RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 TMC1Q8TDI8 760 aa10.32□□□□□ -0.76
CTNNA1-227ENST00000521387 CNKSR1Q969H4 720 aa10.32□□□□□ -0.76
CTNNA1-227ENST00000521387 COG3Q96JB2 828 aa10.32□□□□□ -0.76
CTNNA1-227ENST00000521387 CSRNP1Q96S65 589 aa10.32□□□□□ -0.76
CTNNA1-227ENST00000521387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.32□□□□□ -0.761e-8■□□□□ 11.3
CTNNA1-227ENST00000521387 LAMA3Q16787 3333 aa10.32□□□□□ -0.76
CTNNA1-227ENST00000521387 ERVV-2B6SEH9 535 aa10.31□□□□□ -0.76
CTNNA1-227ENST00000521387 SOGA3Q5TF21 947 aa10.31□□□□□ -0.76
CTNNA1-227ENST00000521387 STYK1Q6J9G0 422 aa10.31□□□□□ -0.76
CTNNA1-227ENST00000521387 PGAP2Q9UHJ9 254 aa10.31□□□□□ -0.76
CTNNA1-227ENST00000521387 PDZRN3Q9UPQ7 1066 aa10.31□□□□□ -0.76
CTNNA1-227ENST00000521387 GJA3Q9Y6H8 435 aa10.31□□□□□ -0.76
CTNNA1-227ENST00000521387 TJP1Q07157 1748 aa10.3□□□□□ -0.76
CTNNA1-227ENST00000521387 TONSLQ96HA7 1378 aa10.3□□□□□ -0.76
CTNNA1-227ENST00000521387 IARSP41252 1262 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-227ENST00000521387 HUNKP57058 714 aa10.3□□□□□ -0.76
CTNNA1-227ENST00000521387 CCDC93Q567U6 631 aa10.3□□□□□ -0.76
CTNNA1-227ENST00000521387 FBXO46Q6PJ61 603 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-227ENST00000521387 ZNF296Q8WUU4 475 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-227ENST00000521387 ZNF408Q9H9D4 720 aa10.3□□□□□ -0.76
CTNNA1-227ENST00000521387 SPTBN5Q9NRC6 3674 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-227ENST00000521387 H0YGN5 161 aa10.29□□□□□ -0.76
CTNNA1-227ENST00000521387 SEC24BO95487 1268 aa10.29□□□□□ -0.76
CTNNA1-227ENST00000521387 TBC1D9BQ66K14 1250 aa10.29□□□□□ -0.76
CTNNA1-227ENST00000521387 RGMBQ6NW40 437 aa10.29□□□□□ -0.76
CTNNA1-227ENST00000521387 DNAJC10Q8IXB1 793 aa10.29□□□□□ -0.76
CTNNA1-227ENST00000521387 MPNDQ8N594 471 aa10.29□□□□□ -0.76
CTNNA1-227ENST00000521387 RBM27Q9P2N5 1060 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-227ENST00000521387 SNED1Q8TER0 1413 aa10.28□□□□□ -0.76
CTNNA1-227ENST00000521387 EN2P19622 333 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-227ENST00000521387 LMOD1P29536 600 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-227ENST00000521387 HIRAP54198 1017 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-227ENST00000521387 MASTLQ96GX5 879 aa10.28□□□□□ -0.76
CTNNA1-227ENST00000521387 CYP19A1P11511 503 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-227ENST00000521387 ZBTB1Q9Y2K1 713 aa10.27□□□□□ -0.77
CTNNA1-227ENST00000521387 COL15A1P39059 1388 aa10.26□□□□□ -0.77
CTNNA1-227ENST00000521387 ARFGEF2Q9Y6D5 1785 aa10.26□□□□□ -0.77
CTNNA1-227ENST00000521387 TTLL13PA6NNM8 815 aa10.26□□□□□ -0.77
CTNNA1-227ENST00000521387 EYA1Q99502 592 aa10.26□□□□□ -0.77
CTNNA1-227ENST00000521387 PRO3102Q9H379 93 aa10.26□□□□□ -0.77
CTNNA1-227ENST00000521387 TERF2IPQ9NYB0 399 aa10.26□□□□□ -0.77
CTNNA1-227ENST00000521387 HDAC9Q9UKV0 1011 aa10.26□□□□□ -0.77
CTNNA1-227ENST00000521387 AKAP11Q9UKA4 1901 aa10.26□□□□□ -0.77
CTNNA1-227ENST00000521387 BCORQ6W2J9 1755 aa10.26□□□□□ -0.77
CTNNA1-227ENST00000521387 PAPPA2Q9BXP8 1791 aa10.25□□□□□ -0.77
CTNNA1-227ENST00000521387 ST18O60284 1047 aa10.25□□□□□ -0.77
CTNNA1-227ENST00000521387 TBC1D8O95759 1140 aa10.25□□□□□ -0.77
CTNNA1-227ENST00000521387 TIE1P35590 1138 aa10.25□□□□□ -0.77
CTNNA1-227ENST00000521387 CCDC102AQ96A19 550 aa10.25□□□□□ -0.77
CTNNA1-227ENST00000521387 PRDM6Q9NQX0 595 aa10.25□□□□□ -0.77
CTNNA1-227ENST00000521387 ADARB2Q9NS39 739 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-227ENST00000521387 GPRC5DQ9NZD1 345 aa10.25□□□□□ -0.77
CTNNA1-227ENST00000521387 FLT4P35916 1363 aa10.25□□□□□ -0.77
CTNNA1-227ENST00000521387 SOX1O00570 391 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-227ENST00000521387 FYB1O15117 783 aa10.24□□□□□ -0.77
CTNNA1-227ENST00000521387 SLC10A3P09131 477 aa10.24□□□□□ -0.77
CTNNA1-227ENST00000521387 EIF6P56537 245 aaKnown RBP10.24□□□□□ -0.77
CTNNA1-227ENST00000521387 CABP4P57796 275 aa10.24□□□□□ -0.77
CTNNA1-227ENST00000521387 RASEFQ8IZ41 740 aa10.24□□□□□ -0.77
CTNNA1-227ENST00000521387 ZNF157P51786 506 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1-227ENST00000521387 CDC37L1Q7L3B6 337 aa10.23□□□□□ -0.77
CTNNA1-227ENST00000521387 USP48Q86UV5 1035 aa10.23□□□□□ -0.77
CTNNA1-227ENST00000521387 RTKN2Q8IZC4 609 aa10.23□□□□□ -0.77
CTNNA1-227ENST00000521387 NFATC2IPQ8NCF5 419 aa10.23□□□□□ -0.77
CTNNA1-227ENST00000521387 JDP2Q8WYK2 163 aa10.23□□□□□ -0.77
CTNNA1-227ENST00000521387 GGNBP2Q9H3C7 697 aa10.23□□□□□ -0.77
CTNNA1-227ENST00000521387 GPR25O00155 361 aa10.22□□□□□ -0.77
CTNNA1-227ENST00000521387 SLC51AQ86UW1 340 aa10.22□□□□□ -0.77
CTNNA1-227ENST00000521387 TRPM4Q8TD43 1214 aa10.22□□□□□ -0.77
CTNNA1-227ENST00000521387 R3HDMLQ9H3Y0 253 aa10.22□□□□□ -0.77
CTNNA1-227ENST00000521387 EMILIN1Q9Y6C2 1016 aa10.22□□□□□ -0.77
CTNNA1-227ENST00000521387 KLRG2A4D1S0 409 aaPredicted RBP10.21□□□□□ -0.77
CTNNA1-227ENST00000521387 EIF5P55010 431 aaKnown RBP10.21□□□□□ -0.77
CTNNA1-227ENST00000521387 INTS3Q68E01 1043 aaKnown RBP10.21□□□□□ -0.77
CTNNA1-227ENST00000521387 SLAIN1Q8ND83 568 aa10.21□□□□□ -0.77
CTNNA1-227ENST00000521387 ZC3H15Q8WU90 426 aaKnown RBP10.21□□□□□ -0.77
CTNNA1-227ENST00000521387 LRCH3Q96II8 777 aa10.21□□□□□ -0.77
CTNNA1-227ENST00000521387 PSMD1Q99460 953 aa10.21□□□□□ -0.77
CTNNA1-227ENST00000521387 GBA2Q9HCG7 927 aaPredicted RBP10.21□□□□□ -0.77
CTNNA1-227ENST00000521387 RAPGEFL1Q9UHV5 662 aa10.21□□□□□ -0.77
CTNNA1-227ENST00000521387 KIF24Q5T7B8 1368 aa10.21□□□□□ -0.78
CTNNA1-227ENST00000521387 SHTN1A0MZ66 631 aa10.2□□□□□ -0.78
CTNNA1-227ENST00000521387 NOM1Q5C9Z4 860 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-227ENST00000521387 RBBP6Q7Z6E9 1792 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-227ENST00000521387 CNBD1Q8NA66 436 aa10.2□□□□□ -0.78
CTNNA1-227ENST00000521387 TTC28Q96AY4 2481 aa10.2□□□□□ -0.78
CTNNA1-227ENST00000521387 TRIM35Q9UPQ4 493 aa10.2□□□□□ -0.78
CTNNA1-227ENST00000521387 RAB3GAP2Q9H2M9 1393 aa10.19□□□□□ -0.78
CTNNA1-227ENST00000521387 NPR1P16066 1061 aa10.19□□□□□ -0.78
CTNNA1-227ENST00000521387 COL9A1P20849 921 aa10.19□□□□□ -0.78
CTNNA1-227ENST00000521387 RASAL3Q86YV0 1011 aa10.19□□□□□ -0.78
CTNNA1-227ENST00000521387 ERBB4Q15303 1308 aa10.18□□□□□ -0.78
CTNNA1-227ENST00000521387 HSP90AB1P08238 724 aaKnown RBP10.18□□□□□ -0.78
CTNNA1-227ENST00000521387 CANXP27824 592 aaKnown RBP10.18□□□□□ -0.78
CTNNA1-227ENST00000521387 GMPSP49915 693 aaPredicted RBP10.18□□□□□ -0.78
CTNNA1-227ENST00000521387 MMRN1Q13201 1228 aa10.18□□□□□ -0.78
CTNNA1-227ENST00000521387 CXCL9Q07325 125 aa10.17□□□□□ -0.78
CTNNA1-227ENST00000521387 C2orf69Q8N8R5 385 aa10.17□□□□□ -0.78
CTNNA1-227ENST00000521387 ARMC5Q96C12 935 aa10.17□□□□□ -0.78
CTNNA1-227ENST00000521387 TBC1D2BQ9UPU7 963 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms