RNA–Protein interactions for RNA: ENST00000520362.5

EFR3A-204, Transcript of EFR3 homolog A, humanhuman

TSL 3

Gene EFR3A, Length 477 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-204ENST00000520362 C7orf43Q8WVR3 580 aa17.78■□□□□ 0.44
EFR3A-204ENST00000520362 IFT57Q9NWB7 429 aa17.78■□□□□ 0.44
EFR3A-204ENST00000520362 TRMT112Q9UI30 125 aaKnown RBP17.78■□□□□ 0.44
EFR3A-204ENST00000520362 HOXB7P09629 217 aa17.77■□□□□ 0.44
EFR3A-204ENST00000520362 APLP1P51693 650 aa17.77■□□□□ 0.44
EFR3A-204ENST00000520362 TCIRG1Q13488 830 aa17.77■□□□□ 0.44
EFR3A-204ENST00000520362 SYNE4Q8N205 404 aa17.77■□□□□ 0.44
EFR3A-204ENST00000520362 ANKRD31Q8N7Z5 1873 aa17.77■□□□□ 0.43
EFR3A-204ENST00000520362 LAMB4A4D0S4 1761 aa17.76■□□□□ 0.43
EFR3A-204ENST00000520362 DDNO94850 711 aaPredicted RBP17.76■□□□□ 0.43
EFR3A-204ENST00000520362 HCLS1P14317 486 aaPredicted RBP17.76■□□□□ 0.43
EFR3A-204ENST00000520362 FSTL1Q12841 308 aa17.76■□□□□ 0.43
EFR3A-204ENST00000520362 CRY2Q49AN0 593 aa17.76■□□□□ 0.43
EFR3A-204ENST00000520362 ANKRD13DQ6ZTN6 518 aa17.76■□□□□ 0.43
EFR3A-204ENST00000520362 NLRP10Q86W26 655 aa17.76■□□□□ 0.43
EFR3A-204ENST00000520362 SMC1BQ8NDV3 1235 aa17.76■□□□□ 0.43
EFR3A-204ENST00000520362 HYPKQ9NX55 129 aa17.76■□□□□ 0.43
EFR3A-204ENST00000520362 PPEF1O14829 653 aaPredicted RBP17.75■□□□□ 0.43
EFR3A-204ENST00000520362 C3orf67Q6ZVT6 689 aa17.75■□□□□ 0.43
EFR3A-204ENST00000520362 PLBD2Q8NHP8 589 aa17.75■□□□□ 0.43
EFR3A-204ENST00000520362 SALL2Q9Y467 1007 aaPredicted RBP17.75■□□□□ 0.43
EFR3A-204ENST00000520362 ATP5J2-PTCD1G3V325 749 aa17.74■□□□□ 0.43
EFR3A-204ENST00000520362 GOLGA2Q08379 1002 aa17.74■□□□□ 0.43
EFR3A-204ENST00000520362 CC2D2BQ6DHV5 1058 aa17.74■□□□□ 0.43
EFR3A-204ENST00000520362 RIC3Q7Z5B4 369 aa17.74■□□□□ 0.43
EFR3A-204ENST00000520362 JDP2Q8WYK2 163 aa17.74■□□□□ 0.43
EFR3A-204ENST00000520362 CRAMP1Q96RY5 1269 aa17.74■□□□□ 0.43
EFR3A-204ENST00000520362 IBTKQ9P2D0 1353 aaPredicted RBP17.74■□□□□ 0.43
EFR3A-204ENST00000520362 COL11A2P13942 1736 aaPredicted RBP17.73■□□□□ 0.43
EFR3A-204ENST00000520362 ZNF853P0CG23 659 aa17.73■□□□□ 0.43
EFR3A-204ENST00000520362 HOXA10P31260 410 aaPredicted RBP17.73■□□□□ 0.43
EFR3A-204ENST00000520362 IARSP41252 1262 aaKnown RBP17.73■□□□□ 0.43
EFR3A-204ENST00000520362 DLEC1Q9Y238 1755 aa17.73■□□□□ 0.43
EFR3A-204ENST00000520362 SH3TC1Q8TE82 1336 aa17.72■□□□□ 0.43
EFR3A-204ENST00000520362 SLX4Q8IY92 1834 aa17.72■□□□□ 0.43
EFR3A-204ENST00000520362 RTL5Q5HYW3 569 aaPredicted RBP17.72■□□□□ 0.43
EFR3A-204ENST00000520362 SLC10A5Q5PT55 438 aa17.72■□□□□ 0.43
EFR3A-204ENST00000520362 DDX46Q7L014 1031 aaKnown RBP17.72■□□□□ 0.43
EFR3A-204ENST00000520362 C8orf58Q8NAV2 365 aa17.71■□□□□ 0.43
EFR3A-204ENST00000520362 CHMP4AQ9BY43 222 aa17.71■□□□□ 0.43
EFR3A-204ENST00000520362 RNF123Q5XPI4 1314 aa17.71■□□□□ 0.42
EFR3A-204ENST00000520362 HTRA3P83110 453 aa17.7■□□□□ 0.42
EFR3A-204ENST00000520362 CCDC30Q5VVM6 783 aa17.7■□□□□ 0.42
EFR3A-204ENST00000520362 LARGE2Q8N3Y3 721 aa17.7■□□□□ 0.42
EFR3A-204ENST00000520362 TSR2Q969E8 191 aaKnown RBP17.7■□□□□ 0.42
EFR3A-204ENST00000520362 PHAXQ9H814 394 aaKnown RBP17.7■□□□□ 0.42
EFR3A-204ENST00000520362 GJA3Q9Y6H8 435 aa17.7■□□□□ 0.42
EFR3A-204ENST00000520362 IQCA1LA6NCM1 817 aa17.69■□□□□ 0.42
EFR3A-204ENST00000520362 EIF6P56537 245 aaKnown RBP17.69■□□□□ 0.42
EFR3A-204ENST00000520362 GRIPAP1Q4V328 841 aa17.69■□□□□ 0.42
EFR3A-204ENST00000520362 FAM89AQ96GI7 184 aa17.69■□□□□ 0.42
EFR3A-204ENST00000520362 PSMD1Q99460 953 aa17.69■□□□□ 0.42
EFR3A-204ENST00000520362 POTECB2RU33 542 aa17.68■□□□□ 0.42
EFR3A-204ENST00000520362 BBOX1O75936 387 aa17.68■□□□□ 0.42
EFR3A-204ENST00000520362 DDX58O95786 925 aaKnown RBP17.68■□□□□ 0.42
EFR3A-204ENST00000520362 EAPPQ56P03 285 aaPredicted RBP17.68■□□□□ 0.42
EFR3A-204ENST00000520362 FAM9BQ8IZU0 186 aa17.68■□□□□ 0.42
EFR3A-204ENST00000520362 MYD88Q99836 296 aa17.68■□□□□ 0.42
EFR3A-204ENST00000520362 STK31Q9BXU1 1019 aa17.68■□□□□ 0.42
EFR3A-204ENST00000520362 CLEC11AQ9Y240 323 aa17.68■□□□□ 0.42
EFR3A-204ENST00000520362 ABCC4O15439 1325 aa17.68■□□□□ 0.42
EFR3A-204ENST00000520362 ZNF541Q9H0D2 1346 aa17.68■□□□□ 0.42
EFR3A-204ENST00000520362 SBF1O95248 1867 aa17.67■□□□□ 0.42
EFR3A-204ENST00000520362 RIC1Q4ADV7 1423 aa17.67■□□□□ 0.42
EFR3A-204ENST00000520362 SLC51AQ86UW1 340 aa17.67■□□□□ 0.42
EFR3A-204ENST00000520362 WWC1Q8IX03 1113 aa17.67■□□□□ 0.42
EFR3A-204ENST00000520362 NIM1KQ8IY84 436 aa17.67■□□□□ 0.42
EFR3A-204ENST00000520362 ISCA1Q9BUE6 129 aa17.67■□□□□ 0.42
EFR3A-204ENST00000520362 ATP6V0A2Q9Y487 856 aa17.67■□□□□ 0.42
EFR3A-204ENST00000520362 NUP98P52948 1817 aa17.66■□□□□ 0.42
EFR3A-204ENST00000520362 PPIP5K2O43314 1243 aa17.66■□□□□ 0.42
EFR3A-204ENST00000520362 DPP8Q6V1X1 898 aaPredicted RBP17.66■□□□□ 0.42
EFR3A-204ENST00000520362 TSPYL6Q8N831 410 aa17.66■□□□□ 0.42
EFR3A-204ENST00000520362 HACL1Q9UJ83 578 aa17.66■□□□□ 0.42
EFR3A-204ENST00000520362 IRS4O14654 1257 aaPredicted RBP17.65■□□□□ 0.42
EFR3A-204ENST00000520362 GRAPQ13588 217 aa17.65■□□□□ 0.42
EFR3A-204ENST00000520362 CHADLQ6NUI6 762 aa17.65■□□□□ 0.42
EFR3A-204ENST00000520362 MPNDQ8N594 471 aa17.65■□□□□ 0.42
EFR3A-204ENST00000520362 SUPT20HQ8NEM7 779 aa17.65■□□□□ 0.42
EFR3A-204ENST00000520362 GRAPLQ8TC17 118 aaPredicted RBP17.65■□□□□ 0.42
EFR3A-204ENST00000520362 TNRC6CQ9HCJ0 1690 aaKnown RBP17.64■□□□□ 0.42
EFR3A-204ENST00000520362 LMOD1P29536 600 aaPredicted RBP17.64■□□□□ 0.41
EFR3A-204ENST00000520362 AOC3Q16853 763 aa17.64■□□□□ 0.41
EFR3A-204ENST00000520362 CCDC27Q2M243 656 aa17.64■□□□□ 0.41
EFR3A-204ENST00000520362 SP8Q8IXZ3 490 aa17.64■□□□□ 0.41
EFR3A-204ENST00000520362 TAF1DQ9H5J8 278 aaPredicted RBP17.64■□□□□ 0.41
EFR3A-204ENST00000520362 FZD9O00144 591 aa17.63■□□□□ 0.41
EFR3A-204ENST00000520362 POTEIP0CG38 1075 aa17.63■□□□□ 0.41
EFR3A-204ENST00000520362 POTEJP0CG39 1038 aa17.63■□□□□ 0.41
EFR3A-204ENST00000520362 HSP90B1P14625 803 aaKnown RBP17.63■□□□□ 0.41
EFR3A-204ENST00000520362 TWISTNBQ3B726 338 aaPredicted RBP17.63■□□□□ 0.41
EFR3A-204ENST00000520362 JARID2Q92833 1246 aaPredicted RBP17.63■□□□□ 0.41
EFR3A-204ENST00000520362 CACNA1SQ13698 1873 aa17.63■□□□□ 0.41
EFR3A-204ENST00000520362 EPHX2P34913 555 aa17.62■□□□□ 0.41
EFR3A-204ENST00000520362 TRIM28Q13263 835 aaKnown RBP17.62■□□□□ 0.41
EFR3A-204ENST00000520362 GPC2Q8N158 579 aa17.62■□□□□ 0.41
EFR3A-204ENST00000520362 L3MBTL3Q96JM7 780 aaPredicted RBP17.62■□□□□ 0.41
EFR3A-204ENST00000520362 CWC25Q9NXE8 425 aaPredicted RBP17.62■□□□□ 0.41
EFR3A-204ENST00000520362 MAP3K2Q9Y2U5 619 aa17.62■□□□□ 0.41
EFR3A-204ENST00000520362 FER1L6Q2WGJ9 1857 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms