20.71■□□□□ 0.91
CTSB-213ENST00000527215 PSMD1Q99460 953 aa20.71■□□□□ 0.91
CTSB-213ENST00000527215 IARSP41252 1262 aaKnown RBP20.7■□□□□ 0.9
CTSB-213ENST00000527215 SPINK5Q9NQ38 1064 aaPredicted RBP20.7■□□□□ 0.9
CTSB-213ENST00000527215 COL4A1P02462 1669 aa20.7■□□□□ 0.9
CTSB-213ENST00000527215 COL4A5P29400 1685 aa20.7■□□□□ 0.9
CTSB-213ENST00000527215 EXOSC9Q06265 439 aaKnown RBP20.69■□□□□ 0.9
CTSB-213ENST00000527215 GRIPAP1Q4V328 841 aa20.69■□□□□ 0.9
CTSB-213ENST00000527215 DDX46Q7L014 1031 aaKnown RBP20.69■□□□□ 0.9
CTSB-213ENST00000527215 DNAJC5GQ8N7S2 189 aa20.69■□□□□ 0.9
CTSB-213ENST00000527215 METTL22Q9BUU2 404 aaPredicted RBP20.69■□□□□ 0.9
CTSB-213ENST00000527215 MAP3K2Q9Y2U5 619 aa20.69■□□□□ 0.9
CTSB-213ENST00000527215 ATP6V0A2Q9Y487 856 aa20.69■□□□□ 0.9
CTSB-213ENST00000527215 POTECB2RU33 542 aa20.68■□□□□ 0.9
CTSB-213ENST00000527215 DDNO94850 711 aaPredicted RBP20.68■□□□□ 0.9
CTSB-213ENST00000527215 SLC4A2P04920 1241 aa20.68■□□□□ 0.9
CTSB-213ENST00000527215 G2E3Q7L622 706 aa20.68■□□□□ 0.9
CTSB-213ENST00000527215 SPEF2Q9C093 1822 aa20.67■□□□□ 0.9
CTSB-213ENST00000527215 PI4KAP2A4QPH2 592 aa20.67■□□□□ 0.9
CTSB-213ENST00000527215 IRS4O14654 1257 aaPredicted RBP20.67■□□□□ 0.9
CTSB-213ENST00000527215 BBOX1O75936 387 aa20.67■□□□□ 0.9
CTSB-213ENST00000527215 GRAPQ13588 217 aa20.67■□□□□ 0.9
CTSB-213ENST00000527215 KSR2Q6VAB6 950 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms