RNA–Protein interactions for RNA: ENST00000519138.1

MCM4-206, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-206ENST00000519138 CFAP44Q96MT7 982 aa16.35■□□□□ 0.21
MCM4-206ENST00000519138 DDX21Q9NR30 783 aaKnown RBP eCLIP16.35■□□□□ 0.21
MCM4-206ENST00000519138 DDX60Q8IY21 1712 aaKnown RBP16.34■□□□□ 0.21
MCM4-206ENST00000519138 WDR90Q96KV7 1748 aa16.34■□□□□ 0.21
MCM4-206ENST00000519138 POTECB2RU33 542 aa16.34■□□□□ 0.21
MCM4-206ENST00000519138 ZNF853P0CG23 659 aa16.34■□□□□ 0.21
MCM4-206ENST00000519138 HCLS1P14317 486 aaPredicted RBP16.34■□□□□ 0.21
MCM4-206ENST00000519138 DDNO94850 711 aaPredicted RBP16.33■□□□□ 0.2
MCM4-206ENST00000519138 CRY2Q49AN0 593 aa16.33■□□□□ 0.2
MCM4-206ENST00000519138 RPGRQ92834 1020 aaKnown RBP16.33■□□□□ 0.2
MCM4-206ENST00000519138 UTP14AQ9BVJ6 771 aaKnown RBP16.33■□□□□ 0.2
MCM4-206ENST00000519138 LTBP3Q9NS15 1303 aa16.33■□□□□ 0.2
MCM4-206ENST00000519138 COL4A5P29400 1685 aa16.33■□□□□ 0.2
MCM4-206ENST00000519138 ATP5J2-PTCD1G3V325 749 aa16.32■□□□□ 0.2
MCM4-206ENST00000519138 FKBP4Q02790 459 aaKnown RBP eCLIP16.32■□□□□ 0.2
MCM4-206ENST00000519138 PPP1R42Q7Z4L9 355 aa16.32■□□□□ 0.2
MCM4-206ENST00000519138 NLRP10Q86W26 655 aa16.32■□□□□ 0.2
MCM4-206ENST00000519138 C8orf58Q8NAV2 365 aa16.32■□□□□ 0.2
MCM4-206ENST00000519138 RBM46Q8TBY0 533 aaKnown RBP16.32■□□□□ 0.2
MCM4-206ENST00000519138 TSR2Q969E8 191 aaKnown RBP16.32■□□□□ 0.2
MCM4-206ENST00000519138 IBTKQ9P2D0 1353 aaPredicted RBP16.32■□□□□ 0.2
MCM4-206ENST00000519138 SALL2Q9Y467 1007 aaPredicted RBP16.32■□□□□ 0.2
MCM4-206ENST00000519138 COL4A1P02462 1669 aa16.31■□□□□ 0.2
MCM4-206ENST00000519138 SNED1Q8TER0 1413 aa16.31■□□□□ 0.2
MCM4-206ENST00000519138 ZNF541Q9H0D2 1346 aa16.31■□□□□ 0.2
MCM4-206ENST00000519138 ZC3H4Q9UPT8 1303 aaKnown RBP16.31■□□□□ 0.2
MCM4-206ENST00000519138 ALDH1B1P30837 517 aa16.31■□□□□ 0.2
MCM4-206ENST00000519138 TCIRG1Q13488 830 aa16.31■□□□□ 0.2
MCM4-206ENST00000519138 RTL5Q5HYW3 569 aaPredicted RBP16.31■□□□□ 0.2
MCM4-206ENST00000519138 TSPYL6Q8N831 410 aa16.31■□□□□ 0.2
MCM4-206ENST00000519138 PHAXQ9H814 394 aaKnown RBP16.31■□□□□ 0.2
MCM4-206ENST00000519138 MRS2Q9HD23 443 aa16.31■□□□□ 0.2
MCM4-206ENST00000519138 IFT57Q9NWB7 429 aa16.31■□□□□ 0.2
MCM4-206ENST00000519138 POTEIP0CG38 1075 aa16.3■□□□□ 0.2
MCM4-206ENST00000519138 POTEJP0CG39 1038 aa16.3■□□□□ 0.2
MCM4-206ENST00000519138 PARP10Q53GL7 1025 aa16.3■□□□□ 0.2
MCM4-206ENST00000519138 SOGA3Q5TF21 947 aa16.3■□□□□ 0.2
MCM4-206ENST00000519138 RIC1Q4ADV7 1423 aa16.29■□□□□ 0.2
MCM4-206ENST00000519138 PPEF1O14829 653 aaPredicted RBP16.29■□□□□ 0.2
MCM4-206ENST00000519138 VEGFAP15692 232 aaPredicted RBP16.29■□□□□ 0.2
MCM4-206ENST00000519138 RBM17Q96I25 401 aaKnown RBP16.29■□□□□ 0.2
MCM4-206ENST00000519138 TRMT112Q9UI30 125 aaKnown RBP16.29■□□□□ 0.2
MCM4-206ENST00000519138 ABCC4O15439 1325 aa16.28■□□□□ 0.2
MCM4-206ENST00000519138 ANP32CO43423 234 aa16.28■□□□□ 0.2
MCM4-206ENST00000519138 HOXA10P31260 410 aaPredicted RBP16.28■□□□□ 0.2
MCM4-206ENST00000519138 IARSP41252 1262 aaKnown RBP16.28■□□□□ 0.2
MCM4-206ENST00000519138 GNAI1P63096 354 aa16.28■□□□□ 0.2
MCM4-206ENST00000519138 DPY19L2Q6NUT2 758 aa16.28■□□□□ 0.2
MCM4-206ENST00000519138 ANKRD13DQ6ZTN6 518 aa16.28■□□□□ 0.2
MCM4-206ENST00000519138 PLBD2Q8NHP8 589 aa16.28■□□□□ 0.2
MCM4-206ENST00000519138 JARID2Q92833 1246 aaPredicted RBP16.28■□□□□ 0.2
MCM4-206ENST00000519138 NLRP3Q96P20 1036 aa16.28■□□□□ 0.2
MCM4-206ENST00000519138 DBF4Q9UBU7 674 aaPredicted RBP16.28■□□□□ 0.2
MCM4-206ENST00000519138 HOXB7P09629 217 aa16.27■□□□□ 0.2
MCM4-206ENST00000519138 APLP1P51693 650 aa16.27■□□□□ 0.2
MCM4-206ENST00000519138 HSP90AB3PQ58FF7 597 aa16.27■□□□□ 0.2
MCM4-206ENST00000519138 SLC10A5Q5PT55 438 aa16.27■□□□□ 0.2
MCM4-206ENST00000519138 RTKN2Q8IZC4 609 aa16.27■□□□□ 0.2
MCM4-206ENST00000519138 FAM89AQ96GI7 184 aa16.27■□□□□ 0.2
MCM4-206ENST00000519138 CRAMP1Q96RY5 1269 aa16.26■□□□□ 0.19
MCM4-206ENST00000519138 ISCA1Q9BUE6 129 aa16.26■□□□□ 0.19
MCM4-206ENST00000519138 HYPKQ9NX55 129 aa16.26■□□□□ 0.19
MCM4-206ENST00000519138 SCN4AP35499 1836 aa16.25■□□□□ 0.19
MCM4-206ENST00000519138 FSTL1Q12841 308 aa16.25■□□□□ 0.19
MCM4-206ENST00000519138 WWC1Q8IX03 1113 aa16.25■□□□□ 0.19
MCM4-206ENST00000519138 SMC1BQ8NDV3 1235 aa16.25■□□□□ 0.19
MCM4-206ENST00000519138 LTBP1Q14766 1721 aa16.25■□□□□ 0.19
MCM4-206ENST00000519138 SH3TC1Q8TE82 1336 aa16.24■□□□□ 0.19
MCM4-206ENST00000519138 CALD1Q05682 793 aaKnown RBP16.24■□□□□ 0.19
MCM4-206ENST00000519138 RIC3Q7Z5B4 369 aa16.24■□□□□ 0.19
MCM4-206ENST00000519138 DNAJC5GQ8N7S2 189 aa16.24■□□□□ 0.19
MCM4-206ENST00000519138 MYD88Q99836 296 aa16.24■□□□□ 0.19
MCM4-206ENST00000519138 AOC3Q16853 763 aa16.23■□□□□ 0.19
MCM4-206ENST00000519138 PSMD1Q99460 953 aa16.23■□□□□ 0.19
MCM4-206ENST00000519138 GJA3Q9Y6H8 435 aa16.23■□□□□ 0.19
MCM4-206ENST00000519138 RNF123Q5XPI4 1314 aa16.22■□□□□ 0.19
MCM4-206ENST00000519138 SPEF2Q9C093 1822 aa16.22■□□□□ 0.19
MCM4-206ENST00000519138 FZD9O00144 591 aa16.22■□□□□ 0.19
MCM4-206ENST00000519138 G2E3Q7L622 706 aa16.22■□□□□ 0.19
MCM4-206ENST00000519138 FAM9BQ8IZU0 186 aa16.22■□□□□ 0.19
MCM4-206ENST00000519138 LARGE2Q8N3Y3 721 aa16.22■□□□□ 0.19
MCM4-206ENST00000519138 ATP6V0A2Q9Y487 856 aa16.22■□□□□ 0.19
MCM4-206ENST00000519138 GOLGA2Q08379 1002 aa16.21■□□□□ 0.19
MCM4-206ENST00000519138 EAPPQ56P03 285 aaPredicted RBP16.21■□□□□ 0.19
MCM4-206ENST00000519138 DDX46Q7L014 1031 aaKnown RBP16.21■□□□□ 0.19
MCM4-206ENST00000519138 CELF1Q92879 486 aaKnown RBP16.21■□□□□ 0.19
MCM4-206ENST00000519138 TAF1DQ9H5J8 278 aaPredicted RBP16.21■□□□□ 0.19
MCM4-206ENST00000519138 LRRC37AA6NMS7 1700 aa16.2■□□□□ 0.18
MCM4-206ENST00000519138 PPIP5K2O43314 1243 aa16.2■□□□□ 0.18
MCM4-206ENST00000519138 CCDC85AQ96PX6 553 aaPredicted RBP16.2■□□□□ 0.18
MCM4-206ENST00000519138 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
MCM4-206ENST00000519138 DUOX1Q9NRD9 1551 aa16.2■□□□□ 0.18
MCM4-206ENST00000519138 IRS4O14654 1257 aaPredicted RBP16.19■□□□□ 0.18
MCM4-206ENST00000519138 GRAPQ13588 217 aa16.19■□□□□ 0.18
MCM4-206ENST00000519138 CCDC30Q5VVM6 783 aa16.19■□□□□ 0.18
MCM4-206ENST00000519138 CC2D2BQ6DHV5 1058 aa16.19■□□□□ 0.18
MCM4-206ENST00000519138 GRAPLQ8TC17 118 aaPredicted RBP16.19■□□□□ 0.18
MCM4-206ENST00000519138 JDP2Q8WYK2 163 aa16.19■□□□□ 0.18
MCM4-206ENST00000519138 L3MBTL3Q96JM7 780 aaPredicted RBP16.19■□□□□ 0.18
MCM4-206ENST00000519138 GPR101Q96P66 508 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms