RNA–Protein interactions for RNA: ENST00000518038.1

VPS37A-203, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-203ENST00000518038 UTP14AQ9BVJ6 771 aaKnown RBP23.37■■□□□ 1.33
VPS37A-203ENST00000518038 IBTKQ9P2D0 1353 aaPredicted RBP23.37■■□□□ 1.33
VPS37A-203ENST00000518038 CACNA1SQ13698 1873 aa23.36■■□□□ 1.33
VPS37A-203ENST00000518038 CCDC88AQ3V6T2 1871 aa23.36■■□□□ 1.33
VPS37A-203ENST00000518038 DDNO94850 711 aaPredicted RBP23.36■■□□□ 1.33
VPS37A-203ENST00000518038 HOXA10P31260 410 aaPredicted RBP23.36■■□□□ 1.33
VPS37A-203ENST00000518038 FKBP4Q02790 459 aaKnown RBP eCLIP23.36■■□□□ 1.33
VPS37A-203ENST00000518038 HTRA3P83110 453 aa23.35■■□□□ 1.33
VPS37A-203ENST00000518038 TCIRG1Q13488 830 aa23.35■■□□□ 1.33
VPS37A-203ENST00000518038 NLRP10Q86W26 655 aa23.35■■□□□ 1.33
VPS37A-203ENST00000518038 RPGRQ92834 1020 aaKnown RBP23.35■■□□□ 1.33
VPS37A-203ENST00000518038 TIAM2Q8IVF5 1701 aa23.34■■□□□ 1.33
VPS37A-203ENST00000518038 ELL2O00472 640 aaPredicted RBP23.34■■□□□ 1.33
VPS37A-203ENST00000518038 TCERG1O14776 1098 aaKnown RBP23.34■■□□□ 1.33
VPS37A-203ENST00000518038 APLP1P51693 650 aa23.34■■□□□ 1.33
VPS37A-203ENST00000518038 FSTL1Q12841 308 aa23.34■■□□□ 1.33
VPS37A-203ENST00000518038 SLC10A5Q5PT55 438 aa23.34■■□□□ 1.33
VPS37A-203ENST00000518038 RTKN2Q8IZC4 609 aa23.34■■□□□ 1.33
VPS37A-203ENST00000518038 ARFGEF2Q9Y6D5 1785 aa23.34■■□□□ 1.33
VPS37A-203ENST00000518038 ZNF316A6NFI3 1004 aaPredicted RBP23.33■■□□□ 1.33
VPS37A-203ENST00000518038 HOXB7P09629 217 aa23.32■■□□□ 1.32
VPS37A-203ENST00000518038 DNAJC5GQ8N7S2 189 aa23.32■■□□□ 1.32
VPS37A-203ENST00000518038 RBM17Q96I25 401 aaKnown RBP23.32■■□□□ 1.32
VPS37A-203ENST00000518038 NLRP3Q96P20 1036 aa23.32■■□□□ 1.32
VPS37A-203ENST00000518038 CRAMP1Q96RY5 1269 aa23.32■■□□□ 1.32
VPS37A-203ENST00000518038 IFT57Q9NWB7 429 aa23.32■■□□□ 1.32
VPS37A-203ENST00000518038 DBF4Q9UBU7 674 aaPredicted RBP23.32■■□□□ 1.32
VPS37A-203ENST00000518038 RIC1Q4ADV7 1423 aa23.32■■□□□ 1.32
VPS37A-203ENST00000518038 HCLS1P14317 486 aaPredicted RBP23.31■■□□□ 1.32
VPS37A-203ENST00000518038 HSP90AB3PQ58FF7 597 aa23.31■■□□□ 1.32
VPS37A-203ENST00000518038 ANKRD13DQ6ZTN6 518 aa23.31■■□□□ 1.32
VPS37A-203ENST00000518038 C8orf58Q8NAV2 365 aa23.31■■□□□ 1.32
VPS37A-203ENST00000518038 SMC1BQ8NDV3 1235 aa23.31■■□□□ 1.32
VPS37A-203ENST00000518038 SNED1Q8TER0 1413 aa23.31■■□□□ 1.32
VPS37A-203ENST00000518038 GNAI1P63096 354 aa23.3■■□□□ 1.32
VPS37A-203ENST00000518038 PLBD2Q8NHP8 589 aa23.3■■□□□ 1.32
VPS37A-203ENST00000518038 CEP350Q5VT06 3117 aa23.3■■□□□ 1.32
VPS37A-203ENST00000518038 ZNF541Q9H0D2 1346 aa23.3■■□□□ 1.32
VPS37A-203ENST00000518038 ATP5J2-PTCD1G3V325 749 aa23.29■■□□□ 1.32
VPS37A-203ENST00000518038 IARSP41252 1262 aaKnown RBP23.29■■□□□ 1.32
VPS37A-203ENST00000518038 TRMT112Q9UI30 125 aaKnown RBP23.29■■□□□ 1.32
VPS37A-203ENST00000518038 PPEF1O14829 653 aaPredicted RBP23.28■■□□□ 1.32
VPS37A-203ENST00000518038 PHAXQ9H814 394 aaKnown RBP23.28■■□□□ 1.32
VPS37A-203ENST00000518038 HYPKQ9NX55 129 aa23.28■■□□□ 1.32
VPS37A-203ENST00000518038 POTEIP0CG38 1075 aa23.27■■□□□ 1.32
VPS37A-203ENST00000518038 POTEJP0CG39 1038 aa23.27■■□□□ 1.32
VPS37A-203ENST00000518038 CALD1Q05682 793 aaKnown RBP23.27■■□□□ 1.32
VPS37A-203ENST00000518038 PSMD1Q99460 953 aa23.27■■□□□ 1.32
VPS37A-203ENST00000518038 ISCA1Q9BUE6 129 aa23.27■■□□□ 1.32
VPS37A-203ENST00000518038 DICER1Q9UPY3 1922 aaKnown RBP23.26■■□□□ 1.31
VPS37A-203ENST00000518038 WDR90Q96KV7 1748 aa23.26■■□□□ 1.31
VPS37A-203ENST00000518038 CC2D2BQ6DHV5 1058 aa23.26■■□□□ 1.31
VPS37A-203ENST00000518038 TSPYL6Q8N831 410 aa23.26■■□□□ 1.31
VPS37A-203ENST00000518038 ABCC4O15439 1325 aa23.25■■□□□ 1.31
VPS37A-203ENST00000518038 SH3TC1Q8TE82 1336 aa23.25■■□□□ 1.31
VPS37A-203ENST00000518038 FZD9O00144 591 aa23.24■■□□□ 1.31
VPS37A-203ENST00000518038 TSR2Q969E8 191 aaKnown RBP23.24■■□□□ 1.31
VPS37A-203ENST00000518038 FAM89AQ96GI7 184 aa23.24■■□□□ 1.31
VPS37A-203ENST00000518038 MRS2Q9HD23 443 aa23.24■■□□□ 1.31
VPS37A-203ENST00000518038 COL4A5P29400 1685 aa23.23■■□□□ 1.31
VPS37A-203ENST00000518038 RTL5Q5HYW3 569 aaPredicted RBP23.23■■□□□ 1.31
VPS37A-203ENST00000518038 WWC1Q8IX03 1113 aa23.23■■□□□ 1.31
VPS37A-203ENST00000518038 ATP6V0A2Q9Y487 856 aa23.23■■□□□ 1.31
VPS37A-203ENST00000518038 RNF123Q5XPI4 1314 aa23.23■■□□□ 1.31
VPS37A-203ENST00000518038 ANP32CO43423 234 aa23.22■■□□□ 1.31
VPS37A-203ENST00000518038 L3MBTL3Q96JM7 780 aaPredicted RBP23.22■■□□□ 1.31
VPS37A-203ENST00000518038 RIC3Q7Z5B4 369 aa23.21■■□□□ 1.31
VPS37A-203ENST00000518038 TAF1DQ9H5J8 278 aaPredicted RBP23.21■■□□□ 1.31
VPS37A-203ENST00000518038 JDP2Q8WYK2 163 aa23.2■■□□□ 1.3
VPS37A-203ENST00000518038 BBOX1O75936 387 aa23.19■■□□□ 1.3
VPS37A-203ENST00000518038 CCDC27Q2M243 656 aa23.19■■□□□ 1.3
VPS37A-203ENST00000518038 DDX46Q7L014 1031 aaKnown RBP23.19■■□□□ 1.3
VPS37A-203ENST00000518038 LARGE2Q8N3Y3 721 aa23.19■■□□□ 1.3
VPS37A-203ENST00000518038 SALL2Q9Y467 1007 aaPredicted RBP23.19■■□□□ 1.3
VPS37A-203ENST00000518038 ANKRD36CQ5JPF3 1778 aa23.19■■□□□ 1.3
VPS37A-203ENST00000518038 TRIM28Q13263 835 aaKnown RBP23.18■■□□□ 1.3
VPS37A-203ENST00000518038 GRIPAP1Q4V328 841 aa23.18■■□□□ 1.3
VPS37A-203ENST00000518038 CHADLQ6NUI6 762 aa23.18■■□□□ 1.3
VPS37A-203ENST00000518038 SP8Q8IXZ3 490 aa23.18■■□□□ 1.3
VPS37A-203ENST00000518038 IQCA1LA6NCM1 817 aa23.17■■□□□ 1.3
VPS37A-203ENST00000518038 GOLGA2Q08379 1002 aa23.17■■□□□ 1.3
VPS37A-203ENST00000518038 GRAPQ13588 217 aa23.17■■□□□ 1.3
VPS37A-203ENST00000518038 AOC3Q16853 763 aa23.17■■□□□ 1.3
VPS37A-203ENST00000518038 GRAPLQ8TC17 118 aaPredicted RBP23.17■■□□□ 1.3
VPS37A-203ENST00000518038 JARID2Q92833 1246 aaPredicted RBP23.17■■□□□ 1.3
VPS37A-203ENST00000518038 KLRG1Q96E93 195 aa23.17■■□□□ 1.3
VPS37A-203ENST00000518038 MYD88Q99836 296 aa23.17■■□□□ 1.3
VPS37A-203ENST00000518038 GJA3Q9Y6H8 435 aa23.17■■□□□ 1.3
VPS37A-203ENST00000518038 CCDC30Q5VVM6 783 aa23.16■■□□□ 1.3
VPS37A-203ENST00000518038 GPC2Q8N158 579 aa23.16■■□□□ 1.3
VPS37A-203ENST00000518038 HACL1Q9UJ83 578 aa23.16■■□□□ 1.3
VPS37A-203ENST00000518038 IRS4O14654 1257 aaPredicted RBP23.15■■□□□ 1.3
VPS37A-203ENST00000518038 PPIP5K2O43314 1243 aa23.15■■□□□ 1.3
VPS37A-203ENST00000518038 EIF6P56537 245 aaKnown RBP23.15■■□□□ 1.3
VPS37A-203ENST00000518038 SF3B3Q15393 1217 aaKnown RBP23.15■■□□□ 1.3
VPS37A-203ENST00000518038 EAPPQ56P03 285 aaPredicted RBP23.15■■□□□ 1.3
VPS37A-203ENST00000518038 CELF1Q92879 486 aaKnown RBP23.15■■□□□ 1.3
VPS37A-203ENST00000518038 RTFDC1Q9BY42 306 aaPredicted RBP23.15■■□□□ 1.3
VPS37A-203ENST00000518038 TMX4Q9H1E5 349 aaPredicted RBP23.15■■□□□ 1.3
VPS37A-203ENST00000518038 EPHX2P34913 555 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms