RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 TRPM7Q96QT4 1865 aa11.61□□□□□ -0.55
TRIM35-202ENST00000519219 TCERG1O14776 1098 aaKnown RBP11.61□□□□□ -0.55
TRIM35-202ENST00000519219 RGL2O15211 777 aa11.61□□□□□ -0.55
TRIM35-202ENST00000519219 GTF2E1P29083 439 aaPredicted RBP11.61□□□□□ -0.55
TRIM35-202ENST00000519219 RTKN2Q8IZC4 609 aa11.61□□□□□ -0.55
TRIM35-202ENST00000519219 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
TRIM35-202ENST00000519219 ANKRD36CQ5JPF3 1778 aa11.61□□□□□ -0.55
TRIM35-202ENST00000519219 RIC1Q4ADV7 1423 aa11.6□□□□□ -0.55
TRIM35-202ENST00000519219 TMEM88BA6NKF7 163 aa11.6□□□□□ -0.55
TRIM35-202ENST00000519219 NTSR2O95665 410 aa11.6□□□□□ -0.55
TRIM35-202ENST00000519219 ERVV-1B6SEH8 477 aa11.59□□□□□ -0.55
TRIM35-202ENST00000519219 ANXA1P04083 346 aa11.59□□□□□ -0.55
TRIM35-202ENST00000519219 ALDH1B1P30837 517 aa11.59□□□□□ -0.55
TRIM35-202ENST00000519219 NFE2L2Q16236 605 aa11.59□□□□□ -0.55
TRIM35-202ENST00000519219 PROSER3Q2NL68 480 aa11.59□□□□□ -0.55
TRIM35-202ENST00000519219 LRP10Q7Z4F1 713 aa11.59□□□□□ -0.55
TRIM35-202ENST00000519219 CNTROBQ8N137 903 aa11.59□□□□□ -0.55
TRIM35-202ENST00000519219 PSMD1Q99460 953 aa11.59□□□□□ -0.55
TRIM35-202ENST00000519219 GJA3Q9Y6H8 435 aa11.59□□□□□ -0.55
TRIM35-202ENST00000519219 IBTKQ9P2D0 1353 aaPredicted RBP11.58□□□□□ -0.56
TRIM35-202ENST00000519219 HOXA10P31260 410 aaPredicted RBP11.58□□□□□ -0.56
TRIM35-202ENST00000519219 EPS15P42566 896 aa11.58□□□□□ -0.56
TRIM35-202ENST00000519219 SCNN1DP51172 638 aa11.58□□□□□ -0.56
TRIM35-202ENST00000519219 PDIA6Q15084 440 aa11.58□□□□□ -0.56
TRIM35-202ENST00000519219 KIF6Q6ZMV9 814 aa11.58□□□□□ -0.56
TRIM35-202ENST00000519219 ZNF34Q8IZ26 560 aa11.58□□□□□ -0.56
TRIM35-202ENST00000519219 GPC2Q8N158 579 aa11.58□□□□□ -0.56
TRIM35-202ENST00000519219 RPGRQ92834 1020 aaKnown RBP11.58□□□□□ -0.56
TRIM35-202ENST00000519219 NYXQ9GZU5 481 aa11.58□□□□□ -0.56
TRIM35-202ENST00000519219 THSD7BQ9C0I4 1608 aa11.57□□□□□ -0.56
TRIM35-202ENST00000519219 COL4A1P02462 1669 aa11.57□□□□□ -0.56
TRIM35-202ENST00000519219 PPEF1O14829 653 aaPredicted RBP11.57□□□□□ -0.56
TRIM35-202ENST00000519219 PNISRQ8TF01 805 aaKnown RBP11.57□□□□□ -0.56
TRIM35-202ENST00000519219 ZNF428Q96B54 188 aa11.57□□□□□ -0.56
TRIM35-202ENST00000519219 RASSF10A6NK89 507 aa11.56□□□□□ -0.56
TRIM35-202ENST00000519219 TRAF5O00463 557 aa11.56□□□□□ -0.56
TRIM35-202ENST00000519219 LBX1P52954 281 aa11.56□□□□□ -0.56
TRIM35-202ENST00000519219 AOC3Q16853 763 aa11.56□□□□□ -0.56
TRIM35-202ENST00000519219 GIGYF2Q6Y7W6 1299 aaKnown RBP11.56□□□□□ -0.56
TRIM35-202ENST00000519219 LARGE2Q8N3Y3 721 aa11.56□□□□□ -0.56
TRIM35-202ENST00000519219 JDP2Q8WYK2 163 aa11.56□□□□□ -0.56
TRIM35-202ENST00000519219 NECTIN2Q92692 538 aa11.56□□□□□ -0.56
TRIM35-202ENST00000519219 WBP1LQ9NX94 342 aa11.56□□□□□ -0.56
TRIM35-202ENST00000519219 DDX60Q8IY21 1712 aaKnown RBP11.55□□□□□ -0.56
TRIM35-202ENST00000519219 HSPA8P11142 646 aaKnown RBP11.55□□□□□ -0.56
TRIM35-202ENST00000519219 EIF2S2P20042 333 aaKnown RBP11.55□□□□□ -0.56
TRIM35-202ENST00000519219 EIF6P56537 245 aaKnown RBP11.55□□□□□ -0.56
TRIM35-202ENST00000519219 KRT24Q2M2I5 525 aa11.55□□□□□ -0.56
TRIM35-202ENST00000519219 PNMA8AQ86V59 439 aaPredicted RBP11.55□□□□□ -0.56
TRIM35-202ENST00000519219 CRAMP1Q96RY5 1269 aa11.55□□□□□ -0.56
TRIM35-202ENST00000519219 ABCC4O15439 1325 aa11.55□□□□□ -0.56
TRIM35-202ENST00000519219 DUOX1Q9NRD9 1551 aa11.54□□□□□ -0.56
TRIM35-202ENST00000519219 POLR2AP24928 1970 aaKnown RBP11.54□□□□□ -0.56
TRIM35-202ENST00000519219 CTCFP49711 727 aaPredicted RBP11.54□□□□□ -0.56
TRIM35-202ENST00000519219 DEFB115Q30KQ5 88 aa11.54□□□□□ -0.56
TRIM35-202ENST00000519219 CC2D2BQ6DHV5 1058 aa11.54□□□□□ -0.56
TRIM35-202ENST00000519219 RBM17Q96I25 401 aaKnown RBP11.54□□□□□ -0.56
TRIM35-202ENST00000519219 PRDM10Q9NQV6 1147 aa11.54□□□□□ -0.56
TRIM35-202ENST00000519219 DDX21Q9NR30 783 aaKnown RBP eCLIP11.54□□□□□ -0.56
TRIM35-202ENST00000519219 TSPYL4Q9UJ04 414 aa11.54□□□□□ -0.56
TRIM35-202ENST00000519219 ABT1Q9ULW3 272 aaKnown RBP11.54□□□□□ -0.56
TRIM35-202ENST00000519219 WDR33Q9C0J8 1336 aaKnown RBP11.54□□□□□ -0.56
TRIM35-202ENST00000519219 LRRC37AA6NMS7 1700 aa11.53□□□□□ -0.56
TRIM35-202ENST00000519219 PPIP5K2O43314 1243 aa11.53□□□□□ -0.56
TRIM35-202ENST00000519219 NEFMP07197 916 aa11.53□□□□□ -0.56
TRIM35-202ENST00000519219 HCLS1P14317 486 aaPredicted RBP11.53□□□□□ -0.56
TRIM35-202ENST00000519219 CST9Q5W186 159 aa11.53□□□□□ -0.56
TRIM35-202ENST00000519219 NIM1KQ8IY84 436 aa11.53□□□□□ -0.56
TRIM35-202ENST00000519219 AIDAQ96BJ3 306 aa11.53□□□□□ -0.56
TRIM35-202ENST00000519219 ERBB4Q15303 1308 aa11.53□□□□□ -0.56
TRIM35-202ENST00000519219 MAPK8IP3Q9UPT6 1336 aa11.53□□□□□ -0.56
TRIM35-202ENST00000519219 SHTN1A0MZ66 631 aa11.52□□□□□ -0.57
TRIM35-202ENST00000519219 LMOD1P29536 600 aaPredicted RBP11.52□□□□□ -0.57
TRIM35-202ENST00000519219 RIPK4P57078 832 aa11.52□□□□□ -0.57
TRIM35-202ENST00000519219 AIMP1Q12904 312 aaKnown RBP11.52□□□□□ -0.57
TRIM35-202ENST00000519219 GRM1Q13255 1194 aa11.52□□□□□ -0.57
TRIM35-202ENST00000519219 CYP4F22Q6NT55 531 aa11.52□□□□□ -0.57
TRIM35-202ENST00000519219 PPP1R42Q7Z4L9 355 aa11.52□□□□□ -0.57
TRIM35-202ENST00000519219 UTP14AQ9BVJ6 771 aaKnown RBP11.52□□□□□ -0.57
TRIM35-202ENST00000519219 ATP6V0A2Q9Y487 856 aa11.52□□□□□ -0.57
TRIM35-202ENST00000519219 CASP8AP2Q9UKL3 1982 aa11.52□□□□□ -0.57
TRIM35-202ENST00000519219 GMPSP49915 693 aaPredicted RBP11.51□□□□□ -0.57
TRIM35-202ENST00000519219 CXCL9Q07325 125 aa11.51□□□□□ -0.57
TRIM35-202ENST00000519219 PARP10Q53GL7 1025 aa11.51□□□□□ -0.57
TRIM35-202ENST00000519219 SLC10A5Q5PT55 438 aa11.51□□□□□ -0.57
TRIM35-202ENST00000519219 COPS6Q7L5N1 327 aa11.51□□□□□ -0.57
TRIM35-202ENST00000519219 NLRP10Q86W26 655 aa11.51□□□□□ -0.57
TRIM35-202ENST00000519219 XAGE3Q8WTP9 111 aa11.51□□□□□ -0.57
TRIM35-202ENST00000519219 CAPNS2Q96L46 248 aa11.51□□□□□ -0.57
TRIM35-202ENST00000519219 NLRP3Q96P20 1036 aa11.51□□□□□ -0.57
TRIM35-202ENST00000519219 GPRC5DQ9NZD1 345 aa11.51□□□□□ -0.57
TRIM35-202ENST00000519219 TSKSQ9UJT2 592 aa11.51□□□□□ -0.57
TRIM35-202ENST00000519219 AOC2O75106 756 aa11.5□□□□□ -0.57
TRIM35-202ENST00000519219 TMPOP42166 694 aaKnown RBP11.5□□□□□ -0.57
TRIM35-202ENST00000519219 HIRAP54198 1017 aaPredicted RBP11.5□□□□□ -0.57
TRIM35-202ENST00000519219 DLK2Q6UY11 383 aa11.5□□□□□ -0.57
TRIM35-202ENST00000519219 PAXIP1Q6ZW49 1069 aaPredicted RBP11.5□□□□□ -0.57
TRIM35-202ENST00000519219 CCDC146Q8IYE0 955 aa11.5□□□□□ -0.57
TRIM35-202ENST00000519219 TRPM4Q8TD43 1214 aa11.5□□□□□ -0.57
TRIM35-202ENST00000519219 RTFDC1Q9BY42 306 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms