RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 NWD2Q9ULI1 1742 aa11.08□□□□□ -0.64
SCN3B-203ENST00000527125 IL1RAPL2Q9NP60 686 aa11.07□□□□□ -0.64
SCN3B-203ENST00000527125 SMC3Q9UQE7 1217 aa11.07□□□□□ -0.64
SCN3B-203ENST00000527125 COL15A1P39059 1388 aa11.07□□□□□ -0.64
SCN3B-203ENST00000527125 ADD1P35611 737 aaKnown RBP11.07□□□□□ -0.64
SCN3B-203ENST00000527125 TOB2Q14106 344 aaPredicted RBP11.07□□□□□ -0.64
SCN3B-203ENST00000527125 USPL1Q5W0Q7 1092 aa11.07□□□□□ -0.64
SCN3B-203ENST00000527125 CNTROBQ8N137 903 aa11.07□□□□□ -0.64
SCN3B-203ENST00000527125 PGBD1Q96JS3 809 aa11.07□□□□□ -0.64
SCN3B-203ENST00000527125 SCN11AQ9UI33 1791 aa11.07□□□□□ -0.64
SCN3B-203ENST00000527125 GABPB1Q06547 395 aaPredicted RBP11.06□□□□□ -0.64
SCN3B-203ENST00000527125 CDC37L1Q7L3B6 337 aa11.06□□□□□ -0.64
SCN3B-203ENST00000527125 C4AP0C0L4 1744 aa11.06□□□□□ -0.64
SCN3B-203ENST00000527125 C4BP0C0L5 1744 aa11.06□□□□□ -0.64
SCN3B-203ENST00000527125 ANKARQ7Z5J8 1434 aa11.06□□□□□ -0.64
SCN3B-203ENST00000527125 FIBPO43427 364 aa11.06□□□□□ -0.64
SCN3B-203ENST00000527125 NBPF7P0C2Y1 421 aaPredicted RBP11.06□□□□□ -0.64
SCN3B-203ENST00000527125 CASTP20810 708 aaKnown RBP11.06□□□□□ -0.64
SCN3B-203ENST00000527125 CCDC144BQ3MJ40 725 aa11.06□□□□□ -0.64
SCN3B-203ENST00000527125 CCDC144CPQ8IYA2 1237 aa11.06□□□□□ -0.64
SCN3B-203ENST00000527125 PHAXQ9H814 394 aaKnown RBP11.06□□□□□ -0.64
SCN3B-203ENST00000527125 NRBP1Q9UHY1 535 aa11.06□□□□□ -0.64
SCN3B-203ENST00000527125 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.06□□□□□ -0.64
SCN3B-203ENST00000527125 GNAT3A8MTJ3 354 aa11.06□□□□□ -0.64
SCN3B-203ENST00000527125 CCDC83Q8IWF9 413 aa11.06□□□□□ -0.64
SCN3B-203ENST00000527125 UBTFL1P0CB47 393 aaPredicted RBP11.05□□□□□ -0.64
SCN3B-203ENST00000527125 FOXD4L6Q3SYB3 417 aaPredicted RBP11.05□□□□□ -0.64
SCN3B-203ENST00000527125 FOXD4L3Q6VB84 417 aaPredicted RBP11.05□□□□□ -0.64
SCN3B-203ENST00000527125 KIF18AQ8NI77 898 aa11.05□□□□□ -0.64
SCN3B-203ENST00000527125 CACTINQ8WUQ7 758 aaKnown RBP11.05□□□□□ -0.64
SCN3B-203ENST00000527125 STK31Q9BXU1 1019 aa11.05□□□□□ -0.64
SCN3B-203ENST00000527125 SENP3Q9H4L4 574 aaPredicted RBP11.05□□□□□ -0.64
SCN3B-203ENST00000527125 PDRG1Q9NUG6 133 aa11.05□□□□□ -0.64
SCN3B-203ENST00000527125 GLRX3O76003 335 aaKnown RBP11.05□□□□□ -0.64
SCN3B-203ENST00000527125 LRMPQ12912 555 aa11.05□□□□□ -0.64
SCN3B-203ENST00000527125 MAP3K11Q16584 847 aa11.05□□□□□ -0.64
SCN3B-203ENST00000527125 SLFNL1Q499Z3 407 aa11.05□□□□□ -0.64
SCN3B-203ENST00000527125 LUZP1Q86V48 1076 aa11.05□□□□□ -0.64
SCN3B-203ENST00000527125 PAXBP1Q9Y5B6 917 aa11.05□□□□□ -0.64
SCN3B-203ENST00000527125 NEDD4P46934 1319 aa11.05□□□□□ -0.64
SCN3B-203ENST00000527125 RESTQ13127 1097 aa11.04□□□□□ -0.64
SCN3B-203ENST00000527125 SPG7Q9UQ90 795 aa11.04□□□□□ -0.64
SCN3B-203ENST00000527125 ARFGEF2Q9Y6D5 1785 aa11.04□□□□□ -0.64
SCN3B-203ENST00000527125 TMEM94Q12767 1356 aa11.04□□□□□ -0.64
SCN3B-203ENST00000527125 AFDNP55196 1824 aaKnown RBP11.04□□□□□ -0.64
SCN3B-203ENST00000527125 SPEF2Q9C093 1822 aa11.04□□□□□ -0.64
SCN3B-203ENST00000527125 TAF7Q15545 349 aaPredicted RBP11.04□□□□□ -0.64
SCN3B-203ENST00000527125 LEO1Q8WVC0 666 aaPredicted RBP11.04□□□□□ -0.64
SCN3B-203ENST00000527125 MRFAP1L1Q96HT8 127 aa11.04□□□□□ -0.64
SCN3B-203ENST00000527125 KAZALD1Q96I82 304 aa11.04□□□□□ -0.64
SCN3B-203ENST00000527125 LARP6Q9BRS8 491 aaKnown RBP11.04□□□□□ -0.64
SCN3B-203ENST00000527125 NPHP3Q7Z494 1330 aa11.04□□□□□ -0.64
SCN3B-203ENST00000527125 MAP4K4O95819 1239 aaPredicted RBP11.04□□□□□ -0.64
SCN3B-203ENST00000527125 EIF4A1P60842 406 aaKnown RBP11.04□□□□□ -0.64
SCN3B-203ENST00000527125 CCZ1BP86790 482 aa11.04□□□□□ -0.64
SCN3B-203ENST00000527125 CCZ1P86791 482 aaPredicted RBP11.04□□□□□ -0.64
SCN3B-203ENST00000527125 CREB3L3Q68CJ9 461 aa11.04□□□□□ -0.64
SCN3B-203ENST00000527125 CCDC186Q7Z3E2 898 aa11.04□□□□□ -0.64
SCN3B-203ENST00000527125 DDX19AQ9NUU7 478 aaKnown RBP11.04□□□□□ -0.64
SCN3B-203ENST00000527125 RFX7Q2KHR2 1363 aa11.04□□□□□ -0.64
SCN3B-203ENST00000527125 GOLGA6L6A8MZA4 724 aa11.03□□□□□ -0.64
SCN3B-203ENST00000527125 SLC27A2O14975 620 aa11.03□□□□□ -0.64
SCN3B-203ENST00000527125 DNTTIP2Q5QJE6 756 aaKnown RBP11.03□□□□□ -0.64
SCN3B-203ENST00000527125 NUP62CLQ9H1M0 184 aa11.03□□□□□ -0.64
SCN3B-203ENST00000527125 TAF6LQ9Y6J9 622 aa11.03□□□□□ -0.64
SCN3B-203ENST00000527125 TJP1Q07157 1748 aa11.03□□□□□ -0.64
SCN3B-203ENST00000527125 CAVIN2O95810 425 aa11.03□□□□□ -0.64
SCN3B-203ENST00000527125 FAM193AP78312 1265 aa11.03□□□□□ -0.64
SCN3B-203ENST00000527125 ANO6Q4KMQ2 910 aa11.03□□□□□ -0.64
SCN3B-203ENST00000527125 CWC27Q6UX04 472 aaKnown RBP11.03□□□□□ -0.64
SCN3B-203ENST00000527125 NUP188Q5SRE5 1749 aa11.03□□□□□ -0.64
SCN3B-203ENST00000527125 CCDC93Q567U6 631 aa11.03□□□□□ -0.64
SCN3B-203ENST00000527125 LRRC8AQ8IWT6 810 aa11.03□□□□□ -0.64
SCN3B-203ENST00000527125 CYP46A1Q9Y6A2 500 aa11.03□□□□□ -0.64
SCN3B-203ENST00000527125 SPDYE4A6NLX3 237 aa11.02□□□□□ -0.65
SCN3B-203ENST00000527125 SURF6O75683 361 aaKnown RBP11.02□□□□□ -0.65
SCN3B-203ENST00000527125 HOXC9P31274 260 aa11.02□□□□□ -0.65
SCN3B-203ENST00000527125 KRT85P78386 507 aa11.02□□□□□ -0.65
SCN3B-203ENST00000527125 SNW1Q13573 536 aaKnown RBP11.02□□□□□ -0.65
SCN3B-203ENST00000527125 ENGASEQ8NFI3 743 aa11.02□□□□□ -0.65
SCN3B-203ENST00000527125 SMARCC2Q8TAQ2 1214 aa11.02□□□□□ -0.65
SCN3B-203ENST00000527125 JAKMIP1Q96N16 626 aaKnown RBP11.02□□□□□ -0.65
SCN3B-203ENST00000527125 CGNQ9P2M7 1197 aaKnown RBP11.02□□□□□ -0.65
SCN3B-203ENST00000527125 SLIT3O75094 1523 aa11.02□□□□□ -0.65
SCN3B-203ENST00000527125 PARP4Q9UKK3 1724 aaKnown RBP11.02□□□□□ -0.65
SCN3B-203ENST00000527125 LAMB4A4D0S4 1761 aa11.02□□□□□ -0.65
SCN3B-203ENST00000527125 RPS6KB1P23443 525 aa11.02□□□□□ -0.65
SCN3B-203ENST00000527125 EVI5LQ96CN4 794 aa11.02□□□□□ -0.65
SCN3B-203ENST00000527125 L2HGDHQ9H9P8 463 aa11.02□□□□□ -0.65
SCN3B-203ENST00000527125 SALL1Q9NSC2 1324 aa11.01□□□□□ -0.65
SCN3B-203ENST00000527125 NR1I2O75469 434 aa11.01□□□□□ -0.65
SCN3B-203ENST00000527125 NAA30Q147X3 362 aaPredicted RBP11.01□□□□□ -0.65
SCN3B-203ENST00000527125 HSP90AB4PQ58FF6 505 aa11.01□□□□□ -0.65
SCN3B-203ENST00000527125 PRPF40BQ6NWY9 871 aaKnown RBP11.01□□□□□ -0.65
SCN3B-203ENST00000527125 DHX40Q8IX18 779 aaKnown RBP11.01□□□□□ -0.65
SCN3B-203ENST00000527125 SCAND2PQ9GZW5 306 aaPredicted RBP11.01□□□□□ -0.65
SCN3B-203ENST00000527125 ECHDC1Q9NTX5 307 aa11.01□□□□□ -0.65
SCN3B-203ENST00000527125 DACT1Q9NYF0 836 aa11.01□□□□□ -0.65
SCN3B-203ENST00000527125 RBM8AQ9Y5S9 174 aaKnown RBP11.01□□□□□ -0.65
SCN3B-203ENST00000527125 SRGAP3O43295 1099 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms