RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 SERPINB4P48594 390 aa9.16□□□□□ -0.94
LINC00534-203ENST00000523406 POLMQ9NP87 494 aaPredicted RBP9.16□□□□□ -0.94
LINC00534-203ENST00000523406 SEPT3Q9UH03 358 aa9.16□□□□□ -0.94
LINC00534-203ENST00000523406 ADGBQ8N7X0 1667 aa9.16□□□□□ -0.94
LINC00534-203ENST00000523406 ASXL2Q76L83 1435 aa9.15□□□□□ -0.94
LINC00534-203ENST00000523406 EML1O00423 815 aa9.15□□□□□ -0.94
LINC00534-203ENST00000523406 BMP1P13497 986 aa9.15□□□□□ -0.94
LINC00534-203ENST00000523406 HIRAP54198 1017 aaPredicted RBP9.15□□□□□ -0.94
LINC00534-203ENST00000523406 C6orf118Q5T5N4 469 aa9.15□□□□□ -0.94
LINC00534-203ENST00000523406 RHBDD1Q8TEB9 315 aa9.15□□□□□ -0.94
LINC00534-203ENST00000523406 MTMR7Q9Y216 660 aa9.15□□□□□ -0.94
LINC00534-203ENST00000523406 SAMD9LQ8IVG5 1584 aa9.15□□□□□ -0.95
LINC00534-203ENST00000523406 MYO5CQ9NQX4 1742 aa9.14□□□□□ -0.95
LINC00534-203ENST00000523406 CDC42BPBQ9Y5S2 1711 aa9.14□□□□□ -0.95
LINC00534-203ENST00000523406 NUP155O75694 1391 aa9.14□□□□□ -0.95
LINC00534-203ENST00000523406 CROCC2H7BZ55 1655 aa9.14□□□□□ -0.95
LINC00534-203ENST00000523406 SPATA31C2B4DYI2 1134 aa9.14□□□□□ -0.95
LINC00534-203ENST00000523406 AXIN1O15169 862 aa9.14□□□□□ -0.95
LINC00534-203ENST00000523406 NOS2P35228 1153 aa9.14□□□□□ -0.95
LINC00534-203ENST00000523406 SCARF1Q14162 830 aa9.14□□□□□ -0.95
LINC00534-203ENST00000523406 SLC27A3Q5K4L6 730 aa9.14□□□□□ -0.95
LINC00534-203ENST00000523406 TMEM214Q6NUQ4 689 aaKnown RBP9.14□□□□□ -0.95
LINC00534-203ENST00000523406 RNF217Q8TC41 542 aa9.14□□□□□ -0.95
LINC00534-203ENST00000523406 NIFKQ9BYG3 293 aaKnown RBP9.14□□□□□ -0.95
LINC00534-203ENST00000523406 CABP1Q9NZU7 370 aa9.14□□□□□ -0.95
LINC00534-203ENST00000523406 SYCP2Q9BX26 1530 aa9.14□□□□□ -0.95
LINC00534-203ENST00000523406 SERTM1A2A2V5 107 aa9.13□□□□□ -0.95
LINC00534-203ENST00000523406 SH3PXD2AQ5TCZ1 1133 aa9.13□□□□□ -0.95
LINC00534-203ENST00000523406 EGFL7Q9UHF1 273 aa9.13□□□□□ -0.95
LINC00534-203ENST00000523406 CHMP3Q9Y3E7 222 aa9.13□□□□□ -0.95
LINC00534-203ENST00000523406 SPAG9O60271 1321 aaKnown RBP9.12□□□□□ -0.95
LINC00534-203ENST00000523406 SOS2Q07890 1332 aaPredicted RBP9.12□□□□□ -0.95
LINC00534-203ENST00000523406 SOWAHDA6NJG2 315 aa9.12□□□□□ -0.95
LINC00534-203ENST00000523406 GTF2E1P29083 439 aaPredicted RBP9.12□□□□□ -0.95
LINC00534-203ENST00000523406 C4orf17Q53FE4 359 aa9.12□□□□□ -0.95
LINC00534-203ENST00000523406 GNASQ5JWF2 1037 aa9.12□□□□□ -0.95
LINC00534-203ENST00000523406 CYB5RLQ6IPT4 315 aa9.12□□□□□ -0.95
LINC00534-203ENST00000523406 SND1Q7KZF4 910 aaKnown RBP eCLIP9.12□□□□□ -0.95
LINC00534-203ENST00000523406 GTF3C2Q8WUA4 911 aaPredicted RBP9.12□□□□□ -0.95
LINC00534-203ENST00000523406 L3MBTL2Q969R5 705 aa9.12□□□□□ -0.95
LINC00534-203ENST00000523406 VTI1AQ96AJ9 217 aa9.12□□□□□ -0.95
LINC00534-203ENST00000523406 AAASQ9NRG9 546 aa9.12□□□□□ -0.95
LINC00534-203ENST00000523406 ANKRD30BQ9BXX2 1392 aa9.12□□□□□ -0.95
LINC00534-203ENST00000523406 TTLL8A6PVC2 850 aa9.11□□□□□ -0.95
LINC00534-203ENST00000523406 NAA30Q147X3 362 aaPredicted RBP9.11□□□□□ -0.95
LINC00534-203ENST00000523406 ZFP42Q96MM3 310 aa9.11□□□□□ -0.95
LINC00534-203ENST00000523406 QTRT2Q9H974 415 aaKnown RBP9.11□□□□□ -0.95
LINC00534-203ENST00000523406 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.11□□□□□ -0.951e-6■■■■■ 62.9
LINC00534-203ENST00000523406 PARP3Q9Y6F1 533 aa9.11□□□□□ -0.95
LINC00534-203ENST00000523406 DNMT3AQ9Y6K1 912 aaPredicted RBP9.11□□□□□ -0.95
LINC00534-203ENST00000523406 ARAP3Q8WWN8 1544 aa9.1□□□□□ -0.95
LINC00534-203ENST00000523406 ST8SIA5O15466 376 aa9.1□□□□□ -0.95
LINC00534-203ENST00000523406 LYSMD3Q7Z3D4 306 aa9.1□□□□□ -0.95
LINC00534-203ENST00000523406 AFAP1Q8N556 730 aa9.1□□□□□ -0.95
LINC00534-203ENST00000523406 SAP130Q9H0E3 1048 aa9.1□□□□□ -0.95
LINC00534-203ENST00000523406 FANCAO15360 1455 aa9.09□□□□□ -0.95
LINC00534-203ENST00000523406 PZPP20742 1482 aa9.09□□□□□ -0.95
LINC00534-203ENST00000523406 ICMTO60725 284 aa9.09□□□□□ -0.95
LINC00534-203ENST00000523406 ABL1P00519 1130 aa9.09□□□□□ -0.95
LINC00534-203ENST00000523406 POU4F2Q12837 409 aa9.09□□□□□ -0.95
LINC00534-203ENST00000523406 ZNF211Q13398 564 aaPredicted RBP9.09□□□□□ -0.95
LINC00534-203ENST00000523406 WDR44Q5JSH3 913 aa9.09□□□□□ -0.95
LINC00534-203ENST00000523406 TMCO4Q5TGY1 634 aa9.09□□□□□ -0.95
LINC00534-203ENST00000523406 C16orf46Q6P387 395 aa9.09□□□□□ -0.95
LINC00534-203ENST00000523406 NBPF10Q6P3W6 841 aaKnown RBP9.09□□□□□ -0.95
LINC00534-203ENST00000523406 PRICKLE2Q7Z3G6 844 aa9.09□□□□□ -0.95
LINC00534-203ENST00000523406 HELQQ8TDG4 1101 aa9.09□□□□□ -0.95
LINC00534-203ENST00000523406 MYO19Q96H55 970 aa9.09□□□□□ -0.95
LINC00534-203ENST00000523406 ATP13A2Q9NQ11 1180 aa9.09□□□□□ -0.95
LINC00534-203ENST00000523406 ZNF232Q9UNY5 417 aa9.09□□□□□ -0.95
LINC00534-203ENST00000523406 HCN4Q9Y3Q4 1203 aa9.09□□□□□ -0.95
LINC00534-203ENST00000523406 ARHGEF12Q9NZN5 1544 aa9.09□□□□□ -0.95
LINC00534-203ENST00000523406 DENND4BO75064 1496 aaPredicted RBP9.08□□□□□ -0.96
LINC00534-203ENST00000523406 MAST1Q9Y2H9 1570 aa9.08□□□□□ -0.96
LINC00534-203ENST00000523406 TRAPPC8Q9Y2L5 1435 aa9.08□□□□□ -0.96
LINC00534-203ENST00000523406 PLA2G4AP47712 749 aa9.08□□□□□ -0.96
LINC00534-203ENST00000523406 COX20Q5RI15 118 aa9.08□□□□□ -0.96
LINC00534-203ENST00000523406 C1orf53Q5VUE5 145 aa9.08□□□□□ -0.96
LINC00534-203ENST00000523406 ALDH16A1Q8IZ83 802 aa9.08□□□□□ -0.96
LINC00534-203ENST00000523406 IRX2Q9BZI1 471 aaPredicted RBP9.08□□□□□ -0.96
LINC00534-203ENST00000523406 DACH1Q9UI36 760 aa9.08□□□□□ -0.96
LINC00534-203ENST00000523406 CD109Q6YHK3 1445 aa9.07□□□□□ -0.96
LINC00534-203ENST00000523406 SCAPERQ9BY12 1400 aa9.07□□□□□ -0.96
LINC00534-203ENST00000523406 ABCC1P33527 1531 aa9.07□□□□□ -0.96
LINC00534-203ENST00000523406 ABCA9Q8IUA7 1624 aa9.07□□□□□ -0.96
LINC00534-203ENST00000523406 TXLNAP40222 546 aa9.07□□□□□ -0.96
LINC00534-203ENST00000523406 FKBP4Q02790 459 aaKnown RBP eCLIP9.07□□□□□ -0.96
LINC00534-203ENST00000523406 SF3B2Q13435 895 aaKnown RBP9.07□□□□□ -0.96
LINC00534-203ENST00000523406 ECM1Q16610 540 aa9.07□□□□□ -0.96
LINC00534-203ENST00000523406 PHACTR1Q9C0D0 580 aa9.07□□□□□ -0.96
LINC00534-203ENST00000523406 ANO2Q9NQ90 1003 aa9.07□□□□□ -0.96
LINC00534-203ENST00000523406 LRFN2Q9ULH4 789 aa9.07□□□□□ -0.96
LINC00534-203ENST00000523406 ADGRL1O94910 1474 aa9.07□□□□□ -0.96
LINC00534-203ENST00000523406 RTEL1-TNFRSF6BF6WH68 1400 aa9.06□□□□□ -0.96
LINC00534-203ENST00000523406 DUOX2Q9NRD8 1548 aa9.06□□□□□ -0.96
LINC00534-203ENST00000523406 FIGNL2A6NMB9 653 aa9.06□□□□□ -0.96
LINC00534-203ENST00000523406 H3BRB1 525 aa9.06□□□□□ -0.96
LINC00534-203ENST00000523406 TNFRSF10BO14763 440 aa9.06□□□□□ -0.96
LINC00534-203ENST00000523406 NPR3P17342 541 aa9.06□□□□□ -0.96
LINC00534-203ENST00000523406 PHKA2P46019 1235 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms