RNA–Protein interactions for RNA: ENST00000520047.1

RUNX1T1-222, Transcript of RUNX1 translocation partner 1, human

TSL 2

Gene RUNX1T1, Length 1,872 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-222	ENST00000520047	SRCAP	Q6ZRS2	3230 aa		7.92	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	RNMT	O43148	476 aa	Known RBP	7.92	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	PRKAR2B	P31323	418 aa		7.92	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	RFC4	P35249	363 aa		7.92	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	LAPTM4A	Q15012	233 aa		7.92	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	RALBP1	Q15311	655 aa		7.92	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	GLIPR1L2	Q4G1C9	344 aa		7.92	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	MSL1	Q68DK7	614 aa		7.92	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	EXOC6	Q8TAG9	804 aa		7.92	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	SHANK3	Q9BYB0	1731 aa		7.92	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	GPR162	Q16538	588 aa		7.92	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	RC3H1	Q5TC82	1133 aa	Known RBP	7.92	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	HS6ST3	Q8IZP7	471 aa		7.92	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	LINC00116	Q8NCU8	138 aa		7.92	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	PNISR	Q8TF01	805 aa	Known RBP	7.92	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	LGR6	Q9HBX8	967 aa		7.92	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	ITPK1	Q13572	414 aa		7.91	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	PPP1R15B	Q5SWA1	713 aa		7.91	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	NLGN1	Q8N2Q7	840 aa		7.91	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	STARD3NL	O95772	234 aa		7.9	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	MAP3K5	Q99683	1374 aa		7.9	□□□□□ -1.14
RUNX1T1-222	ENST00000520047	MAPK8IP3	Q9UPT6	1336 aa		7.9	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	KDM6A	O15550	1401 aa	Predicted RBP	7.9	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	RPS6KA4	O75676	772 aa		7.89	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	SPRYD3	Q8NCJ5	442 aa		7.89	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	TEX13A	Q9BXU3	409 aa	Predicted RBP	7.89	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	RCAN3	Q9UKA8	241 aa		7.89	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	CNTNAP4	Q9C0A0	1308 aa		7.89	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	LY75	O60449	1722 aa		7.89	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	ZPR1	O75312	459 aa		7.89	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	ITGBL1	O95965	494 aa	Predicted RBP	7.89	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	YY1	P25490	414 aa		7.89	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	CRKL	P46109	303 aa	Known RBP	7.89	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	SLC39A6	Q13433	755 aa		7.89	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	RABGEF1	Q9UJ41	708 aa		7.89	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	CD2AP	Q9Y5K6	639 aa		7.89	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	PAPPA	Q13219	1627 aa		7.89	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	CASZ1	Q86V15	1759 aa		7.88	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	ITGB4	P16144	1822 aa		7.88	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	BTBD11	A6QL63	1104 aa		7.88	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	HTATSF1	O43719	755 aa	Known RBP	7.88	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	ARHGEF1	Q92888	912 aa	Known RBP	7.88	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	PHACTR3	Q96KR7	559 aa		7.88	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	GRIN3B	O60391	1043 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	EVI5	O60447	810 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	WDR43	Q15061	677 aa	Known RBP eCLIP	7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	ZNF790	Q6PG37	636 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	LAPTM4B	Q86VI4	370 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	IL17RE	Q8NFR9	667 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	FMNL2	Q96PY5	1086 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	SLC4A9	Q96Q91	983 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	CCDC87	Q9NVE4	849 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	PARP3	Q9Y6F1	533 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	C5	P01031	1676 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	PPP1R3G	B7ZBB8	358 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	MMP10	P09238	476 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	MAP3K9	P80192	1104 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	KCNC4	Q03721	635 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	SMIM5	Q71RC9	77 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	DNAJC10	Q8IXB1	793 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	C4B	P0C0L5	1744 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	TOGARAM1	Q9Y4F4	1720 aa		7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	MYBBP1A	Q9BQG0	1328 aa	Known RBP	7.87	□□□□□ -1.15
RUNX1T1-222	ENST00000520047		A0A087WZG4	1122 aa		7.86	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	ZNF330	Q9Y3S2	320 aa	Predicted RBP	7.86	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	COL3A1	P02461	1466 aa	Predicted RBP	7.86	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	CYP19A1	P11511	503 aa	Predicted RBP	7.85	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	CANX	P27824	592 aa	Known RBP	7.85	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	TAF7	Q15545	349 aa	Predicted RBP	7.85	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	MCM10	Q7L590	875 aa		7.85	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	NPHP1	O15259	732 aa		7.85	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	FRAT2	O75474	233 aa	Predicted RBP	7.85	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	SLC4A3	P48751	1232 aa		7.85	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	LMOD3	Q0VAK6	560 aa		7.85	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	INTS5	Q6P9B9	1019 aa	Known RBP	7.85	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	AMIGO3	Q86WK7	504 aa		7.85	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	ZNF496	Q96IT1	587 aa	Predicted RBP	7.85	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	ADAM33	Q9BZ11	813 aa		7.85	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	CRISPLD2	Q9H0B8	497 aa		7.85	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	QSER1	Q2KHR3	1735 aa		7.84	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	SNRPA1	P09661	255 aa	Known RBP	7.84	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	GYS1	P13807	737 aa		7.84	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	NFE2L2	Q16236	605 aa		7.84	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	L1TD1	Q5T7N2	865 aa	Known RBP	7.84	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	NLGN2	Q8NFZ4	835 aa		7.84	□□□□□ -1.15
RUNX1T1-222	ENST00000520047	TGFB2	P61812	414 aa		7.83	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	DCTN1	Q14203	1278 aa		7.83	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	FBXW7	Q969H0	707 aa		7.83	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	HEG1	Q9ULI3	1381 aa		7.83	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	SOWAHB	A6NEL2	793 aa		7.83	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	RIPK4	P57078	832 aa		7.83	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	FAM161A	Q3B820	660 aa		7.83	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	USPL1	Q5W0Q7	1092 aa		7.83	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	SRP68	Q9UHB9	627 aa	Known RBP	7.83	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	NARF	Q9UHQ1	456 aa		7.83	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	ZBTB1	Q9Y2K1	713 aa		7.83	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	USP42	Q9H9J4	1324 aa	Known RBP	7.83	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	CEMIP	Q8WUJ3	1361 aa		7.83	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	TAF1L	Q8IZX4	1826 aa		7.82	□□□□□ -1.16
RUNX1T1-222	ENST00000520047	SCN11A	Q9UI33	1791 aa		7.82	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms