RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 NEURL1BA8MQ27 555 aa29.05■■■□□ 2.24
NKX6-3-201ENST00000518699 SUSD4Q5VX71 490 aa29.05■■■□□ 2.24
NKX6-3-201ENST00000518699 CNBD1Q8NA66 436 aa29.05■■■□□ 2.24
NKX6-3-201ENST00000518699 DDX60Q8IY21 1712 aaKnown RBP29.05■■■□□ 2.24
NKX6-3-201ENST00000518699 PRR5LQ6MZQ0 368 aa29.04■■■□□ 2.24
NKX6-3-201ENST00000518699 CWC25Q9NXE8 425 aaPredicted RBP29.04■■■□□ 2.24
NKX6-3-201ENST00000518699 KIAA1551Q9HCM1 1747 aa29.04■■■□□ 2.24
NKX6-3-201ENST00000518699 TNRC6CQ9HCJ0 1690 aaKnown RBP29.04■■■□□ 2.24
NKX6-3-201ENST00000518699 CWF19L2Q2TBE0 894 aaKnown RBP29.03■■■□□ 2.24
NKX6-3-201ENST00000518699 SLC4A10Q6U841 1118 aa29.03■■■□□ 2.24
NKX6-3-201ENST00000518699 TPTE2Q6XPS3 522 aa29.03■■■□□ 2.24
NKX6-3-201ENST00000518699 UTP14AQ9BVJ6 771 aaKnown RBP29.03■■■□□ 2.24
NKX6-3-201ENST00000518699 ALDH1L1O75891 902 aa29.01■■■□□ 2.24
NKX6-3-201ENST00000518699 SRCIN1Q9C0H9 1055 aa29.01■■■□□ 2.24
NKX6-3-201ENST00000518699 ABCC12Q96J65 1359 aa29.01■■■□□ 2.23
NKX6-3-201ENST00000518699 DLEC1Q9Y238 1755 aa29.01■■■□□ 2.23
NKX6-3-201ENST00000518699 COL11A2P13942 1736 aaPredicted RBP29■■■□□ 2.23
NKX6-3-201ENST00000518699 FAM177BA6PVY3 158 aa29■■■□□ 2.23
NKX6-3-201ENST00000518699 CCT4P50991 539 aaKnown RBP29■■■□□ 2.23
NKX6-3-201ENST00000518699 ST5P78524 1137 aa29■■■□□ 2.23
NKX6-3-201ENST00000518699 GCKRQ14397 625 aa29■■■□□ 2.23
NKX6-3-201ENST00000518699 SH3TC1Q8TE82 1336 aa28.99■■■□□ 2.23
NKX6-3-201ENST00000518699 TRMT112Q9UI30 125 aaKnown RBP28.99■■■□□ 2.23
NKX6-3-201ENST00000518699 TNNQ9UQP3 1299 aa28.99■■■□□ 2.23
NKX6-3-201ENST00000518699 NPHP1O15259 732 aa28.98■■■□□ 2.23
NKX6-3-201ENST00000518699 ZBTB38Q8NAP3 1195 aaPredicted RBP28.98■■■□□ 2.23
NKX6-3-201ENST00000518699 MYH3P11055 1940 aa28.98■■■□□ 2.23
NKX6-3-201ENST00000518699 PCCAP05165 728 aaPredicted RBP28.97■■■□□ 2.23
NKX6-3-201ENST00000518699 INTS3Q68E01 1043 aaKnown RBP28.97■■■□□ 2.23
NKX6-3-201ENST00000518699 NUTM1Q86Y26 1132 aa28.97■■■□□ 2.23
NKX6-3-201ENST00000518699 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.97■■■□□ 2.23
NKX6-3-201ENST00000518699 PPP1R1BQ9UD71 204 aaPredicted RBP28.97■■■□□ 2.23
NKX6-3-201ENST00000518699 CD2APQ9Y5K6 639 aa28.97■■■□□ 2.23
NKX6-3-201ENST00000518699 ERFEQ4G0M1 354 aa28.96■■■□□ 2.23
NKX6-3-201ENST00000518699 GTF2E1P29083 439 aaPredicted RBP28.95■■■□□ 2.22
NKX6-3-201ENST00000518699 DZIP1LQ8IYY4 767 aaKnown RBP28.95■■■□□ 2.22
NKX6-3-201ENST00000518699 CLUAP1Q96AJ1 413 aa28.95■■■□□ 2.22
NKX6-3-201ENST00000518699 BRIP1Q9BX63 1249 aa28.95■■■□□ 2.22
NKX6-3-201ENST00000518699 CDHR2Q9BYE9 1310 aa28.95■■■□□ 2.22
NKX6-3-201ENST00000518699 MS4A1P11836 297 aa28.94■■■□□ 2.22
NKX6-3-201ENST00000518699 SLC10A5Q5PT55 438 aa28.94■■■□□ 2.22
NKX6-3-201ENST00000518699 FTSJ3Q8IY81 847 aaKnown RBP28.94■■■□□ 2.22
NKX6-3-201ENST00000518699 FAM89AQ96GI7 184 aa28.94■■■□□ 2.22
NKX6-3-201ENST00000518699 BRCA1P38398 1863 aaKnown RBP28.94■■■□□ 2.22
NKX6-3-201ENST00000518699 H7C1W4 665 aa28.93■■■□□ 2.22
NKX6-3-201ENST00000518699 GRM8O00222 908 aa28.92■■■□□ 2.22
NKX6-3-201ENST00000518699 CASP7P55210 303 aa28.92■■■□□ 2.22
NKX6-3-201ENST00000518699 RRP1P56182 461 aaKnown RBP28.92■■■□□ 2.22
NKX6-3-201ENST00000518699 CCDC24Q8N4L8 307 aa28.92■■■□□ 2.22
NKX6-3-201ENST00000518699 UTYO14607 1347 aa28.92■■■□□ 2.22
NKX6-3-201ENST00000518699 PLIN1O60240 522 aa28.91■■■□□ 2.22
NKX6-3-201ENST00000518699 RLBP1P12271 317 aa28.91■■■□□ 2.22
NKX6-3-201ENST00000518699 FHDC1Q9C0D6 1143 aaPredicted RBP28.91■■■□□ 2.22
NKX6-3-201ENST00000518699 UBE3BQ7Z3V4 1068 aa28.9■■■□□ 2.22
NKX6-3-201ENST00000518699 SYNE4Q8N205 404 aa28.9■■■□□ 2.22
NKX6-3-201ENST00000518699 TMEM57Q8N5G2 664 aa28.9■■■□□ 2.22
NKX6-3-201ENST00000518699 HSP90B1P14625 803 aaKnown RBP28.89■■■□□ 2.22
NKX6-3-201ENST00000518699 PDE6BP35913 854 aa28.89■■■□□ 2.22
NKX6-3-201ENST00000518699 KLRG2A4D1S0 409 aaPredicted RBP28.88■■■□□ 2.21
NKX6-3-201ENST00000518699 IRS4O14654 1257 aaPredicted RBP28.88■■■□□ 2.21
NKX6-3-201ENST00000518699 TGFB2P61812 414 aa28.88■■■□□ 2.21
NKX6-3-201ENST00000518699 PDE3AQ14432 1141 aa28.88■■■□□ 2.21
NKX6-3-201ENST00000518699 RTL5Q5HYW3 569 aaPredicted RBP28.88■■■□□ 2.21
NKX6-3-201ENST00000518699 C9orf78Q9NZ63 289 aaPredicted RBP28.88■■■□□ 2.21
NKX6-3-201ENST00000518699 PDZRN3Q9UPQ7 1066 aa28.88■■■□□ 2.21
NKX6-3-201ENST00000518699 KLHL34Q8N239 644 aa28.88■■■□□ 2.21
NKX6-3-201ENST00000518699 CRY2Q49AN0 593 aa28.87■■■□□ 2.21
NKX6-3-201ENST00000518699 PANK1Q8TE04 598 aa28.87■■■□□ 2.21
NKX6-3-201ENST00000518699 USP44Q9H0E7 712 aa28.87■■■□□ 2.21
NKX6-3-201ENST00000518699 HCLS1P14317 486 aaPredicted RBP28.86■■■□□ 2.21
NKX6-3-201ENST00000518699 JARID2Q92833 1246 aaPredicted RBP28.86■■■□□ 2.21
NKX6-3-201ENST00000518699 PLA2G12BQ9BX93 195 aa28.86■■■□□ 2.21
NKX6-3-201ENST00000518699 PDE8AO60658 829 aa28.85■■■□□ 2.21
NKX6-3-201ENST00000518699 NBPF7P0C2Y1 421 aaPredicted RBP28.85■■■□□ 2.21
NKX6-3-201ENST00000518699 NLRP3Q96P20 1036 aa28.85■■■□□ 2.21
NKX6-3-201ENST00000518699 SYT17Q9BSW7 474 aa28.85■■■□□ 2.21
NKX6-3-201ENST00000518699 C3orf67Q6ZVT6 689 aa28.84■■■□□ 2.21
NKX6-3-201ENST00000518699 SRCAPQ6ZRS2 3230 aa28.83■■■□□ 2.21
NKX6-3-201ENST00000518699 C2CD5Q86YS7 1000 aa28.83■■■□□ 2.21
NKX6-3-201ENST00000518699 ITPRIPQ8IWB1 547 aa28.83■■■□□ 2.21
NKX6-3-201ENST00000518699 NLGN2Q8NFZ4 835 aa28.83■■■□□ 2.21
NKX6-3-201ENST00000518699 CACNA1SQ13698 1873 aa28.83■■■□□ 2.21
NKX6-3-201ENST00000518699 SRGNP10124 158 aa28.82■■■□□ 2.2
NKX6-3-201ENST00000518699 C20orf194Q5TEA3 1177 aa28.82■■■□□ 2.2
NKX6-3-201ENST00000518699 MEIS3Q99687 375 aa28.82■■■□□ 2.2
NKX6-3-201ENST00000518699 H0YIN7 160 aa28.81■■■□□ 2.2
NKX6-3-201ENST00000518699 MVPQ14764 893 aaKnown RBP28.81■■■□□ 2.2
NKX6-3-201ENST00000518699 SF3B3Q15393 1217 aaKnown RBP28.81■■■□□ 2.2
NKX6-3-201ENST00000518699 DPEP1P16444 411 aa28.8■■■□□ 2.2
NKX6-3-201ENST00000518699 CHRNA5P30532 468 aa28.8■■■□□ 2.2
NKX6-3-201ENST00000518699 CTSWP56202 376 aa28.8■■■□□ 2.2
NKX6-3-201ENST00000518699 GNAI3P08754 354 aa28.79■■■□□ 2.2
NKX6-3-201ENST00000518699 UBTFL1P0CB47 393 aaPredicted RBP28.79■■■□□ 2.2
NKX6-3-201ENST00000518699 RTL9Q8NET4 1388 aa28.79■■■□□ 2.2
NKX6-3-201ENST00000518699 ARFGEF1Q9Y6D6 1849 aa28.78■■■□□ 2.2
NKX6-3-201ENST00000518699 NPR1P16066 1061 aa28.78■■■□□ 2.2
NKX6-3-201ENST00000518699 KCNA3P22001 575 aa28.78■■■□□ 2.2
NKX6-3-201ENST00000518699 HOXA10P31260 410 aaPredicted RBP28.78■■■□□ 2.2
NKX6-3-201ENST00000518699 STYK1Q6J9G0 422 aa28.78■■■□□ 2.2
NKX6-3-201ENST00000518699 MASTLQ96GX5 879 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms