RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 FAM196BA6NMK8 535 aa9.39□□□□□ -0.91
CSDE1-210ENST00000525878 NID1P14543 1247 aa9.39□□□□□ -0.91
CSDE1-210ENST00000525878 CALR3Q96L12 384 aaKnown RBP9.39□□□□□ -0.91
CSDE1-210ENST00000525878 EFCC1Q9HA90 598 aa9.39□□□□□ -0.91
CSDE1-210ENST00000525878 IGFBP4P22692 258 aa9.38□□□□□ -0.91
CSDE1-210ENST00000525878 DPYDQ12882 1025 aa9.38□□□□□ -0.91
CSDE1-210ENST00000525878 RTN1Q16799 776 aa9.38□□□□□ -0.91
CSDE1-210ENST00000525878 C8orf86Q6ZUL3 223 aa9.38□□□□□ -0.91
CSDE1-210ENST00000525878 DMGDHQ9UI17 866 aaKnown RBP9.38□□□□□ -0.91
CSDE1-210ENST00000525878 BCS1LQ9Y276 419 aa9.38□□□□□ -0.91
CSDE1-210ENST00000525878 USP17L15C9J2P7 530 aa9.37□□□□□ -0.91
CSDE1-210ENST00000525878 USP17L10C9JJH3 530 aa9.37□□□□□ -0.91
CSDE1-210ENST00000525878 USP17L13C9JLJ4 530 aa9.37□□□□□ -0.91
CSDE1-210ENST00000525878 USP17L12C9JPN9 530 aa9.37□□□□□ -0.91
CSDE1-210ENST00000525878 USP17L11C9JVI0 530 aa9.37□□□□□ -0.91
CSDE1-210ENST00000525878 USP17L21D6R901 530 aa9.37□□□□□ -0.91
CSDE1-210ENST00000525878 USP17L18D6R9N7 530 aa9.37□□□□□ -0.91
CSDE1-210ENST00000525878 USP17L22D6RA61 530 aa9.37□□□□□ -0.91
CSDE1-210ENST00000525878 USP17L17D6RBQ6 530 aa9.37□□□□□ -0.91
CSDE1-210ENST00000525878 USP17L19D6RCP7 530 aa9.37□□□□□ -0.91
CSDE1-210ENST00000525878 USP17L20D6RJB6 530 aa9.37□□□□□ -0.91
CSDE1-210ENST00000525878 ITGB7P26010 798 aa9.37□□□□□ -0.91
CSDE1-210ENST00000525878 USP17L24Q0WX57 530 aa9.37□□□□□ -0.91
CSDE1-210ENST00000525878 XP32Q5T750 250 aa9.37□□□□□ -0.91
CSDE1-210ENST00000525878 ANKMY2Q8IV38 441 aa9.37□□□□□ -0.91
CSDE1-210ENST00000525878 CHMP7Q8WUX9 453 aaPredicted RBP9.37□□□□□ -0.91
CSDE1-210ENST00000525878 TGFBR3LH3BV60 316 aa9.36□□□□□ -0.91
CSDE1-210ENST00000525878 GATA4P43694 442 aa9.36□□□□□ -0.91
CSDE1-210ENST00000525878 PRRT3Q5FWE3 981 aa9.36□□□□□ -0.91
CSDE1-210ENST00000525878 BHMTQ93088 406 aa9.36□□□□□ -0.91
CSDE1-210ENST00000525878 NGLY1Q96IV0 654 aa9.36□□□□□ -0.91
CSDE1-210ENST00000525878 ARXQ96QS3 562 aa9.36□□□□□ -0.91
CSDE1-210ENST00000525878 HINFPQ9BQA5 517 aa9.36□□□□□ -0.91
CSDE1-210ENST00000525878 GSX2Q9BZM3 304 aa9.36□□□□□ -0.91
CSDE1-210ENST00000525878 VRTNQ9H8Y1 702 aa9.35□□□□□ -0.91
CSDE1-210ENST00000525878 GRNP28799 593 aaKnown RBP9.34□□□□□ -0.91
CSDE1-210ENST00000525878 DOC2BQ14184 412 aa9.34□□□□□ -0.91
CSDE1-210ENST00000525878 FAM229AH3BQW9 127 aa9.33□□□□□ -0.92
CSDE1-210ENST00000525878 LMOD1P29536 600 aaPredicted RBP9.33□□□□□ -0.92
CSDE1-210ENST00000525878 ILDR2Q71H61 639 aa9.33□□□□□ -0.92
CSDE1-210ENST00000525878 LGR5O75473 907 aa9.32□□□□□ -0.92
CSDE1-210ENST00000525878 WEE1P30291 646 aa9.32□□□□□ -0.92
CSDE1-210ENST00000525878 SLC6A14Q9UN76 642 aa9.32□□□□□ -0.92
CSDE1-210ENST00000525878 LILRB5O75023 590 aa9.31□□□□□ -0.92
CSDE1-210ENST00000525878 INPP5BP32019 993 aa9.31□□□□□ -0.92
CSDE1-210ENST00000525878 TRIM28Q13263 835 aaKnown RBP9.31□□□□□ -0.92
CSDE1-210ENST00000525878 CCINQ13939 588 aa9.31□□□□□ -0.92
CSDE1-210ENST00000525878 CFAP70Q5T0N1 1121 aa9.31□□□□□ -0.92
CSDE1-210ENST00000525878 UBE2OQ9C0C9 1292 aaKnown RBP9.31□□□□□ -0.92
CSDE1-210ENST00000525878 APBA3O96018 575 aa9.3□□□□□ -0.92
CSDE1-210ENST00000525878 RSPO4Q2I0M5 234 aaPredicted RBP9.3□□□□□ -0.92
CSDE1-210ENST00000525878 NKAPLQ5M9Q1 402 aa9.3□□□□□ -0.92
CSDE1-210ENST00000525878 QTRT2Q9H974 415 aaKnown RBP9.3□□□□□ -0.92
CSDE1-210ENST00000525878 C11orf16Q9NQ32 467 aa9.3□□□□□ -0.92
CSDE1-210ENST00000525878 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.3□□□□□ -0.92
CSDE1-210ENST00000525878 FOXO3O43524 673 aa9.29□□□□□ -0.92
CSDE1-210ENST00000525878 Q8N3U1 123 aa9.29□□□□□ -0.92
CSDE1-210ENST00000525878 NACC1Q96RE7 527 aa9.29□□□□□ -0.92
CSDE1-210ENST00000525878 SEMA6BQ9H3T3 888 aa9.29□□□□□ -0.92
CSDE1-210ENST00000525878 DNAJB12Q9NXW2 375 aaKnown RBP9.29□□□□□ -0.92
CSDE1-210ENST00000525878 KLK14Q9P0G3 267 aa9.29□□□□□ -0.92
CSDE1-210ENST00000525878 NAGPAQ9UK23 515 aa9.29□□□□□ -0.92
CSDE1-210ENST00000525878 NFKB1P19838 968 aa9.28□□□□□ -0.92
CSDE1-210ENST00000525878 GRIK4Q16099 956 aa9.28□□□□□ -0.92
CSDE1-210ENST00000525878 MYO19Q96H55 970 aa9.28□□□□□ -0.92
CSDE1-210ENST00000525878 TPSG1Q9NRR2 321 aa9.28□□□□□ -0.92
CSDE1-210ENST00000525878 A0A0A0MRY4 1105 aa9.27□□□□□ -0.93
CSDE1-210ENST00000525878 MAP3K6O95382 1288 aa9.27□□□□□ -0.93
CSDE1-210ENST00000525878 IDH3AP50213 366 aa9.27□□□□□ -0.93
CSDE1-210ENST00000525878 AFF1P51825 1210 aaKnown RBP9.27□□□□□ -0.93
CSDE1-210ENST00000525878 TRAPPC3LQ5T215 181 aa9.27□□□□□ -0.93
CSDE1-210ENST00000525878 IGFLR1Q9H665 355 aa9.27□□□□□ -0.93
CSDE1-210ENST00000525878 EPB42P16452 691 aa9.26□□□□□ -0.93
CSDE1-210ENST00000525878 TBC1D8BQ0IIM8 1120 aa9.26□□□□□ -0.93
CSDE1-210ENST00000525878 PSAPL1Q6NUJ1 521 aa9.26□□□□□ -0.93
CSDE1-210ENST00000525878 PNMA5Q96PV4 448 aa9.26□□□□□ -0.93
CSDE1-210ENST00000525878 JPH1Q9HDC5 661 aaPredicted RBP9.26□□□□□ -0.93
CSDE1-210ENST00000525878 ZFATQ9P243 1243 aa9.26□□□□□ -0.93
CSDE1-210ENST00000525878 ELNP15502 786 aa9.25□□□□□ -0.93
CSDE1-210ENST00000525878 SELPP16109 830 aa9.25□□□□□ -0.93
CSDE1-210ENST00000525878 DGKZQ13574 1117 aa9.25□□□□□ -0.93
CSDE1-210ENST00000525878 ADGRE1Q14246 886 aa9.25□□□□□ -0.93
CSDE1-210ENST00000525878 NUDT8Q8WV74 236 aa9.25□□□□□ -0.93
CSDE1-210ENST00000525878 C9orf172C9J069 976 aa9.24□□□□□ -0.93
CSDE1-210ENST00000525878 MICAL2O94851 1124 aa9.24□□□□□ -0.93
CSDE1-210ENST00000525878 ARSDP51689 593 aa9.24□□□□□ -0.93
CSDE1-210ENST00000525878 C11orf91Q3C1V1 193 aa9.24□□□□□ -0.93
CSDE1-210ENST00000525878 FAM200AQ8TCP9 573 aa9.24□□□□□ -0.93
CSDE1-210ENST00000525878 TRPM4Q8TD43 1214 aa9.24□□□□□ -0.93
CSDE1-210ENST00000525878 ZBTB42B2RXF5 422 aa9.23□□□□□ -0.93
CSDE1-210ENST00000525878 OPLAHO14841 1288 aa9.23□□□□□ -0.93
CSDE1-210ENST00000525878 GRIK5Q16478 980 aa9.23□□□□□ -0.93
CSDE1-210ENST00000525878 PCSK7Q16549 785 aa9.23□□□□□ -0.93
CSDE1-210ENST00000525878 IFT43Q96FT9 208 aa9.23□□□□□ -0.93
CSDE1-210ENST00000525878 FRRS1LQ9P0K9 344 aa9.23□□□□□ -0.93
CSDE1-210ENST00000525878 ZNF777Q9ULD5 760 aaPredicted RBP9.23□□□□□ -0.93
CSDE1-210ENST00000525878 LRFN2Q9ULH4 789 aa9.23□□□□□ -0.93
CSDE1-210ENST00000525878 RGS9O75916 674 aaPredicted RBP9.22□□□□□ -0.93
CSDE1-210ENST00000525878 MBTPS1Q14703 1052 aa9.22□□□□□ -0.93
CSDE1-210ENST00000525878 LENG1Q96BZ8 264 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms