RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 CCDC88AQ3V6T2 1871 aa13.5□□□□□ -0.25
TRAPPC9-209ENST00000521167 ATP10DQ9P241 1426 aa13.5□□□□□ -0.25
TRAPPC9-209ENST00000521167 KRT24Q2M2I5 525 aa13.5□□□□□ -0.25
TRAPPC9-209ENST00000521167 DUSP27Q5VZP5 1158 aa13.5□□□□□ -0.25
TRAPPC9-209ENST00000521167 ZNF34Q8IZ26 560 aa13.5□□□□□ -0.25
TRAPPC9-209ENST00000521167 KIF12Q96FN5 646 aa13.5□□□□□ -0.25
TRAPPC9-209ENST00000521167 KLRG2A4D1S0 409 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC9-209ENST00000521167 PROSER3Q2NL68 480 aa13.49□□□□□ -0.25
TRAPPC9-209ENST00000521167 HDGFL1Q5TGJ6 251 aa13.49□□□□□ -0.25
TRAPPC9-209ENST00000521167 STYK1Q6J9G0 422 aa13.49□□□□□ -0.25
TRAPPC9-209ENST00000521167 COPS6Q7L5N1 327 aa13.49□□□□□ -0.25
TRAPPC9-209ENST00000521167 WWC1Q8IX03 1113 aa13.49□□□□□ -0.25
TRAPPC9-209ENST00000521167 CCDC24Q8N4L8 307 aa13.49□□□□□ -0.25
TRAPPC9-209ENST00000521167 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
TRAPPC9-209ENST00000521167 ZNF622Q969S3 477 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRAPPC9-209ENST00000521167 MS4A3Q96HJ5 214 aa13.49□□□□□ -0.25
TRAPPC9-209ENST00000521167 ZBTB3Q9H5J0 574 aa13.49□□□□□ -0.25
TRAPPC9-209ENST00000521167 DBF4Q9UBU7 674 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC9-209ENST00000521167 CACNA1FO60840 1977 aa13.49□□□□□ -0.25
TRAPPC9-209ENST00000521167 COL11A2P13942 1736 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-209ENST00000521167 IL16Q14005 1332 aa13.48□□□□□ -0.25
TRAPPC9-209ENST00000521167 ANXA1P04083 346 aa13.48□□□□□ -0.25
TRAPPC9-209ENST00000521167 SRGNP10124 158 aa13.48□□□□□ -0.25
TRAPPC9-209ENST00000521167 GTF2E1P29083 439 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC9-209ENST00000521167 PARP10Q53GL7 1025 aa13.48□□□□□ -0.25
TRAPPC9-209ENST00000521167 HSP90AB3PQ58FF7 597 aa13.48□□□□□ -0.25
TRAPPC9-209ENST00000521167 XAGE3Q8WTP9 111 aa13.48□□□□□ -0.25
TRAPPC9-209ENST00000521167 CNKSR1Q969H4 720 aa13.48□□□□□ -0.25
TRAPPC9-209ENST00000521167 MASTLQ96GX5 879 aa13.48□□□□□ -0.25
TRAPPC9-209ENST00000521167 HYPKQ9NX55 129 aa13.48□□□□□ -0.25
TRAPPC9-209ENST00000521167 CACNA1SQ13698 1873 aa13.48□□□□□ -0.25
TRAPPC9-209ENST00000521167 ANKRD36CQ5JPF3 1778 aa13.48□□□□□ -0.25
TRAPPC9-209ENST00000521167 ARFGEF2Q9Y6D5 1785 aa13.48□□□□□ -0.25
TRAPPC9-209ENST00000521167 ADCY9O60503 1353 aa13.47□□□□□ -0.25
TRAPPC9-209ENST00000521167 IBTKQ9P2D0 1353 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC9-209ENST00000521167 FAM177BA6PVY3 158 aa13.47□□□□□ -0.25
TRAPPC9-209ENST00000521167 PPP1R42Q7Z4L9 355 aa13.47□□□□□ -0.25
TRAPPC9-209ENST00000521167 CHPF2Q9P2E5 772 aa13.47□□□□□ -0.25
TRAPPC9-209ENST00000521167 SLX4Q8IY92 1834 aa13.47□□□□□ -0.25
TRAPPC9-209ENST00000521167 NPR1P16066 1061 aa13.46□□□□□ -0.25
TRAPPC9-209ENST00000521167 GPTP24298 496 aa13.46□□□□□ -0.25
TRAPPC9-209ENST00000521167 AIMP1Q12904 312 aaKnown RBP13.46□□□□□ -0.25
TRAPPC9-209ENST00000521167 WDR63Q8IWG1 891 aa13.46□□□□□ -0.25
TRAPPC9-209ENST00000521167 FAM9BQ8IZU0 186 aa13.46□□□□□ -0.25
TRAPPC9-209ENST00000521167 FER1L6Q2WGJ9 1857 aa13.46□□□□□ -0.26
TRAPPC9-209ENST00000521167 TCIRG1Q13488 830 aa13.45□□□□□ -0.26
TRAPPC9-209ENST00000521167 SUSD4Q5VX71 490 aa13.45□□□□□ -0.26
TRAPPC9-209ENST00000521167 ANKRD13DQ6ZTN6 518 aa13.45□□□□□ -0.26
TRAPPC9-209ENST00000521167 C8orf58Q8NAV2 365 aa13.45□□□□□ -0.26
TRAPPC9-209ENST00000521167 PLBD2Q8NHP8 589 aa13.45□□□□□ -0.26
TRAPPC9-209ENST00000521167 DICER1Q9UPY3 1922 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-209ENST00000521167 RNF123Q5XPI4 1314 aa13.44□□□□□ -0.26
TRAPPC9-209ENST00000521167 UBN2Q6ZU65 1347 aa13.44□□□□□ -0.26
TRAPPC9-209ENST00000521167 ELL2O00472 640 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-209ENST00000521167 NTSR2O95665 410 aa13.44□□□□□ -0.26
TRAPPC9-209ENST00000521167 ALDH1B1P30837 517 aa13.44□□□□□ -0.26
TRAPPC9-209ENST00000521167 ERFEQ4G0M1 354 aa13.44□□□□□ -0.26
TRAPPC9-209ENST00000521167 SLC10A5Q5PT55 438 aa13.44□□□□□ -0.26
TRAPPC9-209ENST00000521167 SOGA3Q5TF21 947 aa13.44□□□□□ -0.26
TRAPPC9-209ENST00000521167 CCDC30Q5VVM6 783 aa13.44□□□□□ -0.26
TRAPPC9-209ENST00000521167 C9orf131Q5VYM1 1079 aa13.44□□□□□ -0.26
TRAPPC9-209ENST00000521167 UTP14AQ9BVJ6 771 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-209ENST00000521167 RIC1Q4ADV7 1423 aa13.44□□□□□ -0.26
TRAPPC9-209ENST00000521167 PRPF40BQ6NWY9 871 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-209ENST00000521167 NUTM1Q86Y26 1132 aa13.43□□□□□ -0.26
TRAPPC9-209ENST00000521167 GPBP1L1Q9HC44 474 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC9-209ENST00000521167 C21orf2O43822 256 aa13.42□□□□□ -0.26
TRAPPC9-209ENST00000521167 LMNB1P20700 586 aa13.42□□□□□ -0.26
TRAPPC9-209ENST00000521167 CRY2Q49AN0 593 aa13.42□□□□□ -0.26
TRAPPC9-209ENST00000521167 NLRP10Q86W26 655 aa13.42□□□□□ -0.26
TRAPPC9-209ENST00000521167 TSR2Q969E8 191 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-209ENST00000521167 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
TRAPPC9-209ENST00000521167 RNF181Q9P0P0 153 aa13.42□□□□□ -0.26
TRAPPC9-209ENST00000521167 ZC3H4Q9UPT8 1303 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-209ENST00000521167 SENP3-EIF4A1A0A087X0R7 540 aa13.41□□□□□ -0.26
TRAPPC9-209ENST00000521167 MAP3K13O43283 966 aa13.41□□□□□ -0.26
TRAPPC9-209ENST00000521167 HOXA10P31260 410 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-209ENST00000521167 TRIM28Q13263 835 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-209ENST00000521167 TSPYL6Q8N831 410 aa13.41□□□□□ -0.26
TRAPPC9-209ENST00000521167 C7orf43Q8WVR3 580 aa13.41□□□□□ -0.26
TRAPPC9-209ENST00000521167 NLRP3Q96P20 1036 aa13.41□□□□□ -0.26
TRAPPC9-209ENST00000521167 ABCC12Q96J65 1359 aa13.41□□□□□ -0.26
TRAPPC9-209ENST00000521167 LTBP3Q9NS15 1303 aa13.4□□□□□ -0.26
TRAPPC9-209ENST00000521167 NFKBIEO00221 500 aa13.4□□□□□ -0.26
TRAPPC9-209ENST00000521167 GOLGA2Q08379 1002 aa13.4□□□□□ -0.26
TRAPPC9-209ENST00000521167 TWISTNBQ3B726 338 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-209ENST00000521167 ASTLQ6HA08 431 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-209ENST00000521167 RIC3Q7Z5B4 369 aa13.4□□□□□ -0.26
TRAPPC9-209ENST00000521167 RBM17Q96I25 401 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-209ENST00000521167 ISCA1Q9BUE6 129 aa13.4□□□□□ -0.26
TRAPPC9-209ENST00000521167 TRMT112Q9UI30 125 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-209ENST00000521167 SALL2Q9Y467 1007 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-209ENST00000521167 TNRC6CQ9HCJ0 1690 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-209ENST00000521167 CCER2I3L3R5 266 aa13.39□□□□□ -0.27
TRAPPC9-209ENST00000521167 DDX58O95786 925 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-209ENST00000521167 RASSF7Q02833 373 aa13.39□□□□□ -0.27
TRAPPC9-209ENST00000521167 LHX8Q68G74 356 aa13.39□□□□□ -0.27
TRAPPC9-209ENST00000521167 RPGRQ92834 1020 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-209ENST00000521167 CRAMP1Q96RY5 1269 aa13.39□□□□□ -0.27
TRAPPC9-209ENST00000521167 STK31Q9BXU1 1019 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms