RNA–Protein interactions for RNA: ENST00000521403.1

CERNA3-201, Transcript of competing endogenous lncRNA 3 for miR-645, humanhuman

TSL 3 BASIC

Gene CERNA3, Length 557 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA3-201ENST00000521403 TRIM35Q9UPQ4 493 aa25.82■■□□□ 1.72
CERNA3-201ENST00000521403 RIC1Q4ADV7 1423 aa25.81■■□□□ 1.72
CERNA3-201ENST00000521403 CHL1O00533 1208 aa25.81■■□□□ 1.72
CERNA3-201ENST00000521403 IARSP41252 1262 aaKnown RBP25.81■■□□□ 1.72
CERNA3-201ENST00000521403 HOXA10P31260 410 aaPredicted RBP25.8■■□□□ 1.72
CERNA3-201ENST00000521403 COPS6Q7L5N1 327 aa25.8■■□□□ 1.72
CERNA3-201ENST00000521403 XAGE3Q8WTP9 111 aa25.8■■□□□ 1.72
CERNA3-201ENST00000521403 RBM17Q96I25 401 aaKnown RBP25.8■■□□□ 1.72
CERNA3-201ENST00000521403 UTP14AQ9BVJ6 771 aaKnown RBP25.8■■□□□ 1.72
CERNA3-201ENST00000521403 PRKRIP1Q9H875 184 aaPredicted RBP25.8■■□□□ 1.72
CERNA3-201ENST00000521403 ZNF541Q9H0D2 1346 aa25.8■■□□□ 1.72
CERNA3-201ENST00000521403 IQCA1LA6NCM1 817 aa25.79■■□□□ 1.72
CERNA3-201ENST00000521403 C3orf67Q6ZVT6 689 aa25.79■■□□□ 1.72
CERNA3-201ENST00000521403 TCERG1O14776 1098 aaKnown RBP25.78■■□□□ 1.72
CERNA3-201ENST00000521403 POTEIP0CG38 1075 aa25.78■■□□□ 1.72
CERNA3-201ENST00000521403 POTEJP0CG39 1038 aa25.78■■□□□ 1.72
CERNA3-201ENST00000521403 CC2D2BQ6DHV5 1058 aa25.78■■□□□ 1.72
CERNA3-201ENST00000521403 CHADLQ6NUI6 762 aa25.78■■□□□ 1.72
CERNA3-201ENST00000521403 HSP90AB3PQ58FF7 597 aa25.77■■□□□ 1.72
CERNA3-201ENST00000521403 IFFO2Q5TF58 517 aa25.77■■□□□ 1.72
CERNA3-201ENST00000521403 L3MBTL3Q96JM7 780 aaPredicted RBP25.77■■□□□ 1.72
CERNA3-201ENST00000521403 NLRP3Q96P20 1036 aa25.77■■□□□ 1.72
CERNA3-201ENST00000521403 PSMD1Q99460 953 aa25.77■■□□□ 1.72
CERNA3-201ENST00000521403 DDX21Q9NR30 783 aaKnown RBP eCLIP25.77■■□□□ 1.72
CERNA3-201ENST00000521403 PPEF1O14829 653 aaPredicted RBP25.76■■□□□ 1.71
CERNA3-201ENST00000521403 CRAMP1Q96RY5 1269 aa25.76■■□□□ 1.71
CERNA3-201ENST00000521403 CHPF2Q9P2E5 772 aa25.76■■□□□ 1.71
CERNA3-201ENST00000521403 SNED1Q8TER0 1413 aa25.76■■□□□ 1.71
CERNA3-201ENST00000521403 HDGFL1Q5TGJ6 251 aa25.75■■□□□ 1.71
CERNA3-201ENST00000521403 JDP2Q8WYK2 163 aa25.75■■□□□ 1.71
CERNA3-201ENST00000521403 TAF1DQ9H5J8 278 aaPredicted RBP25.75■■□□□ 1.71
CERNA3-201ENST00000521403 JMYQ8N9B5 988 aa25.74■■□□□ 1.71
CERNA3-201ENST00000521403 SCN4AP35499 1836 aa25.74■■□□□ 1.71
CERNA3-201ENST00000521403 FZD9O00144 591 aa25.73■■□□□ 1.71
CERNA3-201ENST00000521403 SLC51AQ86UW1 340 aa25.73■■□□□ 1.71
CERNA3-201ENST00000521403 NLRP10Q86W26 655 aa25.73■■□□□ 1.71
CERNA3-201ENST00000521403 ANKRD36CQ5JPF3 1778 aa25.73■■□□□ 1.71
CERNA3-201ENST00000521403 TCIRG1Q13488 830 aa25.72■■□□□ 1.71
CERNA3-201ENST00000521403 GRIPAP1Q4V328 841 aa25.72■■□□□ 1.71
CERNA3-201ENST00000521403 EAPPQ56P03 285 aaPredicted RBP25.72■■□□□ 1.71
CERNA3-201ENST00000521403 SLC10A5Q5PT55 438 aa25.72■■□□□ 1.71
CERNA3-201ENST00000521403 LDHDQ86WU2 507 aa25.72■■□□□ 1.71
CERNA3-201ENST00000521403 CFAP44Q96MT7 982 aa25.72■■□□□ 1.71
CERNA3-201ENST00000521403 TMX4Q9H1E5 349 aaPredicted RBP25.72■■□□□ 1.71
CERNA3-201ENST00000521403 HACL1Q9UJ83 578 aa25.72■■□□□ 1.71
CERNA3-201ENST00000521403 RNF123Q5XPI4 1314 aa25.71■■□□□ 1.71
CERNA3-201ENST00000521403 HOXB7P09629 217 aa25.71■■□□□ 1.71
CERNA3-201ENST00000521403 HCLS1P14317 486 aaPredicted RBP25.71■■□□□ 1.71
CERNA3-201ENST00000521403 LARGE2Q8N3Y3 721 aa25.71■■□□□ 1.71
CERNA3-201ENST00000521403 ZNF428Q96B54 188 aa25.71■■□□□ 1.71
CERNA3-201ENST00000521403 TRMT112Q9UI30 125 aaKnown RBP25.71■■□□□ 1.71
CERNA3-201ENST00000521403 APAF1O14727 1248 aa25.7■■□□□ 1.7
CERNA3-201ENST00000521403 PCNTO95613 3336 aa25.7■■□□□ 1.7
CERNA3-201ENST00000521403 ABCC4O15439 1325 aa25.69■■□□□ 1.7
CERNA3-201ENST00000521403 EPHX2P34913 555 aa25.69■■□□□ 1.7
CERNA3-201ENST00000521403 EIF6P56537 245 aaKnown RBP25.69■■□□□ 1.7
CERNA3-201ENST00000521403 DUSP27Q5VZP5 1158 aa25.69■■□□□ 1.7
CERNA3-201ENST00000521403 GPC2Q8N158 579 aa25.69■■□□□ 1.7
CERNA3-201ENST00000521403 MBIPQ9NS73 344 aa25.69■■□□□ 1.7
CERNA3-201ENST00000521403 DBF4Q9UBU7 674 aaPredicted RBP25.69■■□□□ 1.7
CERNA3-201ENST00000521403 GJA3Q9Y6H8 435 aa25.69■■□□□ 1.7
CERNA3-201ENST00000521403 SH3TC1Q8TE82 1336 aa25.68■■□□□ 1.7
CERNA3-201ENST00000521403 CLEC11AQ9Y240 323 aa25.68■■□□□ 1.7
CERNA3-201ENST00000521403 ATP6V0A2Q9Y487 856 aa25.68■■□□□ 1.7
CERNA3-201ENST00000521403 COL4A5P29400 1685 aa25.68■■□□□ 1.7
CERNA3-201ENST00000521403 PLBD2Q8NHP8 589 aa25.67■■□□□ 1.7
CERNA3-201ENST00000521403 ANKRD13DQ6ZTN6 518 aa25.66■■□□□ 1.7
CERNA3-201ENST00000521403 CREBZFQ9NS37 354 aa25.66■■□□□ 1.7
CERNA3-201ENST00000521403 PPIP5K2O43314 1243 aa25.65■■□□□ 1.7
CERNA3-201ENST00000521403 NIM1KQ8IY84 436 aa25.65■■□□□ 1.7
CERNA3-201ENST00000521403 HYPKQ9NX55 129 aa25.65■■□□□ 1.7
CERNA3-201ENST00000521403 LAMB2P55268 1798 aa25.64■■□□□ 1.7
CERNA3-201ENST00000521403 CALD1Q05682 793 aaKnown RBP25.64■■□□□ 1.7
CERNA3-201ENST00000521403 DDX46Q7L014 1031 aaKnown RBP25.64■■□□□ 1.7
CERNA3-201ENST00000521403 PNMA8AQ86V59 439 aaPredicted RBP25.64■■□□□ 1.7
CERNA3-201ENST00000521403 IFT57Q9NWB7 429 aa25.64■■□□□ 1.7
CERNA3-201ENST00000521403 ATP5J2-PTCD1G3V325 749 aa25.63■■□□□ 1.69
CERNA3-201ENST00000521403 BBOX1O75936 387 aa25.63■■□□□ 1.69
CERNA3-201ENST00000521403 LMOD1P29536 600 aaPredicted RBP25.63■■□□□ 1.69
CERNA3-201ENST00000521403 AOC3Q16853 763 aa25.63■■□□□ 1.69
CERNA3-201ENST00000521403 ELL2O00472 640 aaPredicted RBP25.62■■□□□ 1.69
CERNA3-201ENST00000521403 ZNF853P0CG23 659 aa25.62■■□□□ 1.69
CERNA3-201ENST00000521403 GNAI1P63096 354 aa25.62■■□□□ 1.69
CERNA3-201ENST00000521403 MKRN1Q9UHC7 482 aaKnown RBP25.62■■□□□ 1.69
CERNA3-201ENST00000521403 PASKQ96RG2 1323 aa25.62■■□□□ 1.69
CERNA3-201ENST00000521403 DPP8Q6V1X1 898 aaPredicted RBP25.61■■□□□ 1.69
CERNA3-201ENST00000521403 SP8Q8IXZ3 490 aa25.61■■□□□ 1.69
CERNA3-201ENST00000521403 SUPT20HQ8NEM7 779 aa25.61■■□□□ 1.69
CERNA3-201ENST00000521403 ISCA1Q9BUE6 129 aa25.61■■□□□ 1.69
CERNA3-201ENST00000521403 GRAPQ13588 217 aa25.6■■□□□ 1.69
CERNA3-201ENST00000521403 MAP1SQ66K74 1059 aaPredicted RBP25.6■■□□□ 1.69
CERNA3-201ENST00000521403 GRAPLQ8TC17 118 aaPredicted RBP25.6■■□□□ 1.69
CERNA3-201ENST00000521403 FAM89AQ96GI7 184 aa25.6■■□□□ 1.69
CERNA3-201ENST00000521403 ITGBL1O95965 494 aaPredicted RBP25.59■■□□□ 1.69
CERNA3-201ENST00000521403 RTL5Q5HYW3 569 aaPredicted RBP25.59■■□□□ 1.69
CERNA3-201ENST00000521403 MPNDQ8N594 471 aa25.59■■□□□ 1.69
CERNA3-201ENST00000521403 ADAMTSL1Q8N6G6 1762 aa25.59■■□□□ 1.69
CERNA3-201ENST00000521403 HSPA1AP0DMV8 641 aaKnown RBP25.58■■□□□ 1.69
CERNA3-201ENST00000521403 HSPA1BP0DMV9 641 aaKnown RBP25.58■■□□□ 1.69
CERNA3-201ENST00000521403 SCNN1DP51172 638 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms