RNA–Protein interactions for RNA: ENST00000524568.1

NDUFS3-202, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 733 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-202ENST00000524568 ZNF853P0CG23 659 aa25.46■■□□□ 1.67
NDUFS3-202ENST00000524568 C16orf71Q8IYS4 520 aaPredicted RBP25.46■■□□□ 1.67
NDUFS3-202ENST00000524568 COL4A5P29400 1685 aa25.45■■□□□ 1.67
NDUFS3-202ENST00000524568 SOGA3Q5TF21 947 aa25.45■■□□□ 1.66
NDUFS3-202ENST00000524568 HDGFL1Q5TGJ6 251 aa25.45■■□□□ 1.66
NDUFS3-202ENST00000524568 SYNE4Q8N205 404 aa25.45■■□□□ 1.66
NDUFS3-202ENST00000524568 ZNF277Q9NRM2 450 aaPredicted RBP25.45■■□□□ 1.66
NDUFS3-202ENST00000524568 DDX60Q8IY21 1712 aaKnown RBP25.45■■□□□ 1.66
NDUFS3-202ENST00000524568 HTRA3P83110 453 aa25.44■■□□□ 1.66
NDUFS3-202ENST00000524568 DUSP27Q5VZP5 1158 aa25.44■■□□□ 1.66
NDUFS3-202ENST00000524568 ZEB1P37275 1124 aaPredicted RBP25.43■■□□□ 1.66
NDUFS3-202ENST00000524568 PARP10Q53GL7 1025 aa25.43■■□□□ 1.66
NDUFS3-202ENST00000524568 ALDH1B1P30837 517 aa25.42■■□□□ 1.66
NDUFS3-202ENST00000524568 HOXA10P31260 410 aaPredicted RBP25.42■■□□□ 1.66
NDUFS3-202ENST00000524568 FKBP4Q02790 459 aaKnown RBP eCLIP25.42■■□□□ 1.66
NDUFS3-202ENST00000524568 NLRP10Q86W26 655 aa25.42■■□□□ 1.66
NDUFS3-202ENST00000524568 DDNO94850 711 aaPredicted RBP25.41■■□□□ 1.66
NDUFS3-202ENST00000524568 VEGFAP15692 232 aaPredicted RBP25.41■■□□□ 1.66
NDUFS3-202ENST00000524568 PPP1R42Q7Z4L9 355 aa25.41■■□□□ 1.66
NDUFS3-202ENST00000524568 RPGRQ92834 1020 aaKnown RBP25.41■■□□□ 1.66
NDUFS3-202ENST00000524568 UTP14AQ9BVJ6 771 aaKnown RBP25.41■■□□□ 1.66
NDUFS3-202ENST00000524568 ZNF541Q9H0D2 1346 aa25.4■■□□□ 1.66
NDUFS3-202ENST00000524568 HOXB7P09629 217 aa25.4■■□□□ 1.66
NDUFS3-202ENST00000524568 IFT57Q9NWB7 429 aa25.4■■□□□ 1.66
NDUFS3-202ENST00000524568 ELL2O00472 640 aaPredicted RBP25.39■■□□□ 1.66
NDUFS3-202ENST00000524568 TCERG1O14776 1098 aaKnown RBP25.39■■□□□ 1.66
NDUFS3-202ENST00000524568 APLP1P51693 650 aa25.39■■□□□ 1.66
NDUFS3-202ENST00000524568 TCIRG1Q13488 830 aa25.39■■□□□ 1.66
NDUFS3-202ENST00000524568 COL4A1P02462 1669 aa25.39■■□□□ 1.65
NDUFS3-202ENST00000524568 ZNF316A6NFI3 1004 aaPredicted RBP25.38■■□□□ 1.65
NDUFS3-202ENST00000524568 HCLS1P14317 486 aaPredicted RBP25.38■■□□□ 1.65
NDUFS3-202ENST00000524568 FSTL1Q12841 308 aa25.38■■□□□ 1.65
NDUFS3-202ENST00000524568 SLC10A5Q5PT55 438 aa25.38■■□□□ 1.65
NDUFS3-202ENST00000524568 DPY19L2Q6NUT2 758 aa25.37■■□□□ 1.65
NDUFS3-202ENST00000524568 RTKN2Q8IZC4 609 aa25.37■■□□□ 1.65
NDUFS3-202ENST00000524568 C8orf58Q8NAV2 365 aa25.37■■□□□ 1.65
NDUFS3-202ENST00000524568 DBF4Q9UBU7 674 aaPredicted RBP25.37■■□□□ 1.65
NDUFS3-202ENST00000524568 SCN4AP35499 1836 aa25.36■■□□□ 1.65
NDUFS3-202ENST00000524568 POTEIP0CG38 1075 aa25.36■■□□□ 1.65
NDUFS3-202ENST00000524568 POTEJP0CG39 1038 aa25.36■■□□□ 1.65
NDUFS3-202ENST00000524568 DNAJC5GQ8N7S2 189 aa25.36■■□□□ 1.65
NDUFS3-202ENST00000524568 SMC1BQ8NDV3 1235 aa25.36■■□□□ 1.65
NDUFS3-202ENST00000524568 CRAMP1Q96RY5 1269 aa25.36■■□□□ 1.65
NDUFS3-202ENST00000524568 PPEF1O14829 653 aaPredicted RBP25.35■■□□□ 1.65
NDUFS3-202ENST00000524568 IARSP41252 1262 aaKnown RBP25.35■■□□□ 1.65
NDUFS3-202ENST00000524568 GNAI1P63096 354 aa25.35■■□□□ 1.65
NDUFS3-202ENST00000524568 HSP90AB3PQ58FF7 597 aa25.35■■□□□ 1.65
NDUFS3-202ENST00000524568 PLBD2Q8NHP8 589 aa25.35■■□□□ 1.65
NDUFS3-202ENST00000524568 RBM17Q96I25 401 aaKnown RBP25.35■■□□□ 1.65
NDUFS3-202ENST00000524568 NLRP3Q96P20 1036 aa25.35■■□□□ 1.65
NDUFS3-202ENST00000524568 ABCC4O15439 1325 aa25.35■■□□□ 1.65
NDUFS3-202ENST00000524568 ATP5J2-PTCD1G3V325 749 aa25.34■■□□□ 1.65
NDUFS3-202ENST00000524568 PHAXQ9H814 394 aaKnown RBP25.34■■□□□ 1.65
NDUFS3-202ENST00000524568 TRMT112Q9UI30 125 aaKnown RBP25.34■■□□□ 1.65
NDUFS3-202ENST00000524568 ANKRD13DQ6ZTN6 518 aa25.33■■□□□ 1.65
NDUFS3-202ENST00000524568 TSPYL6Q8N831 410 aa25.33■■□□□ 1.65
NDUFS3-202ENST00000524568 TSR2Q969E8 191 aaKnown RBP25.33■■□□□ 1.65
NDUFS3-202ENST00000524568 PSMD1Q99460 953 aa25.33■■□□□ 1.65
NDUFS3-202ENST00000524568 ISCA1Q9BUE6 129 aa25.33■■□□□ 1.65
NDUFS3-202ENST00000524568 HYPKQ9NX55 129 aa25.32■■□□□ 1.64
NDUFS3-202ENST00000524568 RNF123Q5XPI4 1314 aa25.32■■□□□ 1.64
NDUFS3-202ENST00000524568 SH3TC1Q8TE82 1336 aa25.32■■□□□ 1.64
NDUFS3-202ENST00000524568 LTBP1Q14766 1721 aa25.32■■□□□ 1.64
NDUFS3-202ENST00000524568 MRS2Q9HD23 443 aa25.31■■□□□ 1.64
NDUFS3-202ENST00000524568 LRRC37AA6NMS7 1700 aa25.31■■□□□ 1.64
NDUFS3-202ENST00000524568 CALD1Q05682 793 aaKnown RBP25.3■■□□□ 1.64
NDUFS3-202ENST00000524568 ADAMTSL1Q8N6G6 1762 aa25.29■■□□□ 1.64
NDUFS3-202ENST00000524568 FZD9O00144 591 aa25.29■■□□□ 1.64
NDUFS3-202ENST00000524568 RTL5Q5HYW3 569 aaPredicted RBP25.29■■□□□ 1.64
NDUFS3-202ENST00000524568 FAM89AQ96GI7 184 aa25.29■■□□□ 1.64
NDUFS3-202ENST00000524568 L3MBTL3Q96JM7 780 aaPredicted RBP25.29■■□□□ 1.64
NDUFS3-202ENST00000524568 DUOX1Q9NRD9 1551 aa25.28■■□□□ 1.64
NDUFS3-202ENST00000524568 CC2D2BQ6DHV5 1058 aa25.28■■□□□ 1.64
NDUFS3-202ENST00000524568 WWC1Q8IX03 1113 aa25.28■■□□□ 1.64
NDUFS3-202ENST00000524568 ATP6V0A2Q9Y487 856 aa25.28■■□□□ 1.64
NDUFS3-202ENST00000524568 PCNTO95613 3336 aa25.27■■□□□ 1.64
NDUFS3-202ENST00000524568 TAF1DQ9H5J8 278 aaPredicted RBP25.26■■□□□ 1.63
NDUFS3-202ENST00000524568 ANP32CO43423 234 aa25.25■■□□□ 1.63
NDUFS3-202ENST00000524568 CCDC27Q2M243 656 aa25.25■■□□□ 1.63
NDUFS3-202ENST00000524568 RIC3Q7Z5B4 369 aa25.24■■□□□ 1.63
NDUFS3-202ENST00000524568 GOLGA2Q08379 1002 aa25.23■■□□□ 1.63
NDUFS3-202ENST00000524568 AOC3Q16853 763 aa25.23■■□□□ 1.63
NDUFS3-202ENST00000524568 LARGE2Q8N3Y3 721 aa25.23■■□□□ 1.63
NDUFS3-202ENST00000524568 MYD88Q99836 296 aa25.23■■□□□ 1.63
NDUFS3-202ENST00000524568 SALL2Q9Y467 1007 aaPredicted RBP25.23■■□□□ 1.63
NDUFS3-202ENST00000524568 GRAPQ13588 217 aa25.22■■□□□ 1.63
NDUFS3-202ENST00000524568 CHADLQ6NUI6 762 aa25.22■■□□□ 1.63
NDUFS3-202ENST00000524568 DDX46Q7L014 1031 aaKnown RBP25.22■■□□□ 1.63
NDUFS3-202ENST00000524568 GRAPLQ8TC17 118 aaPredicted RBP25.22■■□□□ 1.63
NDUFS3-202ENST00000524568 JDP2Q8WYK2 163 aa25.22■■□□□ 1.63
NDUFS3-202ENST00000524568 JARID2Q92833 1246 aaPredicted RBP25.22■■□□□ 1.63
NDUFS3-202ENST00000524568 KLRG1Q96E93 195 aa25.22■■□□□ 1.63
NDUFS3-202ENST00000524568 TRIM28Q13263 835 aaKnown RBP25.21■■□□□ 1.63
NDUFS3-202ENST00000524568 CELF1Q92879 486 aaKnown RBP25.21■■□□□ 1.63
NDUFS3-202ENST00000524568 IQCA1LA6NCM1 817 aa25.2■■□□□ 1.62
NDUFS3-202ENST00000524568 PPIP5K2O43314 1243 aa25.2■■□□□ 1.62
NDUFS3-202ENST00000524568 BBOX1O75936 387 aa25.2■■□□□ 1.62
NDUFS3-202ENST00000524568 SP8Q8IXZ3 490 aa25.2■■□□□ 1.62
NDUFS3-202ENST00000524568 GPC2Q8N158 579 aa25.2■■□□□ 1.62
NDUFS3-202ENST00000524568 HACL1Q9UJ83 578 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms