RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 SLC10A5Q5PT55 438 aa21.97■■□□□ 1.11
SPIDR-221ENST00000523814 SYNE4Q8N205 404 aa21.97■■□□□ 1.11
SPIDR-221ENST00000523814 RPGRQ92834 1020 aaKnown RBP21.97■■□□□ 1.11
SPIDR-221ENST00000523814 CRAMP1Q96RY5 1269 aa21.97■■□□□ 1.11
SPIDR-221ENST00000523814 COPS6Q7L5N1 327 aa21.96■■□□□ 1.11
SPIDR-221ENST00000523814 L3MBTL3Q96JM7 780 aaPredicted RBP21.96■■□□□ 1.11
SPIDR-221ENST00000523814 PSMD1Q99460 953 aa21.96■■□□□ 1.11
SPIDR-221ENST00000523814 DDX21Q9NR30 783 aaKnown RBP eCLIP21.96■■□□□ 1.11
SPIDR-221ENST00000523814 KRT24Q2M2I5 525 aa21.95■■□□□ 1.1
SPIDR-221ENST00000523814 GRIPAP1Q4V328 841 aa21.95■■□□□ 1.1
SPIDR-221ENST00000523814 NECTIN2Q92692 538 aa21.95■■□□□ 1.1
SPIDR-221ENST00000523814 RBM17Q96I25 401 aaKnown RBP21.95■■□□□ 1.1
SPIDR-221ENST00000523814 UTP14AQ9BVJ6 771 aaKnown RBP21.95■■□□□ 1.1
SPIDR-221ENST00000523814 SNED1Q8TER0 1413 aa21.95■■□□□ 1.1
SPIDR-221ENST00000523814 IARSP41252 1262 aaKnown RBP21.94■■□□□ 1.1
SPIDR-221ENST00000523814 C3orf67Q6ZVT6 689 aa21.94■■□□□ 1.1
SPIDR-221ENST00000523814 JMYQ8N9B5 988 aa21.94■■□□□ 1.1
SPIDR-221ENST00000523814 XAGE3Q8WTP9 111 aa21.94■■□□□ 1.1
SPIDR-221ENST00000523814 LAS1LQ9Y4W2 734 aaKnown RBP21.94■■□□□ 1.1
SPIDR-221ENST00000523814 IQCA1LA6NCM1 817 aa21.93■■□□□ 1.1
SPIDR-221ENST00000523814 FZD9O00144 591 aa21.93■■□□□ 1.1
SPIDR-221ENST00000523814 HSP90AB3PQ58FF7 597 aa21.93■■□□□ 1.1
SPIDR-221ENST00000523814 NLRP3Q96P20 1036 aa21.93■■□□□ 1.1
SPIDR-221ENST00000523814 RNF123Q5XPI4 1314 aa21.92■■□□□ 1.1
SPIDR-221ENST00000523814 HOXB7P09629 217 aa21.92■■□□□ 1.1
SPIDR-221ENST00000523814 AIMP1Q12904 312 aaKnown RBP21.92■■□□□ 1.1
SPIDR-221ENST00000523814 CHADLQ6NUI6 762 aa21.92■■□□□ 1.1
SPIDR-221ENST00000523814 CFAP44Q96MT7 982 aa21.92■■□□□ 1.1
SPIDR-221ENST00000523814 ZNF541Q9H0D2 1346 aa21.91■■□□□ 1.1
SPIDR-221ENST00000523814 TCIRG1Q13488 830 aa21.91■■□□□ 1.1
SPIDR-221ENST00000523814 IFFO2Q5TF58 517 aa21.91■■□□□ 1.1
SPIDR-221ENST00000523814 NLRP10Q86W26 655 aa21.91■■□□□ 1.1
SPIDR-221ENST00000523814 TAF1DQ9H5J8 278 aaPredicted RBP21.9■■□□□ 1.1
SPIDR-221ENST00000523814 CHPF2Q9P2E5 772 aa21.9■■□□□ 1.1
SPIDR-221ENST00000523814 POTEIP0CG38 1075 aa21.89■■□□□ 1.09
SPIDR-221ENST00000523814 POTEJP0CG39 1038 aa21.89■■□□□ 1.09
SPIDR-221ENST00000523814 JDP2Q8WYK2 163 aa21.89■■□□□ 1.09
SPIDR-221ENST00000523814 PPEF1O14829 653 aaPredicted RBP21.88■■□□□ 1.09
SPIDR-221ENST00000523814 ZNF853P0CG23 659 aa21.88■■□□□ 1.09
SPIDR-221ENST00000523814 HDGFL1Q5TGJ6 251 aa21.88■■□□□ 1.09
SPIDR-221ENST00000523814 DBF4Q9UBU7 674 aaPredicted RBP21.88■■□□□ 1.09
SPIDR-221ENST00000523814 APAF1O14727 1248 aa21.87■■□□□ 1.09
SPIDR-221ENST00000523814 LDHDQ86WU2 507 aa21.87■■□□□ 1.09
SPIDR-221ENST00000523814 GPC2Q8N158 579 aa21.87■■□□□ 1.09
SPIDR-221ENST00000523814 PLBD2Q8NHP8 589 aa21.87■■□□□ 1.09
SPIDR-221ENST00000523814 MBIPQ9NS73 344 aa21.87■■□□□ 1.09
SPIDR-221ENST00000523814 ATP6V0A2Q9Y487 856 aa21.87■■□□□ 1.09
SPIDR-221ENST00000523814 SCN4AP35499 1836 aa21.86■■□□□ 1.09
SPIDR-221ENST00000523814 BBOX1O75936 387 aa21.86■■□□□ 1.09
SPIDR-221ENST00000523814 DUSP27Q5VZP5 1158 aa21.86■■□□□ 1.09
SPIDR-221ENST00000523814 ANKRD13DQ6ZTN6 518 aa21.86■■□□□ 1.09
SPIDR-221ENST00000523814 TRMT112Q9UI30 125 aaKnown RBP21.86■■□□□ 1.09
SPIDR-221ENST00000523814 HACL1Q9UJ83 578 aa21.86■■□□□ 1.09
SPIDR-221ENST00000523814 TCERG1O14776 1098 aaKnown RBP21.85■■□□□ 1.09
SPIDR-221ENST00000523814 HCLS1P14317 486 aaPredicted RBP21.85■■□□□ 1.09
SPIDR-221ENST00000523814 HYPKQ9NX55 129 aa21.85■■□□□ 1.09
SPIDR-221ENST00000523814 SH3TC1Q8TE82 1336 aa21.84■■□□□ 1.09
SPIDR-221ENST00000523814 EPHX2P34913 555 aa21.84■■□□□ 1.09
SPIDR-221ENST00000523814 CALD1Q05682 793 aaKnown RBP21.84■■□□□ 1.09
SPIDR-221ENST00000523814 SLC51AQ86UW1 340 aa21.84■■□□□ 1.09
SPIDR-221ENST00000523814 TMX4Q9H1E5 349 aaPredicted RBP21.84■■□□□ 1.09
SPIDR-221ENST00000523814 VPS33BQ9H267 617 aa21.84■■□□□ 1.09
SPIDR-221ENST00000523814 IFT57Q9NWB7 429 aa21.84■■□□□ 1.09
SPIDR-221ENST00000523814 ABCC4O15439 1325 aa21.83■■□□□ 1.09
SPIDR-221ENST00000523814 EIF6P56537 245 aaKnown RBP21.83■■□□□ 1.09
SPIDR-221ENST00000523814 PNMA8AQ86V59 439 aaPredicted RBP21.83■■□□□ 1.09
SPIDR-221ENST00000523814 SP8Q8IXZ3 490 aa21.83■■□□□ 1.09
SPIDR-221ENST00000523814 LARGE2Q8N3Y3 721 aa21.83■■□□□ 1.09
SPIDR-221ENST00000523814 ISCA1Q9BUE6 129 aa21.83■■□□□ 1.09
SPIDR-221ENST00000523814 CREBZFQ9NS37 354 aa21.83■■□□□ 1.09
SPIDR-221ENST00000523814 ITGBL1O95965 494 aaPredicted RBP21.82■■□□□ 1.08
SPIDR-221ENST00000523814 GNAI1P63096 354 aa21.82■■□□□ 1.08
SPIDR-221ENST00000523814 RTFDC1Q9BY42 306 aaPredicted RBP21.82■■□□□ 1.08
SPIDR-221ENST00000523814 COL4A5P29400 1685 aa21.82■■□□□ 1.08
SPIDR-221ENST00000523814 ANKRD36CQ5JPF3 1778 aa21.82■■□□□ 1.08
SPIDR-221ENST00000523814 PASKQ96RG2 1323 aa21.81■■□□□ 1.08
SPIDR-221ENST00000523814 TRIM28Q13263 835 aaKnown RBP21.81■■□□□ 1.08
SPIDR-221ENST00000523814 EAPPQ56P03 285 aaPredicted RBP21.81■■□□□ 1.08
SPIDR-221ENST00000523814 DDX46Q7L014 1031 aaKnown RBP21.81■■□□□ 1.08
SPIDR-221ENST00000523814 NIM1KQ8IY84 436 aa21.79■■□□□ 1.08
SPIDR-221ENST00000523814 SUPT20HQ8NEM7 779 aa21.79■■□□□ 1.08
SPIDR-221ENST00000523814 CLEC11AQ9Y240 323 aa21.79■■□□□ 1.08
SPIDR-221ENST00000523814 GJA3Q9Y6H8 435 aa21.79■■□□□ 1.08
SPIDR-221ENST00000523814 ATP5J2-PTCD1G3V325 749 aa21.78■■□□□ 1.08
SPIDR-221ENST00000523814 PPIP5K2O43314 1243 aa21.78■■□□□ 1.08
SPIDR-221ENST00000523814 GRAPQ13588 217 aa21.78■■□□□ 1.08
SPIDR-221ENST00000523814 GRAPLQ8TC17 118 aaPredicted RBP21.78■■□□□ 1.08
SPIDR-221ENST00000523814 FAM89AQ96GI7 184 aa21.78■■□□□ 1.08
SPIDR-221ENST00000523814 SF3B3Q15393 1217 aaKnown RBP21.77■■□□□ 1.08
SPIDR-221ENST00000523814 AOC3Q16853 763 aa21.77■■□□□ 1.08
SPIDR-221ENST00000523814 DPP8Q6V1X1 898 aaPredicted RBP21.77■■□□□ 1.08
SPIDR-221ENST00000523814 TMC4Q7Z404 712 aa21.77■■□□□ 1.08
SPIDR-221ENST00000523814 MPNDQ8N594 471 aa21.77■■□□□ 1.08
SPIDR-221ENST00000523814 ELL2O00472 640 aaPredicted RBP21.76■■□□□ 1.07
SPIDR-221ENST00000523814 SCNN1DP51172 638 aa21.76■■□□□ 1.07
SPIDR-221ENST00000523814 C8orf58Q8NAV2 365 aa21.76■■□□□ 1.07
SPIDR-221ENST00000523814 ZNF428Q96B54 188 aa21.76■■□□□ 1.07
SPIDR-221ENST00000523814 ZNRF3Q9ULT6 936 aa21.76■■□□□ 1.07
SPIDR-221ENST00000523814 PCNTO95613 3336 aa21.76■■□□□ 1.07
SPIDR-221ENST00000523814 LAMB2P55268 1798 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms