RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 TREHO43280 583 aa7.83□□□□□ -1.16
USP47-206ENST00000525367 GRNP28799 593 aaKnown RBP7.83□□□□□ -1.16
USP47-206ENST00000525367 IDH3AP50213 366 aa7.83□□□□□ -1.16
USP47-206ENST00000525367 ARSJQ5FYB0 599 aaPredicted RBP7.83□□□□□ -1.16
USP47-206ENST00000525367 GJD3Q8N144 294 aa7.83□□□□□ -1.16
USP47-206ENST00000525367 NUDT16Q96DE0 195 aaKnown RBP7.83□□□□□ -1.16
USP47-206ENST00000525367 GGNBP2Q9H3C7 697 aa7.83□□□□□ -1.16
USP47-206ENST00000525367 RNF19AQ9NV58 838 aa7.83□□□□□ -1.16
USP47-206ENST00000525367 KIAA1522Q9P206 1035 aaPredicted RBP7.83□□□□□ -1.16
USP47-206ENST00000525367 A0A1B0GTH6 734 aa7.82□□□□□ -1.16
USP47-206ENST00000525367 A0A1W2PNR3 127 aa7.82□□□□□ -1.16
USP47-206ENST00000525367 THBS1P07996 1170 aa7.82□□□□□ -1.16
USP47-206ENST00000525367 MZF1P28698 734 aaPredicted RBP7.82□□□□□ -1.16
USP47-206ENST00000525367 FMR1Q06787 632 aaKnown RBP eCLIP7.82□□□□□ -1.16
USP47-206ENST00000525367 DSC3Q14574 896 aa7.82□□□□□ -1.16
USP47-206ENST00000525367 GAS2L1Q99501 681 aaPredicted RBP7.82□□□□□ -1.16
USP47-206ENST00000525367 NIF3L1Q9GZT8 377 aa7.82□□□□□ -1.16
USP47-206ENST00000525367 MAPK8P45983 427 aa7.81□□□□□ -1.16
USP47-206ENST00000525367 TRIP4Q15650 581 aaPredicted RBP7.81□□□□□ -1.16
USP47-206ENST00000525367 WDR44Q5JSH3 913 aa7.81□□□□□ -1.16
USP47-206ENST00000525367 BTLAQ7Z6A9 289 aa7.81□□□□□ -1.16
USP47-206ENST00000525367 WWC3Q9ULE0 1092 aa7.81□□□□□ -1.16
USP47-206ENST00000525367 E9PSI1 815 aa7.8□□□□□ -1.16
USP47-206ENST00000525367 INPP5BP32019 993 aa7.8□□□□□ -1.16
USP47-206ENST00000525367 EHHADHQ08426 723 aa7.8□□□□□ -1.16
USP47-206ENST00000525367 EAPPQ56P03 285 aaPredicted RBP7.8□□□□□ -1.16
USP47-206ENST00000525367 MRRFQ96E11 262 aaKnown RBP7.8□□□□□ -1.16
USP47-206ENST00000525367 MAN1A2O60476 641 aa7.79□□□□□ -1.16
USP47-206ENST00000525367 TYRO3Q06418 890 aa7.79□□□□□ -1.16
USP47-206ENST00000525367 ORC1Q13415 861 aa7.79□□□□□ -1.16
USP47-206ENST00000525367 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.79□□□□□ -1.16
USP47-206ENST00000525367 C8orf34Q49A92 452 aa7.79□□□□□ -1.16
USP47-206ENST00000525367 IER5Q5VY09 327 aa7.79□□□□□ -1.16
USP47-206ENST00000525367 CMTR1Q8N1G2 835 aaKnown RBP7.78□□□□□ -1.16
USP47-206ENST00000525367 DMRTB1Q96MA1 342 aa7.78□□□□□ -1.16
USP47-206ENST00000525367 CITED4Q96RK1 184 aa7.78□□□□□ -1.16
USP47-206ENST00000525367 ZCCHC2Q9C0B9 1178 aaKnown RBP7.78□□□□□ -1.16
USP47-206ENST00000525367 CRISPLD1Q9H336 500 aa7.78□□□□□ -1.16
USP47-206ENST00000525367 CUEDC1Q9NWM3 386 aaPredicted RBP7.78□□□□□ -1.16
USP47-206ENST00000525367 RTCBQ9Y3I0 505 aaKnown RBP7.78□□□□□ -1.16
USP47-206ENST00000525367 DYRK1BQ9Y463 629 aa7.78□□□□□ -1.16
USP47-206ENST00000525367 GPC6Q9Y625 555 aaPredicted RBP7.78□□□□□ -1.16
USP47-206ENST00000525367 KCNMB2Q9Y691 235 aa7.78□□□□□ -1.16
USP47-206ENST00000525367 F11P03951 625 aa7.77□□□□□ -1.17
USP47-206ENST00000525367 ARSDP51689 593 aa7.77□□□□□ -1.17
USP47-206ENST00000525367 PTSQ03393 145 aa7.77□□□□□ -1.17
USP47-206ENST00000525367 CEP63Q96MT8 703 aa7.77□□□□□ -1.17
USP47-206ENST00000525367 FAM161BQ96MY7 647 aa7.77□□□□□ -1.17
USP47-206ENST00000525367 NEUROD4Q9HD90 331 aa7.77□□□□□ -1.17
USP47-206ENST00000525367 FOXD3Q9UJU5 478 aaPredicted RBP7.77□□□□□ -1.17
USP47-206ENST00000525367 SHROOM4Q9ULL8 1493 aa7.76□□□□□ -1.17
USP47-206ENST00000525367 LDHBP07195 334 aaKnown RBP7.76□□□□□ -1.17
USP47-206ENST00000525367 PLCB3Q01970 1234 aa7.76□□□□□ -1.17
USP47-206ENST00000525367 PDE3BQ13370 1112 aa7.76□□□□□ -1.17
USP47-206ENST00000525367 GRIN2CQ14957 1233 aa7.76□□□□□ -1.17
USP47-206ENST00000525367 HIF1AQ16665 826 aa7.76□□□□□ -1.17
USP47-206ENST00000525367 RIPOR1Q6ZS17 1223 aa7.76□□□□□ -1.17
USP47-206ENST00000525367 ALKBH8Q96BT7 664 aaKnown RBP7.76□□□□□ -1.17
USP47-206ENST00000525367 ANKIB1Q9P2G1 1089 aa7.76□□□□□ -1.17
USP47-206ENST00000525367 HCN2Q9UL51 889 aa7.76□□□□□ -1.17
USP47-206ENST00000525367 GJA3Q9Y6H8 435 aa7.76□□□□□ -1.17
USP47-206ENST00000525367 PNMA6FA0A0J9YX94 578 aa7.75□□□□□ -1.17
USP47-206ENST00000525367 ZNF326Q5BKZ1 582 aaKnown RBP7.75□□□□□ -1.17
USP47-206ENST00000525367 USPL1Q5W0Q7 1092 aa7.75□□□□□ -1.17
USP47-206ENST00000525367 PIK3R5Q8WYR1 880 aa7.75□□□□□ -1.17
USP47-206ENST00000525367 CFHR5Q9BXR6 569 aa7.75□□□□□ -1.17
USP47-206ENST00000525367 TMEM63CQ9P1W3 806 aa7.75□□□□□ -1.17
USP47-206ENST00000525367 DCDC2BA2VCK2 349 aa7.74□□□□□ -1.17
USP47-206ENST00000525367 SLC35F4A4IF30 521 aa7.74□□□□□ -1.17
USP47-206ENST00000525367 USP5P45974 858 aa7.74□□□□□ -1.17
USP47-206ENST00000525367 UBAP2LQ14157 1087 aaKnown RBP7.74□□□□□ -1.17
USP47-206ENST00000525367 COL19A1Q14993 1142 aa7.74□□□□□ -1.17
USP47-206ENST00000525367 ENOX2Q16206 610 aaKnown RBP7.74□□□□□ -1.17
USP47-206ENST00000525367 PGBD3Q8N328 593 aa7.74□□□□□ -1.17
USP47-206ENST00000525367 TMEM151AQ8N4L1 468 aa7.74□□□□□ -1.17
USP47-206ENST00000525367 DUSP9Q99956 384 aaKnown RBP7.74□□□□□ -1.17
USP47-206ENST00000525367 BRD7Q9NPI1 651 aa7.74□□□□□ -1.17
USP47-206ENST00000525367 STRN4Q9NRL3 753 aa7.74□□□□□ -1.17
USP47-206ENST00000525367 LOC105371045A0A1W2PR82 267 aa7.73□□□□□ -1.17
USP47-206ENST00000525367 UBAP1LF5GYI3 381 aa7.73□□□□□ -1.17
USP47-206ENST00000525367 PCSK2P16519 638 aa7.73□□□□□ -1.17
USP47-206ENST00000525367 SFSWAPQ12872 951 aaKnown RBP7.73□□□□□ -1.17
USP47-206ENST00000525367 CCDC155Q8N6L0 562 aa7.73□□□□□ -1.17
USP47-206ENST00000525367 CSRNP1Q96S65 589 aa7.73□□□□□ -1.17
USP47-206ENST00000525367 EIF1AYO14602 144 aaKnown RBP7.72□□□□□ -1.17
USP47-206ENST00000525367 IGSF3O75054 1194 aa7.72□□□□□ -1.17
USP47-206ENST00000525367 RECKO95980 971 aa7.72□□□□□ -1.17
USP47-206ENST00000525367 DBN1Q16643 649 aa7.72□□□□□ -1.17
USP47-206ENST00000525367 PI16Q6UXB8 463 aa7.72□□□□□ -1.17
USP47-206ENST00000525367 ZNF438Q7Z4V0 828 aa7.72□□□□□ -1.17
USP47-206ENST00000525367 FAM13BQ9NYF5 915 aa7.72□□□□□ -1.17
USP47-206ENST00000525367 PARP2Q9UGN5 583 aa7.72□□□□□ -1.17
USP47-206ENST00000525367 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.72□□□□□ -1.17
USP47-206ENST00000525367 KHNYNO15037 678 aaKnown RBP7.71□□□□□ -1.18
USP47-206ENST00000525367 XYLBO75191 536 aa7.71□□□□□ -1.18
USP47-206ENST00000525367 TNFRSF21O75509 655 aa7.71□□□□□ -1.18
USP47-206ENST00000525367 IRS1P35568 1242 aa7.71□□□□□ -1.18
USP47-206ENST00000525367 RASSF7Q02833 373 aa7.71□□□□□ -1.18
USP47-206ENST00000525367 KRT25Q7Z3Z0 450 aa7.71□□□□□ -1.18
USP47-206ENST00000525367 NLRP8Q86W28 1048 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms