RNA–Protein interactions for RNA: ENST00000526149.1

CKLF-206, Transcript of chemokine like factor, humanhuman

TSL 2

Gene CKLF, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-206ENST00000526149 TNRC6CQ9HCJ0 1690 aaKnown RBP28.82■■■□□ 2.2
CKLF-206ENST00000526149 RIC1Q4ADV7 1423 aa28.81■■■□□ 2.2
CKLF-206ENST00000526149 ATP5J2-PTCD1G3V325 749 aa28.81■■■□□ 2.2
CKLF-206ENST00000526149 SLC4A2P04920 1241 aa28.81■■■□□ 2.2
CKLF-206ENST00000526149 RIC3Q7Z5B4 369 aa28.81■■■□□ 2.2
CKLF-206ENST00000526149 CRY2Q49AN0 593 aa28.8■■■□□ 2.2
CKLF-206ENST00000526149 C3orf67Q6ZVT6 689 aa28.8■■■□□ 2.2
CKLF-206ENST00000526149 SYNE4Q8N205 404 aa28.8■■■□□ 2.2
CKLF-206ENST00000526149 ZNF428Q96B54 188 aa28.8■■■□□ 2.2
CKLF-206ENST00000526149 NPR1P16066 1061 aa28.79■■■□□ 2.2
CKLF-206ENST00000526149 SLFN5Q08AF3 891 aa28.79■■■□□ 2.2
CKLF-206ENST00000526149 SLC10A5Q5PT55 438 aa28.79■■■□□ 2.2
CKLF-206ENST00000526149 CDCA7LQ96GN5 454 aa28.79■■■□□ 2.2
CKLF-206ENST00000526149 ARFGEF2Q9Y6D5 1785 aa28.79■■■□□ 2.2
CKLF-206ENST00000526149 TRIM28Q13263 835 aaKnown RBP28.78■■■□□ 2.2
CKLF-206ENST00000526149 CNKSR1Q969H4 720 aa28.78■■■□□ 2.2
CKLF-206ENST00000526149 E9PSI1 815 aa28.77■■■□□ 2.2
CKLF-206ENST00000526149 RNF123Q5XPI4 1314 aa28.76■■■□□ 2.19
CKLF-206ENST00000526149 PRPF40BQ6NWY9 871 aaKnown RBP28.76■■■□□ 2.19
CKLF-206ENST00000526149 MYD88Q99836 296 aa28.76■■■□□ 2.19
CKLF-206ENST00000526149 TRMT112Q9UI30 125 aaKnown RBP28.76■■■□□ 2.19
CKLF-206ENST00000526149 ADCY9O60503 1353 aa28.75■■■□□ 2.19
CKLF-206ENST00000526149 C21orf2O43822 256 aa28.75■■■□□ 2.19
CKLF-206ENST00000526149 DDX58O95786 925 aaKnown RBP28.75■■■□□ 2.19
CKLF-206ENST00000526149 KSR2Q6VAB6 950 aa28.75■■■□□ 2.19
CKLF-206ENST00000526149 ZNF784Q8NCA9 323 aaPredicted RBP28.75■■■□□ 2.19
CKLF-206ENST00000526149 METTL22Q9BUU2 404 aaPredicted RBP28.75■■■□□ 2.19
CKLF-206ENST00000526149 ZNF219Q9P2Y4 722 aaPredicted RBP28.75■■■□□ 2.19
CKLF-206ENST00000526149 MAP3K2Q9Y2U5 619 aa28.75■■■□□ 2.19
CKLF-206ENST00000526149 SLX4Q8IY92 1834 aa28.75■■■□□ 2.19
CKLF-206ENST00000526149 PI4KAP2A4QPH2 592 aa28.74■■■□□ 2.19
CKLF-206ENST00000526149 TRMT2AQ8IZ69 625 aaKnown RBP28.74■■■□□ 2.19
CKLF-206ENST00000526149 PI4KAP1Q8N8J0 262 aa28.74■■■□□ 2.19
CKLF-206ENST00000526149 C7orf43Q8WVR3 580 aa28.74■■■□□ 2.19
CKLF-206ENST00000526149 SH3TC1Q8TE82 1336 aa28.73■■■□□ 2.19
CKLF-206ENST00000526149 HCLS1P14317 486 aaPredicted RBP28.73■■■□□ 2.19
CKLF-206ENST00000526149 FLIIQ13045 1269 aa28.73■■■□□ 2.19
CKLF-206ENST00000526149 HOXA10P31260 410 aaPredicted RBP28.72■■■□□ 2.19
CKLF-206ENST00000526149 RASSF7Q02833 373 aa28.72■■■□□ 2.19
CKLF-206ENST00000526149 FAM89AQ96GI7 184 aa28.72■■■□□ 2.19
CKLF-206ENST00000526149 NFKBIEO00221 500 aa28.71■■■□□ 2.19
CKLF-206ENST00000526149 PRELPP51888 382 aa28.71■■■□□ 2.19
CKLF-206ENST00000526149 NLRP3Q96P20 1036 aa28.71■■■□□ 2.19
CKLF-206ENST00000526149 IGKV5-2P06315 115 aa28.69■■■□□ 2.18
CKLF-206ENST00000526149 ALDH1B1P30837 517 aa28.68■■■□□ 2.18
CKLF-206ENST00000526149 C9orf131Q5VYM1 1079 aa28.68■■■□□ 2.18
CKLF-206ENST00000526149 CCDC191Q8NCU4 936 aa28.68■■■□□ 2.18
CKLF-206ENST00000526149 RPGRQ92834 1020 aaKnown RBP28.68■■■□□ 2.18
CKLF-206ENST00000526149 RTL5Q5HYW3 569 aaPredicted RBP28.67■■■□□ 2.18
CKLF-206ENST00000526149 OLFM4Q6UX06 510 aa28.67■■■□□ 2.18
CKLF-206ENST00000526149 CACNA1SQ13698 1873 aa28.67■■■□□ 2.18
CKLF-206ENST00000526149 FKBP5Q13451 457 aaPredicted RBP28.66■■■□□ 2.18
CKLF-206ENST00000526149 ZBTB38Q8NAP3 1195 aaPredicted RBP28.66■■■□□ 2.18
CKLF-206ENST00000526149 CRAMP1Q96RY5 1269 aa28.66■■■□□ 2.18
CKLF-206ENST00000526149 RBM17Q96I25 401 aaKnown RBP28.65■■■□□ 2.18
CKLF-206ENST00000526149 CWC25Q9NXE8 425 aaPredicted RBP28.65■■■□□ 2.18
CKLF-206ENST00000526149 SLC51AQ86UW1 340 aa28.64■■■□□ 2.18
CKLF-206ENST00000526149 JARID2Q92833 1246 aaPredicted RBP28.64■■■□□ 2.18
CKLF-206ENST00000526149 CACNA1FO60840 1977 aa28.64■■■□□ 2.17
CKLF-206ENST00000526149 DDX60Q8IY21 1712 aaKnown RBP28.63■■■□□ 2.17
CKLF-206ENST00000526149 LAMB2P55268 1798 aa28.63■■■□□ 2.17
CKLF-206ENST00000526149 IRS4O14654 1257 aaPredicted RBP28.63■■■□□ 2.17
CKLF-206ENST00000526149 PCCAP05165 728 aaPredicted RBP28.63■■■□□ 2.17
CKLF-206ENST00000526149 CWF19L2Q2TBE0 894 aaKnown RBP28.63■■■□□ 2.17
CKLF-206ENST00000526149 DNAAF4Q8WXU2 420 aa28.63■■■□□ 2.17
CKLF-206ENST00000526149 RNF181Q9P0P0 153 aa28.63■■■□□ 2.17
CKLF-206ENST00000526149 SBF1O95248 1867 aa28.63■■■□□ 2.17
CKLF-206ENST00000526149 SOGA3Q5TF21 947 aa28.62■■■□□ 2.17
CKLF-206ENST00000526149 FER1L6Q2WGJ9 1857 aa28.61■■■□□ 2.17
CKLF-206ENST00000526149 NEURL1BA8MQ27 555 aa28.61■■■□□ 2.17
CKLF-206ENST00000526149 NEXNQ0ZGT2 675 aa28.61■■■□□ 2.17
CKLF-206ENST00000526149 SF3B3Q15393 1217 aaKnown RBP28.61■■■□□ 2.17
CKLF-206ENST00000526149 CCDC93Q567U6 631 aa28.61■■■□□ 2.17
CKLF-206ENST00000526149 MRPL50Q8N5N7 158 aaKnown RBP28.61■■■□□ 2.17
CKLF-206ENST00000526149 ABCC4O15439 1325 aa28.61■■■□□ 2.17
CKLF-206ENST00000526149 LTBP3Q9NS15 1303 aa28.61■■■□□ 2.17
CKLF-206ENST00000526149 SNED1Q8TER0 1413 aa28.6■■■□□ 2.17
CKLF-206ENST00000526149 F6X3S4 739 aa28.6■■■□□ 2.17
CKLF-206ENST00000526149 LMNB1P20700 586 aa28.6■■■□□ 2.17
CKLF-206ENST00000526149 HNRNPUQ00839 825 aaKnown RBP eCLIP28.59■■■□□ 2.17
CKLF-206ENST00000526149 SSH1Q8WYL5 1049 aa28.59■■■□□ 2.17
CKLF-206ENST00000526149 TAOK3Q9H2K8 898 aa28.58■■■□□ 2.17
CKLF-206ENST00000526149 PPEF1O14829 653 aaPredicted RBP28.57■■■□□ 2.16
CKLF-206ENST00000526149 LINS1Q8NG48 757 aa28.57■■■□□ 2.16
CKLF-206ENST00000526149 GCKRQ14397 625 aa28.56■■■□□ 2.16
CKLF-206ENST00000526149 BEND3Q5T5X7 828 aa28.56■■■□□ 2.16
CKLF-206ENST00000526149 DDX46Q7L014 1031 aaKnown RBP28.56■■■□□ 2.16
CKLF-206ENST00000526149 ZNF526Q8TF50 670 aaPredicted RBP28.56■■■□□ 2.16
CKLF-206ENST00000526149 CDHR2Q9BYE9 1310 aa28.55■■■□□ 2.16
CKLF-206ENST00000526149 H7C1W4 665 aa28.55■■■□□ 2.16
CKLF-206ENST00000526149 FKBP4Q02790 459 aaKnown RBP eCLIP28.55■■■□□ 2.16
CKLF-206ENST00000526149 RTKN2Q8IZC4 609 aa28.55■■■□□ 2.16
CKLF-206ENST00000526149 PDE8AO60658 829 aa28.54■■■□□ 2.16
CKLF-206ENST00000526149 GRAPQ13588 217 aa28.54■■■□□ 2.16
CKLF-206ENST00000526149 GRAPLQ8TC17 118 aaPredicted RBP28.54■■■□□ 2.16
CKLF-206ENST00000526149 BCL2L13Q9BXK5 485 aa28.54■■■□□ 2.16
CKLF-206ENST00000526149 COL4A1P02462 1669 aa28.54■■■□□ 2.16
CKLF-206ENST00000526149 BBOX1O75936 387 aa28.53■■■□□ 2.16
CKLF-206ENST00000526149 CASP7P55210 303 aa28.53■■■□□ 2.16
CKLF-206ENST00000526149 ALDH1L2Q3SY69 923 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms