RNA–Protein interactions for RNA: ENST00000525653.1

HHLA3-206, Transcript of HERV-H LTR-associating 3, humanhuman

TSL 3

Gene HHLA3, Length 689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-206ENST00000525653 RIPK4P57078 832 aa11.67□□□□□ -0.54
HHLA3-206ENST00000525653 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
HHLA3-206ENST00000525653 PPP1R42Q7Z4L9 355 aa11.67□□□□□ -0.54
HHLA3-206ENST00000525653 RPGRQ92834 1020 aaKnown RBP11.67□□□□□ -0.54
HHLA3-206ENST00000525653 FAM177BA6PVY3 158 aa11.66□□□□□ -0.54
HHLA3-206ENST00000525653 DDNO94850 711 aaPredicted RBP11.66□□□□□ -0.54
HHLA3-206ENST00000525653 MYL6BP14649 208 aa11.66□□□□□ -0.54
HHLA3-206ENST00000525653 HSP90AB3PQ58FF7 597 aa11.66□□□□□ -0.54
HHLA3-206ENST00000525653 ZNF34Q8IZ26 560 aa11.66□□□□□ -0.54
HHLA3-206ENST00000525653 NGEFQ8N5V2 710 aa11.66□□□□□ -0.54
HHLA3-206ENST00000525653 CRAMP1Q96RY5 1269 aa11.66□□□□□ -0.54
HHLA3-206ENST00000525653 THUMPD2Q9BTF0 503 aaKnown RBP11.66□□□□□ -0.54
HHLA3-206ENST00000525653 ZBTB12Q9Y330 459 aaPredicted RBP11.66□□□□□ -0.54
HHLA3-206ENST00000525653 ABCC12Q96J65 1359 aa11.66□□□□□ -0.54
HHLA3-206ENST00000525653 IARSP41252 1262 aaKnown RBP11.65□□□□□ -0.54
HHLA3-206ENST00000525653 TMPOP42166 694 aaKnown RBP11.65□□□□□ -0.54
HHLA3-206ENST00000525653 TTLL7Q6ZT98 887 aa11.65□□□□□ -0.54
HHLA3-206ENST00000525653 LDHDQ86WU2 507 aa11.65□□□□□ -0.54
HHLA3-206ENST00000525653 JDP2Q8WYK2 163 aa11.65□□□□□ -0.54
HHLA3-206ENST00000525653 RBM17Q96I25 401 aaKnown RBP11.65□□□□□ -0.54
HHLA3-206ENST00000525653 TMX4Q9H1E5 349 aaPredicted RBP11.65□□□□□ -0.54
HHLA3-206ENST00000525653 ZBTB3Q9H5J0 574 aa11.65□□□□□ -0.54
HHLA3-206ENST00000525653 CREBZFQ9NS37 354 aa11.65□□□□□ -0.54
HHLA3-206ENST00000525653 UBN2Q6ZU65 1347 aa11.64□□□□□ -0.55
HHLA3-206ENST00000525653 SNED1Q8TER0 1413 aa11.64□□□□□ -0.55
HHLA3-206ENST00000525653 FZD9O00144 591 aa11.64□□□□□ -0.55
HHLA3-206ENST00000525653 HTRA3P83110 453 aa11.64□□□□□ -0.55
HHLA3-206ENST00000525653 PNMA8AQ86V59 439 aaPredicted RBP11.64□□□□□ -0.55
HHLA3-206ENST00000525653 NUTM1Q86Y26 1132 aa11.64□□□□□ -0.55
HHLA3-206ENST00000525653 SYNE4Q8N205 404 aa11.64□□□□□ -0.55
HHLA3-206ENST00000525653 NLRP3Q96P20 1036 aa11.64□□□□□ -0.55
HHLA3-206ENST00000525653 TAF1DQ9H5J8 278 aaPredicted RBP11.64□□□□□ -0.55
HHLA3-206ENST00000525653 ZNF277Q9NRM2 450 aaPredicted RBP11.64□□□□□ -0.55
HHLA3-206ENST00000525653 HACL1Q9UJ83 578 aa11.64□□□□□ -0.55
HHLA3-206ENST00000525653 NTSR2O95665 410 aa11.63□□□□□ -0.55
HHLA3-206ENST00000525653 HOXB7P09629 217 aa11.63□□□□□ -0.55
HHLA3-206ENST00000525653 GPTP24298 496 aa11.63□□□□□ -0.55
HHLA3-206ENST00000525653 WDR43Q15061 677 aaKnown RBP eCLIP11.63□□□□□ -0.55
HHLA3-206ENST00000525653 SUSD4Q5VX71 490 aa11.63□□□□□ -0.55
HHLA3-206ENST00000525653 GPC2Q8N158 579 aa11.63□□□□□ -0.55
HHLA3-206ENST00000525653 RUNDC1Q96C34 613 aa11.63□□□□□ -0.55
HHLA3-206ENST00000525653 VPS33BQ9H267 617 aa11.63□□□□□ -0.55
HHLA3-206ENST00000525653 LAMB2P55268 1798 aa11.62□□□□□ -0.55
HHLA3-206ENST00000525653 ADAMTSL1Q8N6G6 1762 aa11.62□□□□□ -0.55
HHLA3-206ENST00000525653 EIF2S2P20042 333 aaKnown RBP11.62□□□□□ -0.55
HHLA3-206ENST00000525653 EIF6P56537 245 aaKnown RBP11.62□□□□□ -0.55
HHLA3-206ENST00000525653 PDIA6Q15084 440 aa11.62□□□□□ -0.55
HHLA3-206ENST00000525653 SLC10A5Q5PT55 438 aa11.62□□□□□ -0.55
HHLA3-206ENST00000525653 LRP10Q7Z4F1 713 aa11.62□□□□□ -0.55
HHLA3-206ENST00000525653 UTP14AQ9BVJ6 771 aaKnown RBP11.62□□□□□ -0.55
HHLA3-206ENST00000525653 ZNF541Q9H0D2 1346 aa11.61□□□□□ -0.55
HHLA3-206ENST00000525653 CHL1O00533 1208 aa11.61□□□□□ -0.55
HHLA3-206ENST00000525653 PPEF1O14829 653 aaPredicted RBP11.61□□□□□ -0.55
HHLA3-206ENST00000525653 EPHX2P34913 555 aa11.61□□□□□ -0.55
HHLA3-206ENST00000525653 SUPT20HQ8NEM7 779 aa11.61□□□□□ -0.55
HHLA3-206ENST00000525653 DDX21Q9NR30 783 aaKnown RBP eCLIP11.61□□□□□ -0.55
HHLA3-206ENST00000525653 PASKQ96RG2 1323 aa11.6□□□□□ -0.55
HHLA3-206ENST00000525653 TRPM7Q96QT4 1865 aa11.6□□□□□ -0.55
HHLA3-206ENST00000525653 LMOD1P29536 600 aaPredicted RBP11.6□□□□□ -0.55
HHLA3-206ENST00000525653 DDX10Q13206 875 aaKnown RBP11.6□□□□□ -0.55
HHLA3-206ENST00000525653 TMC4Q7Z404 712 aa11.6□□□□□ -0.55
HHLA3-206ENST00000525653 BBOX1O75936 387 aa11.59□□□□□ -0.55
HHLA3-206ENST00000525653 TCIRG1Q13488 830 aa11.59□□□□□ -0.55
HHLA3-206ENST00000525653 EAPPQ56P03 285 aaPredicted RBP11.59□□□□□ -0.55
HHLA3-206ENST00000525653 OLFM4Q6UX06 510 aa11.59□□□□□ -0.55
HHLA3-206ENST00000525653 COPS6Q7L5N1 327 aa11.59□□□□□ -0.55
HHLA3-206ENST00000525653 NIM1KQ8IY84 436 aa11.59□□□□□ -0.55
HHLA3-206ENST00000525653 LARGE2Q8N3Y3 721 aa11.59□□□□□ -0.55
HHLA3-206ENST00000525653 CHMP4AQ9BY43 222 aa11.59□□□□□ -0.55
HHLA3-206ENST00000525653 ATP6V0A2Q9Y487 856 aa11.59□□□□□ -0.55
HHLA3-206ENST00000525653 SH3TC1Q8TE82 1336 aa11.59□□□□□ -0.55
HHLA3-206ENST00000525653 CNTNAP1P78357 1384 aa11.58□□□□□ -0.56
HHLA3-206ENST00000525653 TMEM88BA6NKF7 163 aa11.58□□□□□ -0.56
HHLA3-206ENST00000525653 POTEIP0CG38 1075 aa11.58□□□□□ -0.56
HHLA3-206ENST00000525653 POTEJP0CG39 1038 aa11.58□□□□□ -0.56
HHLA3-206ENST00000525653 HSPA1AP0DMV8 641 aaKnown RBP11.58□□□□□ -0.56
HHLA3-206ENST00000525653 HSPA1BP0DMV9 641 aaKnown RBP11.58□□□□□ -0.56
HHLA3-206ENST00000525653 CALD1Q05682 793 aaKnown RBP11.58□□□□□ -0.56
HHLA3-206ENST00000525653 NEUROD2Q15784 382 aa11.58□□□□□ -0.56
HHLA3-206ENST00000525653 PROSER3Q2NL68 480 aa11.58□□□□□ -0.56
HHLA3-206ENST00000525653 NLRP10Q86W26 655 aa11.58□□□□□ -0.56
HHLA3-206ENST00000525653 XAGE3Q8WTP9 111 aa11.58□□□□□ -0.56
HHLA3-206ENST00000525653 CFAP44Q96MT7 982 aa11.58□□□□□ -0.56
HHLA3-206ENST00000525653 DBF4Q9UBU7 674 aaPredicted RBP11.58□□□□□ -0.56
HHLA3-206ENST00000525653 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
HHLA3-206ENST00000525653 ITGBL1O95965 494 aaPredicted RBP11.57□□□□□ -0.56
HHLA3-206ENST00000525653 HDGFL1Q5TGJ6 251 aa11.57□□□□□ -0.56
HHLA3-206ENST00000525653 DDX46Q7L014 1031 aaKnown RBP11.57□□□□□ -0.56
HHLA3-206ENST00000525653 SP8Q8IXZ3 490 aa11.57□□□□□ -0.56
HHLA3-206ENST00000525653 PLBD2Q8NHP8 589 aa11.57□□□□□ -0.56
HHLA3-206ENST00000525653 RTFDC1Q9BY42 306 aaPredicted RBP11.57□□□□□ -0.56
HHLA3-206ENST00000525653 HYPKQ9NX55 129 aa11.57□□□□□ -0.56
HHLA3-206ENST00000525653 TRMT112Q9UI30 125 aaKnown RBP11.57□□□□□ -0.56
HHLA3-206ENST00000525653 TRIM35Q9UPQ4 493 aa11.57□□□□□ -0.56
HHLA3-206ENST00000525653 LRRC37AA6NMS7 1700 aa11.57□□□□□ -0.56
HHLA3-206ENST00000525653 ABCC4O15439 1325 aa11.57□□□□□ -0.56
HHLA3-206ENST00000525653 CDHR2Q9BYE9 1310 aa11.57□□□□□ -0.56
HHLA3-206ENST00000525653 PPIP5K2O43314 1243 aa11.56□□□□□ -0.56
HHLA3-206ENST00000525653 ANXA1P04083 346 aa11.56□□□□□ -0.56
HHLA3-206ENST00000525653 HSP90B1P14625 803 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms