RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 ELOA3Q8NG57 546 aa8.93□□□□□ -0.98
SKP1-207ENST00000520417 STK32AQ8WU08 396 aa8.93□□□□□ -0.98
SKP1-207ENST00000520417 PNMA5Q96PV4 448 aa8.93□□□□□ -0.98
SKP1-207ENST00000520417 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.93□□□□□ -0.986e-8■■■■■ 55.9
SKP1-207ENST00000520417 SERPINA10Q9UK55 444 aa8.93□□□□□ -0.98
SKP1-207ENST00000520417 ZMIZ1Q9ULJ6 1067 aa8.93□□□□□ -0.98
SKP1-207ENST00000520417 TGFBR3LH3BV60 316 aa8.92□□□□□ -0.98
SKP1-207ENST00000520417 GNB5O14775 395 aa8.92□□□□□ -0.98
SKP1-207ENST00000520417 SUV39H2Q9H5I1 410 aa8.92□□□□□ -0.98
SKP1-207ENST00000520417 ACIN1Q9UKV3 1341 aaKnown RBP8.91□□□□□ -0.98
SKP1-207ENST00000520417 SIN3BO75182 1162 aa8.91□□□□□ -0.98
SKP1-207ENST00000520417 DGKGP49619 791 aa8.91□□□□□ -0.98
SKP1-207ENST00000520417 LINC00114Q6XXX2 140 aa8.91□□□□□ -0.98
SKP1-207ENST00000520417 C14orf37Q86TY3 774 aa8.91□□□□□ -0.98
SKP1-207ENST00000520417 QTRT2Q9H974 415 aaKnown RBP8.91□□□□□ -0.98
SKP1-207ENST00000520417 BCS1LQ9Y276 419 aa8.91□□□□□ -0.98
SKP1-207ENST00000520417 HOXB4P17483 251 aaPredicted RBP8.9□□□□□ -0.98
SKP1-207ENST00000520417 IDH3AP50213 366 aa8.9□□□□□ -0.98
SKP1-207ENST00000520417 KCNQ4P56696 695 aa8.9□□□□□ -0.98
SKP1-207ENST00000520417 FKBP5Q13451 457 aaPredicted RBP8.9□□□□□ -0.98
SKP1-207ENST00000520417 SWI5Q1ZZU3 235 aa8.9□□□□□ -0.98
SKP1-207ENST00000520417 MKNK1Q9BUB5 465 aa8.9□□□□□ -0.98
SKP1-207ENST00000520417 UBE2OQ9C0C9 1292 aaKnown RBP8.9□□□□□ -0.98
SKP1-207ENST00000520417 EPB42P16452 691 aa8.89□□□□□ -0.99
SKP1-207ENST00000520417 ADH7P40394 386 aa8.89□□□□□ -0.99
SKP1-207ENST00000520417 C11orf91Q3C1V1 193 aa8.89□□□□□ -0.99
SKP1-207ENST00000520417 PLA2G4EQ3MJ16 856 aa8.89□□□□□ -0.99
SKP1-207ENST00000520417 KRT25Q7Z3Z0 450 aa8.89□□□□□ -0.99
SKP1-207ENST00000520417 COL8A1P27658 744 aa8.88□□□□□ -0.99
SKP1-207ENST00000520417 ELOAQ14241 798 aaKnown RBP8.88□□□□□ -0.99
SKP1-207ENST00000520417 IER5Q5VY09 327 aa8.88□□□□□ -0.99
SKP1-207ENST00000520417 PBXIP1Q96AQ6 731 aa8.88□□□□□ -0.99
SKP1-207ENST00000520417 NOP53Q9NZM5 478 aaKnown RBP8.88□□□□□ -0.99
SKP1-207ENST00000520417 M0R082 166 aa8.87□□□□□ -0.99
SKP1-207ENST00000520417 MICAL2O94851 1124 aa8.87□□□□□ -0.99
SKP1-207ENST00000520417 ATG7O95352 703 aa8.87□□□□□ -0.99
SKP1-207ENST00000520417 NFKB1P19838 968 aa8.87□□□□□ -0.99
SKP1-207ENST00000520417 CCINQ13939 588 aa8.87□□□□□ -0.99
SKP1-207ENST00000520417 TMEM164Q5U3C3 297 aa8.87□□□□□ -0.99
SKP1-207ENST00000520417 ZNF417Q8TAU3 575 aa8.87□□□□□ -0.99
SKP1-207ENST00000520417 TNFRSF25Q93038 417 aa8.87□□□□□ -0.99
SKP1-207ENST00000520417 IFT43Q96FT9 208 aa8.87□□□□□ -0.99
SKP1-207ENST00000520417 ZNF587Q96SQ5 575 aaPredicted RBP8.87□□□□□ -0.99
SKP1-207ENST00000520417 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.87□□□□□ -0.99
SKP1-207ENST00000520417 ADARB2-AS1A8MUL3 147 aa8.86□□□□□ -0.99
SKP1-207ENST00000520417 ARSDP51689 593 aa8.86□□□□□ -0.99
SKP1-207ENST00000520417 SRPK2P78362 688 aaKnown RBP8.86□□□□□ -0.99
SKP1-207ENST00000520417 NAA30Q147X3 362 aaPredicted RBP8.86□□□□□ -0.99
SKP1-207ENST00000520417 CCDC82Q8N4S0 544 aa8.86□□□□□ -0.99
SKP1-207ENST00000520417 PLVAPQ9BX97 442 aa8.86□□□□□ -0.99
SKP1-207ENST00000520417 GSX2Q9BZM3 304 aa8.86□□□□□ -0.99
SKP1-207ENST00000520417 DMGDHQ9UI17 866 aaKnown RBP8.86□□□□□ -0.99
SKP1-207ENST00000520417 LRFN2Q9ULH4 789 aa8.86□□□□□ -0.99
SKP1-207ENST00000520417 USP20Q9Y2K6 914 aa8.86□□□□□ -0.99
SKP1-207ENST00000520417 KRBA1A5PL33 1030 aa8.85□□□□□ -0.99
SKP1-207ENST00000520417 MSTNO14793 375 aa8.85□□□□□ -0.99
SKP1-207ENST00000520417 IGHA1P01876 353 aa8.85□□□□□ -0.99
SKP1-207ENST00000520417 FAM69CQ0P6D2 419 aa8.85□□□□□ -0.99
SKP1-207ENST00000520417 C8orf86Q6ZUL3 223 aa8.85□□□□□ -0.99
SKP1-207ENST00000520417 ALBP02768 609 aa8.84□□□□□ -0.99
SKP1-207ENST00000520417 INPP5BP32019 993 aa8.84□□□□□ -0.99
SKP1-207ENST00000520417 COX20Q5RI15 118 aa8.84□□□□□ -0.99
SKP1-207ENST00000520417 TREML1Q86YW5 311 aa8.84□□□□□ -0.99
SKP1-207ENST00000520417 RGL4Q8IZJ4 473 aa8.84□□□□□ -0.99
SKP1-207ENST00000520417 CMTR1Q8N1G2 835 aaKnown RBP8.84□□□□□ -0.99
SKP1-207ENST00000520417 MYO19Q96H55 970 aa8.84□□□□□ -0.99
SKP1-207ENST00000520417 OCLNQ16625 522 aa8.83□□□□□ -1
SKP1-207ENST00000520417 NUDT8Q8WV74 236 aa8.83□□□□□ -1
SKP1-207ENST00000520417 TRIM11Q96F44 468 aa8.83□□□□□ -1
SKP1-207ENST00000520417 SAP130Q9H0E3 1048 aa8.83□□□□□ -1
SKP1-207ENST00000520417 SASH3O75995 380 aa8.82□□□□□ -1
SKP1-207ENST00000520417 C16orf46Q6P387 395 aa8.82□□□□□ -1
SKP1-207ENST00000520417 CAPN12Q6ZSI9 719 aa8.82□□□□□ -1
SKP1-207ENST00000520417 ALYREFQ86V81 257 aaKnown RBP8.82□□□□□ -1
SKP1-207ENST00000520417 MICALL1Q8N3F8 863 aa8.82□□□□□ -1
SKP1-207ENST00000520417 SPOCK3Q9BQ16 436 aa8.82□□□□□ -1
SKP1-207ENST00000520417 DNAJB12Q9NXW2 375 aaKnown RBP8.82□□□□□ -1
SKP1-207ENST00000520417 CXXC1Q9P0U4 656 aaPredicted RBP8.82□□□□□ -1
SKP1-207ENST00000520417 SLC6A14Q9UN76 642 aa8.82□□□□□ -1
SKP1-207ENST00000520417 STARD13Q9Y3M8 1113 aa8.82□□□□□ -1
SKP1-207ENST00000520417 RARAP10276 462 aa8.81□□□□□ -1
SKP1-207ENST00000520417 TARSP26639 723 aaKnown RBP8.81□□□□□ -1
SKP1-207ENST00000520417 MDFIQ99750 246 aa8.81□□□□□ -1
SKP1-207ENST00000520417 JPH1Q9HDC5 661 aaPredicted RBP8.81□□□□□ -1
SKP1-207ENST00000520417 RTCBQ9Y3I0 505 aaKnown RBP8.81□□□□□ -1
SKP1-207ENST00000520417 SPDYE3A6NKU9 549 aa8.8□□□□□ -1
SKP1-207ENST00000520417 FAM229AH3BQW9 127 aa8.8□□□□□ -1
SKP1-207ENST00000520417 ITGB2P05107 769 aa8.8□□□□□ -1
SKP1-207ENST00000520417 BRD2P25440 801 aaKnown RBP8.8□□□□□ -1
SKP1-207ENST00000520417 GRNP28799 593 aaKnown RBP8.8□□□□□ -1
SKP1-207ENST00000520417 MLLT1Q03111 559 aaPredicted RBP8.8□□□□□ -1
SKP1-207ENST00000520417 EFCC1Q9HA90 598 aa8.8□□□□□ -1
SKP1-207ENST00000520417 OPLAHO14841 1288 aa8.79□□□□□ -1
SKP1-207ENST00000520417 LILRB5O75023 590 aa8.79□□□□□ -1
SKP1-207ENST00000520417 CPB1P15086 417 aa8.79□□□□□ -1
SKP1-207ENST00000520417 ATP2B4P23634 1241 aa8.79□□□□□ -1
SKP1-207ENST00000520417 PRRT3Q5FWE3 981 aa8.79□□□□□ -1
SKP1-207ENST00000520417 FAM35AQ86V20 835 aa8.79□□□□□ -1
SKP1-207ENST00000520417 CLP1Q92989 425 aaKnown RBP8.79□□□□□ -1
SKP1-207ENST00000520417 C1QTNF9BB2RNN3 333 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms