RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 NBPF1Q3BBV0 1214 aa8.23□□□□□ -1.09
FAM49B-218ENST00000520887 NBPF8Q3BBV2 869 aa8.23□□□□□ -1.09
FAM49B-218ENST00000520887 TMEM259Q4ZIN3 620 aa8.23□□□□□ -1.09
FAM49B-218ENST00000520887 PPP1R26Q5T8A7 1209 aaPredicted RBP8.23□□□□□ -1.09
FAM49B-218ENST00000520887 ADAM32Q8TC27 787 aa8.23□□□□□ -1.09
FAM49B-218ENST00000520887 IRF7Q92985 503 aa8.23□□□□□ -1.09
FAM49B-218ENST00000520887 OCSTAMPQ9BR26 566 aa8.23□□□□□ -1.09
FAM49B-218ENST00000520887 TSEN34Q9BSV6 310 aaKnown RBP8.23□□□□□ -1.09
FAM49B-218ENST00000520887 PGPEP1Q9NXJ5 209 aa8.23□□□□□ -1.09
FAM49B-218ENST00000520887 GTF3C3Q9Y5Q9 886 aa8.23□□□□□ -1.09
FAM49B-218ENST00000520887 NPHP3Q7Z494 1330 aa8.23□□□□□ -1.09
FAM49B-218ENST00000520887 TULP4Q9NRJ4 1543 aa8.23□□□□□ -1.09
FAM49B-218ENST00000520887 SBNO2Q9Y2G9 1366 aa8.22□□□□□ -1.09
FAM49B-218ENST00000520887 ROBO1Q9Y6N7 1651 aa8.22□□□□□ -1.09
FAM49B-218ENST00000520887 H3BM21 787 aa8.22□□□□□ -1.09
FAM49B-218ENST00000520887 WASLO00401 505 aaPredicted RBP8.22□□□□□ -1.09
FAM49B-218ENST00000520887 ESCO1Q5FWF5 840 aa8.22□□□□□ -1.09
FAM49B-218ENST00000520887 HIRIP3Q9BW71 556 aaPredicted RBP8.22□□□□□ -1.09
FAM49B-218ENST00000520887 PLEKHH1Q9ULM0 1364 aa8.22□□□□□ -1.09
FAM49B-218ENST00000520887 MST1RQ04912 1400 aa8.21□□□□□ -1.09
FAM49B-218ENST00000520887 PSME1Q06323 249 aa8.21□□□□□ -1.1
FAM49B-218ENST00000520887 DHX9Q08211 1270 aaKnown RBP8.21□□□□□ -1.1
FAM49B-218ENST00000520887 NGDNQ8NEJ9 315 aaKnown RBP8.21□□□□□ -1.1
FAM49B-218ENST00000520887 PHLPP1O60346 1717 aa8.2□□□□□ -1.1
FAM49B-218ENST00000520887 C1orf167Q5SNV9 1468 aa8.2□□□□□ -1.1
FAM49B-218ENST00000520887 INTS6LQ5JSJ4 861 aaKnown RBP8.2□□□□□ -1.1
FAM49B-218ENST00000520887 NINLQ9Y2I6 1382 aa8.2□□□□□ -1.1
FAM49B-218ENST00000520887 GMPRP36959 345 aa8.19□□□□□ -1.1
FAM49B-218ENST00000520887 CBLBQ13191 982 aa8.19□□□□□ -1.1
FAM49B-218ENST00000520887 Q6ZVU0 165 aa8.19□□□□□ -1.1
FAM49B-218ENST00000520887 HDGFL2Q7Z4V5 671 aaPredicted RBP8.19□□□□□ -1.1
FAM49B-218ENST00000520887 CDK19Q9BWU1 502 aa8.19□□□□□ -1.1
FAM49B-218ENST00000520887 TRIM34Q9BYJ4 488 aa8.19□□□□□ -1.1
FAM49B-218ENST00000520887 SOS2Q07890 1332 aaPredicted RBP8.19□□□□□ -1.1
FAM49B-218ENST00000520887 AHDC1Q5TGY3 1603 aaPredicted RBP8.18□□□□□ -1.1
FAM49B-218ENST00000520887 ST20-MTHFSA0A0A6YYL1 179 aa8.18□□□□□ -1.1
FAM49B-218ENST00000520887 NBPF20Q3BBV1 942 aa8.18□□□□□ -1.1
FAM49B-218ENST00000520887 BRINP3Q76B58 766 aa8.18□□□□□ -1.1
FAM49B-218ENST00000520887 DZIP3Q86Y13 1208 aaKnown RBP8.18□□□□□ -1.1
FAM49B-218ENST00000520887 POLR3GLQ9BT43 218 aa8.18□□□□□ -1.1
FAM49B-218ENST00000520887 STK17AQ9UEE5 414 aa8.18□□□□□ -1.1
FAM49B-218ENST00000520887 TMC1Q8TDI8 760 aa8.17□□□□□ -1.1
FAM49B-218ENST00000520887 LRRC59Q96AG4 307 aaKnown RBP8.17□□□□□ -1.1
FAM49B-218ENST00000520887 NUDT16Q96DE0 195 aaKnown RBP8.17□□□□□ -1.1
FAM49B-218ENST00000520887 TERF2IPQ9NYB0 399 aa8.17□□□□□ -1.1
FAM49B-218ENST00000520887 DNMT3LQ9UJW3 386 aa8.17□□□□□ -1.1
FAM49B-218ENST00000520887 ERBB4Q15303 1308 aa8.17□□□□□ -1.1
FAM49B-218ENST00000520887 PPIP5K1Q6PFW1 1433 aa8.17□□□□□ -1.1
FAM49B-218ENST00000520887 ATP7BP35670 1465 aa8.17□□□□□ -1.1
FAM49B-218ENST00000520887 NHSL1Q5SYE7 1610 aa8.17□□□□□ -1.1
FAM49B-218ENST00000520887 TTLL8A6PVC2 850 aa8.16□□□□□ -1.1
FAM49B-218ENST00000520887 ARHGEF10O15013 1369 aa8.16□□□□□ -1.1
FAM49B-218ENST00000520887 BRD4O60885 1362 aaPredicted RBP8.16□□□□□ -1.1
FAM49B-218ENST00000520887 MEX3CQ5U5Q3 659 aaKnown RBP8.16□□□□□ -1.1
FAM49B-218ENST00000520887 PUS7Q96PZ0 661 aaKnown RBP8.16□□□□□ -1.1
FAM49B-218ENST00000520887 JCADQ9P266 1359 aa8.16□□□□□ -1.1
FAM49B-218ENST00000520887 SPINT1O43278 529 aa8.15□□□□□ -1.1
FAM49B-218ENST00000520887 FOXO3O43524 673 aa8.15□□□□□ -1.1
FAM49B-218ENST00000520887 PMFBP1Q8TBY8 1022 aa8.15□□□□□ -1.1
FAM49B-218ENST00000520887 TOPAZ1Q8N9V7 1692 aa8.14□□□□□ -1.11
FAM49B-218ENST00000520887 SPATA31A6Q5VVP1 1343 aa8.14□□□□□ -1.11
FAM49B-218ENST00000520887 PPFIA3O75145 1194 aa8.14□□□□□ -1.11
FAM49B-218ENST00000520887 HSPA5P11021 654 aaKnown RBP8.14□□□□□ -1.11
FAM49B-218ENST00000520887 HSPA1LP34931 641 aa8.14□□□□□ -1.11
FAM49B-218ENST00000520887 RAB15P59190 212 aa8.14□□□□□ -1.11
FAM49B-218ENST00000520887 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.14□□□□□ -1.11
FAM49B-218ENST00000520887 KRT28Q7Z3Y7 464 aa8.14□□□□□ -1.11
FAM49B-218ENST00000520887 ORAI2Q96SN7 254 aa8.14□□□□□ -1.11
FAM49B-218ENST00000520887 TMPRSS4Q9NRS4 437 aa8.14□□□□□ -1.11
FAM49B-218ENST00000520887 RGPD8O14715 1765 aaPredicted RBP8.14□□□□□ -1.11
FAM49B-218ENST00000520887 TNS3Q68CZ2 1445 aa8.13□□□□□ -1.11
FAM49B-218ENST00000520887 FIGNL2A6NMB9 653 aa8.13□□□□□ -1.11
FAM49B-218ENST00000520887 ZBBXA8MT70 800 aa8.13□□□□□ -1.11
FAM49B-218ENST00000520887 ESPNB1AK53 854 aa8.13□□□□□ -1.11
FAM49B-218ENST00000520887 VSIG8P0DPA2 414 aa8.13□□□□□ -1.11
FAM49B-218ENST00000520887 GJD4Q96KN9 370 aaPredicted RBP8.13□□□□□ -1.11
FAM49B-218ENST00000520887 AGBL1Q96MI9 1066 aa8.13□□□□□ -1.11
FAM49B-218ENST00000520887 COL16A1Q07092 1604 aaPredicted RBP8.13□□□□□ -1.11
FAM49B-218ENST00000520887 SBNO1A3KN83 1393 aa8.12□□□□□ -1.11
FAM49B-218ENST00000520887 KTN1Q86UP2 1357 aaKnown RBP8.12□□□□□ -1.11
FAM49B-218ENST00000520887 SHPRHQ149N8 1683 aa8.12□□□□□ -1.11
FAM49B-218ENST00000520887 ACEP12821 1306 aa8.12□□□□□ -1.11
FAM49B-218ENST00000520887 USP32Q8NFA0 1604 aa8.12□□□□□ -1.11
FAM49B-218ENST00000520887 ERVH48-1M5A8F1 160 aa8.12□□□□□ -1.11
FAM49B-218ENST00000520887 RELBQ01201 579 aa8.12□□□□□ -1.11
FAM49B-218ENST00000520887 BANK1Q8NDB2 785 aa8.12□□□□□ -1.11
FAM49B-218ENST00000520887 POLR3AO14802 1390 aaPredicted RBP8.11□□□□□ -1.11
FAM49B-218ENST00000520887 TTC21AQ8NDW8 1320 aa8.11□□□□□ -1.11
FAM49B-218ENST00000520887 PRR36Q9H6K5 1346 aa8.11□□□□□ -1.11
FAM49B-218ENST00000520887 NLRP13Q86W25 1043 aa8.11□□□□□ -1.11
FAM49B-218ENST00000520887 SEPT12Q8IYM1 358 aa8.11□□□□□ -1.11
FAM49B-218ENST00000520887 ZNF784Q8NCA9 323 aaPredicted RBP8.11□□□□□ -1.11
FAM49B-218ENST00000520887 CABP1Q9NZU7 370 aa8.11□□□□□ -1.11
FAM49B-218ENST00000520887 ANKRD36BQ8N2N9 1353 aa8.1□□□□□ -1.11
FAM49B-218ENST00000520887 FAM181BA6NEQ2 426 aa8.1□□□□□ -1.11
FAM49B-218ENST00000520887 FBXO45P0C2W1 286 aa8.1□□□□□ -1.11
FAM49B-218ENST00000520887 XPCQ01831 940 aaPredicted RBP8.1□□□□□ -1.11
FAM49B-218ENST00000520887 PTSQ03393 145 aa8.1□□□□□ -1.11
FAM49B-218ENST00000520887 ABTB2Q8N961 1025 aa8.1□□□□□ -1.11
FAM49B-218ENST00000520887 ZSCAN1Q8NBB4 408 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms