RNA–Protein interactions for RNA: ENST00000520952.1

CDH17-204, Transcript of cadherin 17, humanhuman

TSL 4

Gene CDH17, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-204ENST00000520952 ZNF34Q8IZ26 560 aa12.05□□□□□ -0.48
CDH17-204ENST00000520952 TNS4Q8IZW8 715 aa12.05□□□□□ -0.48
CDH17-204ENST00000520952 NYXQ9GZU5 481 aa12.05□□□□□ -0.48
CDH17-204ENST00000520952 CLEC11AQ9Y240 323 aa12.05□□□□□ -0.48
CDH17-204ENST00000520952 RNF123Q5XPI4 1314 aa12.05□□□□□ -0.48
CDH17-204ENST00000520952 PASKQ96RG2 1323 aa12.05□□□□□ -0.48
CDH17-204ENST00000520952 KDM3BQ7LBC6 1761 aa12.05□□□□□ -0.48
CDH17-204ENST00000520952 HOXA10P31260 410 aaPredicted RBP12.04□□□□□ -0.48
CDH17-204ENST00000520952 EPHX2P34913 555 aa12.04□□□□□ -0.48
CDH17-204ENST00000520952 RIPK4P57078 832 aa12.04□□□□□ -0.48
CDH17-204ENST00000520952 PDIA6Q15084 440 aa12.04□□□□□ -0.48
CDH17-204ENST00000520952 LRP10Q7Z4F1 713 aa12.04□□□□□ -0.48
CDH17-204ENST00000520952 NECTIN2Q92692 538 aa12.04□□□□□ -0.48
CDH17-204ENST00000520952 TSPYL4Q9UJ04 414 aa12.04□□□□□ -0.48
CDH17-204ENST00000520952 HACL1Q9UJ83 578 aa12.04□□□□□ -0.48
CDH17-204ENST00000520952 MAPK8IP3Q9UPT6 1336 aa12.04□□□□□ -0.48
CDH17-204ENST00000520952 SNED1Q8TER0 1413 aa12.03□□□□□ -0.48
CDH17-204ENST00000520952 LAMB4A4D0S4 1761 aa12.03□□□□□ -0.48
CDH17-204ENST00000520952 NTSR2O95665 410 aa12.03□□□□□ -0.48
CDH17-204ENST00000520952 MAP1SQ66K74 1059 aaPredicted RBP12.03□□□□□ -0.48
CDH17-204ENST00000520952 GIGYF2Q6Y7W6 1299 aaKnown RBP12.03□□□□□ -0.48
CDH17-204ENST00000520952 RPGRQ92834 1020 aaKnown RBP12.03□□□□□ -0.48
CDH17-204ENST00000520952 ZNF428Q96B54 188 aa12.03□□□□□ -0.48
CDH17-204ENST00000520952 PSMD1Q99460 953 aa12.03□□□□□ -0.48
CDH17-204ENST00000520952 GJA3Q9Y6H8 435 aa12.03□□□□□ -0.48
CDH17-204ENST00000520952 COL4A5P29400 1685 aa12.03□□□□□ -0.48
CDH17-204ENST00000520952 SCN4AP35499 1836 aa12.02□□□□□ -0.48
CDH17-204ENST00000520952 TMPOP42166 694 aaKnown RBP12.01□□□□□ -0.49
CDH17-204ENST00000520952 VEGFBP49765 207 aa12.01□□□□□ -0.49
CDH17-204ENST00000520952 FMR1Q06787 632 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDH17-204ENST00000520952 KRT24Q2M2I5 525 aa12.01□□□□□ -0.49
CDH17-204ENST00000520952 CCDC146Q8IYE0 955 aa12.01□□□□□ -0.49
CDH17-204ENST00000520952 CNTROBQ8N137 903 aa12.01□□□□□ -0.49
CDH17-204ENST00000520952 GPC2Q8N158 579 aa12.01□□□□□ -0.49
CDH17-204ENST00000520952 JDP2Q8WYK2 163 aa12.01□□□□□ -0.49
CDH17-204ENST00000520952 RBM17Q96I25 401 aaKnown RBP12.01□□□□□ -0.49
CDH17-204ENST00000520952 CRAMP1Q96RY5 1269 aa12.01□□□□□ -0.49
CDH17-204ENST00000520952 PNNQ9H307 717 aaKnown RBP12.01□□□□□ -0.49
CDH17-204ENST00000520952 CNTNAP1P78357 1384 aa12.01□□□□□ -0.49
CDH17-204ENST00000520952 TMEM88BA6NKF7 163 aa12□□□□□ -0.49
CDH17-204ENST00000520952 PPEF1O14829 653 aaPredicted RBP12□□□□□ -0.49
CDH17-204ENST00000520952 FOXN1O15353 648 aa12□□□□□ -0.49
CDH17-204ENST00000520952 EPS15P42566 896 aa12□□□□□ -0.49
CDH17-204ENST00000520952 EIF6P56537 245 aaKnown RBP12□□□□□ -0.49
CDH17-204ENST00000520952 AIMP1Q12904 312 aaKnown RBP12□□□□□ -0.49
CDH17-204ENST00000520952 NEUROD2Q15784 382 aa12□□□□□ -0.49
CDH17-204ENST00000520952 CC2D2BQ6DHV5 1058 aa12□□□□□ -0.49
CDH17-204ENST00000520952 COPS6Q7L5N1 327 aa12□□□□□ -0.49
CDH17-204ENST00000520952 PPP1R42Q7Z4L9 355 aa12□□□□□ -0.49
CDH17-204ENST00000520952 LARGE2Q8N3Y3 721 aa12□□□□□ -0.49
CDH17-204ENST00000520952 NLRP3Q96P20 1036 aa12□□□□□ -0.49
CDH17-204ENST00000520952 UTP14AQ9BVJ6 771 aaKnown RBP12□□□□□ -0.49
CDH17-204ENST00000520952 HCLS1P14317 486 aaPredicted RBP11.99□□□□□ -0.49
CDH17-204ENST00000520952 SLC10A5Q5PT55 438 aa11.99□□□□□ -0.49
CDH17-204ENST00000520952 PNMA8AQ86V59 439 aaPredicted RBP11.99□□□□□ -0.49
CDH17-204ENST00000520952 XAGE3Q8WTP9 111 aa11.99□□□□□ -0.49
CDH17-204ENST00000520952 ERBB4Q15303 1308 aa11.99□□□□□ -0.49
CDH17-204ENST00000520952 IBTKQ9P2D0 1353 aaPredicted RBP11.98□□□□□ -0.49
CDH17-204ENST00000520952 SCNN1DP51172 638 aa11.98□□□□□ -0.49
CDH17-204ENST00000520952 DDX10Q13206 875 aaKnown RBP11.98□□□□□ -0.49
CDH17-204ENST00000520952 AOC3Q16853 763 aa11.98□□□□□ -0.49
CDH17-204ENST00000520952 PARP10Q53GL7 1025 aa11.98□□□□□ -0.49
CDH17-204ENST00000520952 LAS1LQ9Y4W2 734 aaKnown RBP11.98□□□□□ -0.49
CDH17-204ENST00000520952 ADAMTSL1Q8N6G6 1762 aa11.97□□□□□ -0.49
CDH17-204ENST00000520952 LTBP1Q14766 1721 aa11.97□□□□□ -0.49
CDH17-204ENST00000520952 ABCC4O15439 1325 aa11.97□□□□□ -0.49
CDH17-204ENST00000520952 PPIP5K2O43314 1243 aa11.97□□□□□ -0.49
CDH17-204ENST00000520952 RALBP1Q15311 655 aa11.97□□□□□ -0.49
CDH17-204ENST00000520952 NLRP10Q86W26 655 aa11.97□□□□□ -0.49
CDH17-204ENST00000520952 TRIM35Q9UPQ4 493 aa11.97□□□□□ -0.49
CDH17-204ENST00000520952 ATP6V0A2Q9Y487 856 aa11.97□□□□□ -0.49
CDH17-204ENST00000520952 RIC1Q4ADV7 1423 aa11.96□□□□□ -0.49
CDH17-204ENST00000520952 TRAF5O00463 557 aa11.96□□□□□ -0.49
CDH17-204ENST00000520952 CHL1O00533 1208 aa11.96□□□□□ -0.49
CDH17-204ENST00000520952 LMOD1P29536 600 aaPredicted RBP11.96□□□□□ -0.49
CDH17-204ENST00000520952 TCIRG1Q13488 830 aa11.96□□□□□ -0.49
CDH17-204ENST00000520952 DEFB115Q30KQ5 88 aa11.96□□□□□ -0.49
CDH17-204ENST00000520952 NIM1KQ8IY84 436 aa11.96□□□□□ -0.49
CDH17-204ENST00000520952 CNKSR2Q8WXI2 1034 aa11.96□□□□□ -0.49
CDH17-204ENST00000520952 DDX21Q9NR30 783 aaKnown RBP eCLIP11.96□□□□□ -0.49
CDH17-204ENST00000520952 BABAM1Q9NWV8 329 aa11.96□□□□□ -0.49
CDH17-204ENST00000520952 CXCL9Q07325 125 aa11.95□□□□□ -0.5
CDH17-204ENST00000520952 GRIPAP1Q4V328 841 aa11.95□□□□□ -0.5
CDH17-204ENST00000520952 WBP1LQ9NX94 342 aa11.95□□□□□ -0.5
CDH17-204ENST00000520952 CHPF2Q9P2E5 772 aa11.95□□□□□ -0.5
CDH17-204ENST00000520952 TRMT112Q9UI30 125 aaKnown RBP11.95□□□□□ -0.5
CDH17-204ENST00000520952 ABT1Q9ULW3 272 aaKnown RBP11.95□□□□□ -0.5
CDH17-204ENST00000520952 TAF1P21675 1872 aa11.95□□□□□ -0.5
CDH17-204ENST00000520952 RASSF10A6NK89 507 aa11.94□□□□□ -0.5
CDH17-204ENST00000520952 BBOX1O75936 387 aa11.94□□□□□ -0.5
CDH17-204ENST00000520952 LBX1P52954 281 aa11.94□□□□□ -0.5
CDH17-204ENST00000520952 LMOD3Q0VAK6 560 aa11.94□□□□□ -0.5
CDH17-204ENST00000520952 CST9Q5W186 159 aa11.94□□□□□ -0.5
CDH17-204ENST00000520952 SP8Q8IXZ3 490 aa11.94□□□□□ -0.5
CDH17-204ENST00000520952 MPNDQ8N594 471 aa11.94□□□□□ -0.5
CDH17-204ENST00000520952 RTFDC1Q9BY42 306 aaPredicted RBP11.94□□□□□ -0.5
CDH17-204ENST00000520952 TMX4Q9H1E5 349 aaPredicted RBP11.94□□□□□ -0.5
CDH17-204ENST00000520952 ZNRF3Q9ULT6 936 aa11.94□□□□□ -0.5
CDH17-204ENST00000520952 ADAMTS8Q9UP79 889 aa11.94□□□□□ -0.5
CDH17-204ENST00000520952 WDR33Q9C0J8 1336 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms