RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 APLP1P51693 650 aa26.95■■□□□ 1.9
SDCBP-209ENST00000522243 FKBP4Q02790 459 aaKnown RBP eCLIP26.95■■□□□ 1.9
SDCBP-209ENST00000522243 DUSP27Q5VZP5 1158 aa26.95■■□□□ 1.9
SDCBP-209ENST00000522243 C3orf67Q6ZVT6 689 aa26.95■■□□□ 1.9
SDCBP-209ENST00000522243 UTP14AQ9BVJ6 771 aaKnown RBP26.95■■□□□ 1.9
SDCBP-209ENST00000522243 RIC1Q4ADV7 1423 aa26.94■■□□□ 1.9
SDCBP-209ENST00000522243 POTECB2RU33 542 aa26.94■■□□□ 1.9
SDCBP-209ENST00000522243 ZNF277Q9NRM2 450 aaPredicted RBP26.94■■□□□ 1.9
SDCBP-209ENST00000522243 WDR90Q96KV7 1748 aa26.93■■□□□ 1.9
SDCBP-209ENST00000522243 FSTL1Q12841 308 aa26.93■■□□□ 1.9
SDCBP-209ENST00000522243 RTKN2Q8IZC4 609 aa26.93■■□□□ 1.9
SDCBP-209ENST00000522243 ZNF428Q96B54 188 aa26.93■■□□□ 1.9
SDCBP-209ENST00000522243 DDNO94850 711 aaPredicted RBP26.92■■□□□ 1.9
SDCBP-209ENST00000522243 HOXB7P09629 217 aa26.92■■□□□ 1.9
SDCBP-209ENST00000522243 ZNF853P0CG23 659 aa26.92■■□□□ 1.9
SDCBP-209ENST00000522243 TCIRG1Q13488 830 aa26.92■■□□□ 1.9
SDCBP-209ENST00000522243 HSP90AB3PQ58FF7 597 aa26.92■■□□□ 1.9
SDCBP-209ENST00000522243 RBM17Q96I25 401 aaKnown RBP26.92■■□□□ 1.9
SDCBP-209ENST00000522243 TCERG1O14776 1098 aaKnown RBP26.91■■□□□ 1.9
SDCBP-209ENST00000522243 HOXA10P31260 410 aaPredicted RBP26.91■■□□□ 1.9
SDCBP-209ENST00000522243 NLRP10Q86W26 655 aa26.91■■□□□ 1.9
SDCBP-209ENST00000522243 SYNE4Q8N205 404 aa26.91■■□□□ 1.9
SDCBP-209ENST00000522243 NLRP3Q96P20 1036 aa26.91■■□□□ 1.9
SDCBP-209ENST00000522243 ZNF316A6NFI3 1004 aaPredicted RBP26.9■■□□□ 1.9
SDCBP-209ENST00000522243 ELL2O00472 640 aaPredicted RBP26.9■■□□□ 1.9
SDCBP-209ENST00000522243 SLC51AQ86UW1 340 aa26.9■■□□□ 1.9
SDCBP-209ENST00000522243 SMC1BQ8NDV3 1235 aa26.9■■□□□ 1.9
SDCBP-209ENST00000522243 IFT57Q9NWB7 429 aa26.9■■□□□ 1.9
SDCBP-209ENST00000522243 DBF4Q9UBU7 674 aaPredicted RBP26.9■■□□□ 1.9
SDCBP-209ENST00000522243 GNAI1P63096 354 aa26.89■■□□□ 1.9
SDCBP-209ENST00000522243 HTRA3P83110 453 aa26.89■■□□□ 1.9
SDCBP-209ENST00000522243 SLC10A5Q5PT55 438 aa26.89■■□□□ 1.9
SDCBP-209ENST00000522243 CRAMP1Q96RY5 1269 aa26.89■■□□□ 1.9
SDCBP-209ENST00000522243 LAMB2P55268 1798 aa26.89■■□□□ 1.89
SDCBP-209ENST00000522243 CALD1Q05682 793 aaKnown RBP26.88■■□□□ 1.89
SDCBP-209ENST00000522243 PPEF1O14829 653 aaPredicted RBP26.87■■□□□ 1.89
SDCBP-209ENST00000522243 HCLS1P14317 486 aaPredicted RBP26.87■■□□□ 1.89
SDCBP-209ENST00000522243 IARSP41252 1262 aaKnown RBP26.87■■□□□ 1.89
SDCBP-209ENST00000522243 ANKRD13DQ6ZTN6 518 aa26.87■■□□□ 1.89
SDCBP-209ENST00000522243 PLBD2Q8NHP8 589 aa26.87■■□□□ 1.89
SDCBP-209ENST00000522243 TRMT112Q9UI30 125 aaKnown RBP26.87■■□□□ 1.89
SDCBP-209ENST00000522243 SNED1Q8TER0 1413 aa26.87■■□□□ 1.89
SDCBP-209ENST00000522243 CC2D2BQ6DHV5 1058 aa26.85■■□□□ 1.89
SDCBP-209ENST00000522243 HYPKQ9NX55 129 aa26.85■■□□□ 1.89
SDCBP-209ENST00000522243 ZNF541Q9H0D2 1346 aa26.85■■□□□ 1.89
SDCBP-209ENST00000522243 ATP5J2-PTCD1G3V325 749 aa26.84■■□□□ 1.89
SDCBP-209ENST00000522243 RNF123Q5XPI4 1314 aa26.84■■□□□ 1.89
SDCBP-209ENST00000522243 DNAJC5GQ8N7S2 189 aa26.83■■□□□ 1.89
SDCBP-209ENST00000522243 C8orf58Q8NAV2 365 aa26.83■■□□□ 1.89
SDCBP-209ENST00000522243 PSMD1Q99460 953 aa26.83■■□□□ 1.89
SDCBP-209ENST00000522243 SH3TC1Q8TE82 1336 aa26.83■■□□□ 1.89
SDCBP-209ENST00000522243 ANP32CO43423 234 aa26.82■■□□□ 1.88
SDCBP-209ENST00000522243 PHAXQ9H814 394 aaKnown RBP26.82■■□□□ 1.88
SDCBP-209ENST00000522243 MRS2Q9HD23 443 aa26.82■■□□□ 1.88
SDCBP-209ENST00000522243 ABCC4O15439 1325 aa26.82■■□□□ 1.88
SDCBP-209ENST00000522243 ISCA1Q9BUE6 129 aa26.81■■□□□ 1.88
SDCBP-209ENST00000522243 POTEIP0CG38 1075 aa26.8■■□□□ 1.88
SDCBP-209ENST00000522243 POTEJP0CG39 1038 aa26.8■■□□□ 1.88
SDCBP-209ENST00000522243 TAF1P21675 1872 aa26.8■■□□□ 1.88
SDCBP-209ENST00000522243 COL4A5P29400 1685 aa26.79■■□□□ 1.88
SDCBP-209ENST00000522243 DDX60Q8IY21 1712 aaKnown RBP26.79■■□□□ 1.88
SDCBP-209ENST00000522243 FZD9O00144 591 aa26.79■■□□□ 1.88
SDCBP-209ENST00000522243 RIC3Q7Z5B4 369 aa26.79■■□□□ 1.88
SDCBP-209ENST00000522243 JDP2Q8WYK2 163 aa26.79■■□□□ 1.88
SDCBP-209ENST00000522243 SCN4AP35499 1836 aa26.79■■□□□ 1.88
SDCBP-209ENST00000522243 RTL5Q5HYW3 569 aaPredicted RBP26.78■■□□□ 1.88
SDCBP-209ENST00000522243 TSPYL6Q8N831 410 aa26.78■■□□□ 1.88
SDCBP-209ENST00000522243 TSR2Q969E8 191 aaKnown RBP26.78■■□□□ 1.88
SDCBP-209ENST00000522243 FAM89AQ96GI7 184 aa26.78■■□□□ 1.88
SDCBP-209ENST00000522243 ATP6V0A2Q9Y487 856 aa26.78■■□□□ 1.88
SDCBP-209ENST00000522243 IQCA1LA6NCM1 817 aa26.77■■□□□ 1.88
SDCBP-209ENST00000522243 GRIPAP1Q4V328 841 aa26.77■■□□□ 1.88
SDCBP-209ENST00000522243 DDX46Q7L014 1031 aaKnown RBP26.77■■□□□ 1.88
SDCBP-209ENST00000522243 LARGE2Q8N3Y3 721 aa26.77■■□□□ 1.88
SDCBP-209ENST00000522243 L3MBTL3Q96JM7 780 aaPredicted RBP26.77■■□□□ 1.88
SDCBP-209ENST00000522243 TMX4Q9H1E5 349 aaPredicted RBP26.77■■□□□ 1.88
SDCBP-209ENST00000522243 GOLGA2Q08379 1002 aa26.76■■□□□ 1.87
SDCBP-209ENST00000522243 CEP350Q5VT06 3117 aa26.75■■□□□ 1.87
SDCBP-209ENST00000522243 CHADLQ6NUI6 762 aa26.75■■□□□ 1.87
SDCBP-209ENST00000522243 WWC1Q8IX03 1113 aa26.75■■□□□ 1.87
SDCBP-209ENST00000522243 TAF1DQ9H5J8 278 aaPredicted RBP26.75■■□□□ 1.87
SDCBP-209ENST00000522243 BBOX1O75936 387 aa26.74■■□□□ 1.87
SDCBP-209ENST00000522243 CCDC27Q2M243 656 aa26.74■■□□□ 1.87
SDCBP-209ENST00000522243 GJA3Q9Y6H8 435 aa26.74■■□□□ 1.87
SDCBP-209ENST00000522243 EIF6P56537 245 aaKnown RBP26.73■■□□□ 1.87
SDCBP-209ENST00000522243 GRAPQ13588 217 aa26.73■■□□□ 1.87
SDCBP-209ENST00000522243 CCDC30Q5VVM6 783 aa26.73■■□□□ 1.87
SDCBP-209ENST00000522243 SP8Q8IXZ3 490 aa26.73■■□□□ 1.87
SDCBP-209ENST00000522243 GRAPLQ8TC17 118 aaPredicted RBP26.73■■□□□ 1.87
SDCBP-209ENST00000522243 KLRG1Q96E93 195 aa26.73■■□□□ 1.87
SDCBP-209ENST00000522243 MYD88Q99836 296 aa26.73■■□□□ 1.87
SDCBP-209ENST00000522243 HACL1Q9UJ83 578 aa26.73■■□□□ 1.87
SDCBP-209ENST00000522243 SALL2Q9Y467 1007 aaPredicted RBP26.73■■□□□ 1.87
SDCBP-209ENST00000522243 PPIP5K2O43314 1243 aa26.72■■□□□ 1.87
SDCBP-209ENST00000522243 AOC3Q16853 763 aa26.72■■□□□ 1.87
SDCBP-209ENST00000522243 EAPPQ56P03 285 aaPredicted RBP26.72■■□□□ 1.87
SDCBP-209ENST00000522243 TRIM28Q13263 835 aaKnown RBP26.71■■□□□ 1.87
SDCBP-209ENST00000522243 NIM1KQ8IY84 436 aa26.71■■□□□ 1.87
SDCBP-209ENST00000522243 GPC2Q8N158 579 aa26.71■■□□□ 1.87
SDCBP-209ENST00000522243 IRS4O14654 1257 aaPredicted RBP26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms