RNA–Protein interactions for RNA: ENST00000519112.5

BRD9-217, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 861 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-217ENST00000519112 CCDC93Q567U6 631 aa18.16■□□□□ 0.5
BRD9-217ENST00000519112 SLC51AQ86UW1 340 aa18.16■□□□□ 0.5
BRD9-217ENST00000519112 HOXB7P09629 217 aa18.15■□□□□ 0.5
BRD9-217ENST00000519112 HOXA10P31260 410 aaPredicted RBP18.15■□□□□ 0.5
BRD9-217ENST00000519112 PARP10Q53GL7 1025 aa18.15■□□□□ 0.5
BRD9-217ENST00000519112 HDGFL1Q5TGJ6 251 aa18.15■□□□□ 0.5
BRD9-217ENST00000519112 ZNF316A6NFI3 1004 aaPredicted RBP18.14■□□□□ 0.49
BRD9-217ENST00000519112 FKBP4Q02790 459 aaKnown RBP eCLIP18.14■□□□□ 0.49
BRD9-217ENST00000519112 DUSP27Q5VZP5 1158 aa18.14■□□□□ 0.49
BRD9-217ENST00000519112 PPP1R42Q7Z4L9 355 aa18.14■□□□□ 0.49
BRD9-217ENST00000519112 C16orf71Q8IYS4 520 aaPredicted RBP18.14■□□□□ 0.49
BRD9-217ENST00000519112 VEGFAP15692 232 aaPredicted RBP18.13■□□□□ 0.49
BRD9-217ENST00000519112 TCIRG1Q13488 830 aa18.13■□□□□ 0.49
BRD9-217ENST00000519112 SLC10A5Q5PT55 438 aa18.13■□□□□ 0.49
BRD9-217ENST00000519112 NLRP10Q86W26 655 aa18.13■□□□□ 0.49
BRD9-217ENST00000519112 SYNE4Q8N205 404 aa18.13■□□□□ 0.49
BRD9-217ENST00000519112 UTP14AQ9BVJ6 771 aaKnown RBP18.13■□□□□ 0.49
BRD9-217ENST00000519112 ZNF277Q9NRM2 450 aaPredicted RBP18.13■□□□□ 0.49
BRD9-217ENST00000519112 IFT57Q9NWB7 429 aa18.13■□□□□ 0.49
BRD9-217ENST00000519112 TAF1P21675 1872 aa18.12■□□□□ 0.49
BRD9-217ENST00000519112 DDNO94850 711 aaPredicted RBP18.12■□□□□ 0.49
BRD9-217ENST00000519112 DPY19L2Q6NUT2 758 aa18.12■□□□□ 0.49
BRD9-217ENST00000519112 RPGRQ92834 1020 aaKnown RBP18.12■□□□□ 0.49
BRD9-217ENST00000519112 ZNF428Q96B54 188 aa18.12■□□□□ 0.49
BRD9-217ENST00000519112 DBF4Q9UBU7 674 aaPredicted RBP18.12■□□□□ 0.49
BRD9-217ENST00000519112 ELL2O00472 640 aaPredicted RBP18.11■□□□□ 0.49
BRD9-217ENST00000519112 GNAI1P63096 354 aa18.11■□□□□ 0.49
BRD9-217ENST00000519112 FSTL1Q12841 308 aa18.11■□□□□ 0.49
BRD9-217ENST00000519112 HSP90AB3PQ58FF7 597 aa18.11■□□□□ 0.49
BRD9-217ENST00000519112 RTKN2Q8IZC4 609 aa18.11■□□□□ 0.49
BRD9-217ENST00000519112 CRAMP1Q96RY5 1269 aa18.11■□□□□ 0.49
BRD9-217ENST00000519112 DDX60Q8IY21 1712 aaKnown RBP18.11■□□□□ 0.49
BRD9-217ENST00000519112 COL4A5P29400 1685 aa18.1■□□□□ 0.49
BRD9-217ENST00000519112 APLP1P51693 650 aa18.1■□□□□ 0.49
BRD9-217ENST00000519112 ANKRD13DQ6ZTN6 518 aa18.1■□□□□ 0.49
BRD9-217ENST00000519112 C8orf58Q8NAV2 365 aa18.1■□□□□ 0.49
BRD9-217ENST00000519112 NLRP3Q96P20 1036 aa18.1■□□□□ 0.49
BRD9-217ENST00000519112 PCNTO95613 3336 aa18.1■□□□□ 0.49
BRD9-217ENST00000519112 HTRA3P83110 453 aa18.09■□□□□ 0.49
BRD9-217ENST00000519112 DNAJC5GQ8N7S2 189 aa18.09■□□□□ 0.49
BRD9-217ENST00000519112 PLBD2Q8NHP8 589 aa18.09■□□□□ 0.49
BRD9-217ENST00000519112 RBM17Q96I25 401 aaKnown RBP18.09■□□□□ 0.49
BRD9-217ENST00000519112 RNF123Q5XPI4 1314 aa18.08■□□□□ 0.49
BRD9-217ENST00000519112 ZNF541Q9H0D2 1346 aa18.08■□□□□ 0.49
BRD9-217ENST00000519112 TCERG1O14776 1098 aaKnown RBP18.08■□□□□ 0.48
BRD9-217ENST00000519112 HCLS1P14317 486 aaPredicted RBP18.08■□□□□ 0.48
BRD9-217ENST00000519112 IARSP41252 1262 aaKnown RBP18.08■□□□□ 0.48
BRD9-217ENST00000519112 PSMD1Q99460 953 aa18.08■□□□□ 0.48
BRD9-217ENST00000519112 ISCA1Q9BUE6 129 aa18.08■□□□□ 0.48
BRD9-217ENST00000519112 PHAXQ9H814 394 aaKnown RBP18.08■□□□□ 0.48
BRD9-217ENST00000519112 HYPKQ9NX55 129 aa18.08■□□□□ 0.48
BRD9-217ENST00000519112 TRMT112Q9UI30 125 aaKnown RBP18.08■□□□□ 0.48
BRD9-217ENST00000519112 SCN4AP35499 1836 aa18.07■□□□□ 0.48
BRD9-217ENST00000519112 ABCC4O15439 1325 aa18.07■□□□□ 0.48
BRD9-217ENST00000519112 PPEF1O14829 653 aaPredicted RBP18.07■□□□□ 0.48
BRD9-217ENST00000519112 CALD1Q05682 793 aaKnown RBP18.07■□□□□ 0.48
BRD9-217ENST00000519112 SMC1BQ8NDV3 1235 aa18.07■□□□□ 0.48
BRD9-217ENST00000519112 ATP5J2-PTCD1G3V325 749 aa18.06■□□□□ 0.48
BRD9-217ENST00000519112 POTEIP0CG38 1075 aa18.06■□□□□ 0.48
BRD9-217ENST00000519112 POTEJP0CG39 1038 aa18.06■□□□□ 0.48
BRD9-217ENST00000519112 CC2D2BQ6DHV5 1058 aa18.06■□□□□ 0.48
BRD9-217ENST00000519112 TSPYL6Q8N831 410 aa18.06■□□□□ 0.48
BRD9-217ENST00000519112 SH3TC1Q8TE82 1336 aa18.05■□□□□ 0.48
BRD9-217ENST00000519112 FZD9O00144 591 aa18.05■□□□□ 0.48
BRD9-217ENST00000519112 CCDC27Q2M243 656 aa18.05■□□□□ 0.48
BRD9-217ENST00000519112 WWC1Q8IX03 1113 aa18.05■□□□□ 0.48
BRD9-217ENST00000519112 TSR2Q969E8 191 aaKnown RBP18.05■□□□□ 0.48
BRD9-217ENST00000519112 MRS2Q9HD23 443 aa18.05■□□□□ 0.48
BRD9-217ENST00000519112 COL4A1P02462 1669 aa18.05■□□□□ 0.48
BRD9-217ENST00000519112 ANP32CO43423 234 aa18.04■□□□□ 0.48
BRD9-217ENST00000519112 FAM89AQ96GI7 184 aa18.04■□□□□ 0.48
BRD9-217ENST00000519112 L3MBTL3Q96JM7 780 aaPredicted RBP18.04■□□□□ 0.48
BRD9-217ENST00000519112 ATP6V0A2Q9Y487 856 aa18.04■□□□□ 0.48
BRD9-217ENST00000519112 TRIM28Q13263 835 aaKnown RBP18.01■□□□□ 0.47
BRD9-217ENST00000519112 GRIPAP1Q4V328 841 aa18.01■□□□□ 0.47
BRD9-217ENST00000519112 RTL5Q5HYW3 569 aaPredicted RBP18.01■□□□□ 0.47
BRD9-217ENST00000519112 RIC3Q7Z5B4 369 aa18.01■□□□□ 0.47
BRD9-217ENST00000519112 TAF1DQ9H5J8 278 aaPredicted RBP18.01■□□□□ 0.47
BRD9-217ENST00000519112 LRRC37AA6NMS7 1700 aa18.01■□□□□ 0.47
BRD9-217ENST00000519112 LTBP1Q14766 1721 aa18.01■□□□□ 0.47
BRD9-217ENST00000519112 ADAMTSL1Q8N6G6 1762 aa18■□□□□ 0.47
BRD9-217ENST00000519112 BBOX1O75936 387 aa18■□□□□ 0.47
BRD9-217ENST00000519112 GRAPQ13588 217 aa18■□□□□ 0.47
BRD9-217ENST00000519112 SP8Q8IXZ3 490 aa18■□□□□ 0.47
BRD9-217ENST00000519112 GRAPLQ8TC17 118 aaPredicted RBP18■□□□□ 0.47
BRD9-217ENST00000519112 IQCA1LA6NCM1 817 aa17.99■□□□□ 0.47
BRD9-217ENST00000519112 GOLGA2Q08379 1002 aa17.99■□□□□ 0.47
BRD9-217ENST00000519112 SF3B3Q15393 1217 aaKnown RBP17.99■□□□□ 0.47
BRD9-217ENST00000519112 NCBP3Q53F19 620 aaKnown RBP17.99■□□□□ 0.47
BRD9-217ENST00000519112 CCDC30Q5VVM6 783 aa17.99■□□□□ 0.47
BRD9-217ENST00000519112 DDX46Q7L014 1031 aaKnown RBP17.99■□□□□ 0.47
BRD9-217ENST00000519112 LARGE2Q8N3Y3 721 aa17.99■□□□□ 0.47
BRD9-217ENST00000519112 JDP2Q8WYK2 163 aa17.99■□□□□ 0.47
BRD9-217ENST00000519112 MYD88Q99836 296 aa17.99■□□□□ 0.47
BRD9-217ENST00000519112 RTFDC1Q9BY42 306 aaPredicted RBP17.99■□□□□ 0.47
BRD9-217ENST00000519112 AOC3Q16853 763 aa17.98■□□□□ 0.47
BRD9-217ENST00000519112 CHADLQ6NUI6 762 aa17.98■□□□□ 0.47
BRD9-217ENST00000519112 GPC2Q8N158 579 aa17.98■□□□□ 0.47
BRD9-217ENST00000519112 CELF1Q92879 486 aaKnown RBP17.98■□□□□ 0.47
BRD9-217ENST00000519112 SALL2Q9Y467 1007 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms