RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 CFAP53Q96M91 514 aa16.5■□□□□ 0.23
TRAPPC9-204ENST00000518723 RIC1Q4ADV7 1423 aa16.5■□□□□ 0.23
TRAPPC9-204ENST00000518723 ERVV-1B6SEH8 477 aa16.49■□□□□ 0.23
TRAPPC9-204ENST00000518723 LTBP1Q14766 1721 aa16.49■□□□□ 0.23
TRAPPC9-204ENST00000518723 FAM161AQ3B820 660 aa16.49■□□□□ 0.23
TRAPPC9-204ENST00000518723 NUDCQ9Y266 331 aa16.49■□□□□ 0.23
TRAPPC9-204ENST00000518723 GJA3Q9Y6H8 435 aa16.49■□□□□ 0.23
TRAPPC9-204ENST00000518723 IBTKQ9P2D0 1353 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC9-204ENST00000518723 EPS15P42566 896 aa16.48■□□□□ 0.23
TRAPPC9-204ENST00000518723 USP50Q70EL3 339 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC9-204ENST00000518723 RGS19P49795 217 aa16.47■□□□□ 0.23
TRAPPC9-204ENST00000518723 TAF7Q15545 349 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC9-204ENST00000518723 CST9Q5W186 159 aa16.47■□□□□ 0.23
TRAPPC9-204ENST00000518723 NUTM1Q86Y26 1132 aa16.47■□□□□ 0.23
TRAPPC9-204ENST00000518723 LARGE2Q8N3Y3 721 aa16.47■□□□□ 0.23
TRAPPC9-204ENST00000518723 GPR101Q96P66 508 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC9-204ENST00000518723 BEGAINQ9BUH8 593 aa16.47■□□□□ 0.23
TRAPPC9-204ENST00000518723 TLL2Q9Y6L7 1015 aa16.47■□□□□ 0.23
TRAPPC9-204ENST00000518723 FMR1Q06787 632 aaKnown RBP eCLIP16.46■□□□□ 0.23
TRAPPC9-204ENST00000518723 CNGB1Q14028 1251 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC9-204ENST00000518723 DCTN1Q14203 1278 aa16.46■□□□□ 0.23
TRAPPC9-204ENST00000518723 CYP4F22Q6NT55 531 aa16.46■□□□□ 0.23
TRAPPC9-204ENST00000518723 RPGRQ92834 1020 aaKnown RBP16.46■□□□□ 0.23
TRAPPC9-204ENST00000518723 CRAMP1Q96RY5 1269 aa16.46■□□□□ 0.23
TRAPPC9-204ENST00000518723 MAP3K15Q6ZN16 1313 aa16.45■□□□□ 0.22
TRAPPC9-204ENST00000518723 U2AF1L5P0DN76 240 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC9-204ENST00000518723 MAP2K2P36507 400 aa16.45■□□□□ 0.22
TRAPPC9-204ENST00000518723 U2AF1Q01081 240 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRAPPC9-204ENST00000518723 TRAF5O00463 557 aa16.44■□□□□ 0.22
TRAPPC9-204ENST00000518723 PAXIP1Q6ZW49 1069 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC9-204ENST00000518723 NIM1KQ8IY84 436 aa16.44■□□□□ 0.22
TRAPPC9-204ENST00000518723 CCER1Q8TC90 406 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC9-204ENST00000518723 RBM17Q96I25 401 aaKnown RBP16.44■□□□□ 0.22
TRAPPC9-204ENST00000518723 VPS33BQ9H267 617 aa16.44■□□□□ 0.22
TRAPPC9-204ENST00000518723 UBN2Q6ZU65 1347 aa16.44■□□□□ 0.22
TRAPPC9-204ENST00000518723 LAMB4A4D0S4 1761 aa16.43■□□□□ 0.22
TRAPPC9-204ENST00000518723 CCDC85CA6NKD9 419 aa16.43■□□□□ 0.22
TRAPPC9-204ENST00000518723 PPEF1O14829 653 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC9-204ENST00000518723 MLLT1Q03111 559 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC9-204ENST00000518723 KIF6Q6ZMV9 814 aa16.43■□□□□ 0.22
TRAPPC9-204ENST00000518723 ADARB2Q9NS39 739 aaKnown RBP16.43■□□□□ 0.22
TRAPPC9-204ENST00000518723 GPRC5DQ9NZD1 345 aa16.43■□□□□ 0.22
TRAPPC9-204ENST00000518723 CA12O43570 354 aa16.42■□□□□ 0.22
TRAPPC9-204ENST00000518723 SUSD4Q5VX71 490 aa16.42■□□□□ 0.22
TRAPPC9-204ENST00000518723 TTLL7Q6ZT98 887 aa16.42■□□□□ 0.22
TRAPPC9-204ENST00000518723 PNISRQ8TF01 805 aaKnown RBP16.42■□□□□ 0.22
TRAPPC9-204ENST00000518723 HHIPL1Q96JK4 782 aa16.42■□□□□ 0.22
TRAPPC9-204ENST00000518723 PPIP5K2O43314 1243 aa16.41■□□□□ 0.22
TRAPPC9-204ENST00000518723 NTSR2O95665 410 aa16.41■□□□□ 0.22
TRAPPC9-204ENST00000518723 GPTP24298 496 aa16.41■□□□□ 0.22
TRAPPC9-204ENST00000518723 GRM1Q13255 1194 aa16.41■□□□□ 0.22
TRAPPC9-204ENST00000518723 SAPCD2Q86UD0 394 aa16.41■□□□□ 0.22
TRAPPC9-204ENST00000518723 SLC51AQ86UW1 340 aa16.41■□□□□ 0.22
TRAPPC9-204ENST00000518723 ZNF34Q8IZ26 560 aa16.41■□□□□ 0.22
TRAPPC9-204ENST00000518723 NGEFQ8N5V2 710 aa16.41■□□□□ 0.22
TRAPPC9-204ENST00000518723 MIS18AQ9NYP9 233 aa16.41■□□□□ 0.22
TRAPPC9-204ENST00000518723 TRPM7Q96QT4 1865 aa16.4■□□□□ 0.22
TRAPPC9-204ENST00000518723 AOC2O75106 756 aa16.4■□□□□ 0.22
TRAPPC9-204ENST00000518723 AOC3Q16853 763 aa16.4■□□□□ 0.22
TRAPPC9-204ENST00000518723 PGAP2Q9UHJ9 254 aa16.4■□□□□ 0.22
TRAPPC9-204ENST00000518723 RRP7AQ9Y3A4 280 aaKnown RBP16.4■□□□□ 0.22
TRAPPC9-204ENST00000518723 ATP6V0A2Q9Y487 856 aa16.4■□□□□ 0.22
TRAPPC9-204ENST00000518723 CDHR2Q9BYE9 1310 aa16.4■□□□□ 0.22
TRAPPC9-204ENST00000518723 NUP98P52948 1817 aa16.4■□□□□ 0.22
TRAPPC9-204ENST00000518723 PPP2R1AP30153 589 aa16.39■□□□□ 0.21
TRAPPC9-204ENST00000518723 BRPF1P55201 1214 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC9-204ENST00000518723 EIF4A1P60842 406 aaKnown RBP16.39■□□□□ 0.21
TRAPPC9-204ENST00000518723 CXCL9Q07325 125 aa16.39■□□□□ 0.21
TRAPPC9-204ENST00000518723 GIGYF2Q6Y7W6 1299 aaKnown RBP16.39■□□□□ 0.21
TRAPPC9-204ENST00000518723 C3orf67Q6ZVT6 689 aa16.39■□□□□ 0.21
TRAPPC9-204ENST00000518723 RTFDC1Q9BY42 306 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC9-204ENST00000518723 TMX4Q9H1E5 349 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC9-204ENST00000518723 ZBTB3Q9H5J0 574 aa16.39■□□□□ 0.21
TRAPPC9-204ENST00000518723 ZNRF3Q9ULT6 936 aa16.39■□□□□ 0.21
TRAPPC9-204ENST00000518723 ERBB4Q15303 1308 aa16.39■□□□□ 0.21
TRAPPC9-204ENST00000518723 TCERG1O14776 1098 aaKnown RBP16.38■□□□□ 0.21
TRAPPC9-204ENST00000518723 CELF2O95319 508 aaKnown RBP16.38■□□□□ 0.21
TRAPPC9-204ENST00000518723 PARP10Q53GL7 1025 aa16.38■□□□□ 0.21
TRAPPC9-204ENST00000518723 PPP1R42Q7Z4L9 355 aa16.38■□□□□ 0.21
TRAPPC9-204ENST00000518723 SUPT20HQ8NEM7 779 aa16.38■□□□□ 0.21
TRAPPC9-204ENST00000518723 ZC3H15Q8WU90 426 aaKnown RBP16.38■□□□□ 0.21
TRAPPC9-204ENST00000518723 NLRP3Q96P20 1036 aa16.38■□□□□ 0.21
TRAPPC9-204ENST00000518723 TSKSQ9UJT2 592 aa16.38■□□□□ 0.21
TRAPPC9-204ENST00000518723 KDM3BQ7LBC6 1761 aa16.37■□□□□ 0.21
TRAPPC9-204ENST00000518723 MYL6BP14649 208 aa16.37■□□□□ 0.21
TRAPPC9-204ENST00000518723 GMPSP49915 693 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC9-204ENST00000518723 SLC10A5Q5PT55 438 aa16.37■□□□□ 0.21
TRAPPC9-204ENST00000518723 MCOLN1Q9GZU1 580 aa16.37■□□□□ 0.21
TRAPPC9-204ENST00000518723 GLIS2Q9BZE0 524 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC9-204ENST00000518723 KIAA2012Q0VF49 1180 aa16.35■□□□□ 0.21
TRAPPC9-204ENST00000518723 CIAPIN1Q6FI81 312 aa16.35■□□□□ 0.21
TRAPPC9-204ENST00000518723 PCDH10Q9P2E7 1040 aa16.35■□□□□ 0.21
TRAPPC9-204ENST00000518723 ABCC4O15439 1325 aa16.35■□□□□ 0.21
TRAPPC9-204ENST00000518723 BBOX1O75936 387 aa16.34■□□□□ 0.21
TRAPPC9-204ENST00000518723 HIRAP54198 1017 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC9-204ENST00000518723 TNIP1Q15025 636 aa16.34■□□□□ 0.21
TRAPPC9-204ENST00000518723 DPP8Q6V1X1 898 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC9-204ENST00000518723 CDC37L1Q7L3B6 337 aa16.34■□□□□ 0.21
TRAPPC9-204ENST00000518723 LRP10Q7Z4F1 713 aa16.34■□□□□ 0.21
TRAPPC9-204ENST00000518723 SP8Q8IXZ3 490 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms