RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 BABAM1Q9NWV8 329 aa13.89□□□□□ -0.19
PDGFRB-203ENST00000517660 ZNF652Q9Y2D9 606 aa13.89□□□□□ -0.19
PDGFRB-203ENST00000517660 PDE6BP35913 854 aa13.88□□□□□ -0.19
PDGFRB-203ENST00000517660 RUNDC1Q96C34 613 aa13.88□□□□□ -0.19
PDGFRB-203ENST00000517660 BEGAINQ9BUH8 593 aa13.88□□□□□ -0.19
PDGFRB-203ENST00000517660 TSPYL4Q9UJ04 414 aa13.88□□□□□ -0.19
PDGFRB-203ENST00000517660 ARFGEF2Q9Y6D5 1785 aa13.87□□□□□ -0.19
PDGFRB-203ENST00000517660 ECE1P42892 770 aa13.87□□□□□ -0.19
PDGFRB-203ENST00000517660 CCDC146Q8IYE0 955 aa13.87□□□□□ -0.19
PDGFRB-203ENST00000517660 ADAMTS8Q9UP79 889 aa13.87□□□□□ -0.19
PDGFRB-203ENST00000517660 TLL2Q9Y6L7 1015 aa13.87□□□□□ -0.19
PDGFRB-203ENST00000517660 COL4A5P29400 1685 aa13.86□□□□□ -0.19
PDGFRB-203ENST00000517660 CASP8AP2Q9UKL3 1982 aa13.86□□□□□ -0.19
PDGFRB-203ENST00000517660 TRAF5O00463 557 aa13.86□□□□□ -0.19
PDGFRB-203ENST00000517660 NPHP1O15259 732 aa13.86□□□□□ -0.19
PDGFRB-203ENST00000517660 SRGNP10124 158 aa13.86□□□□□ -0.19
PDGFRB-203ENST00000517660 MAP2K2P36507 400 aa13.86□□□□□ -0.19
PDGFRB-203ENST00000517660 OLFM4Q6UX06 510 aa13.86□□□□□ -0.19
PDGFRB-203ENST00000517660 PAXIP1Q6ZW49 1069 aaPredicted RBP13.86□□□□□ -0.19
PDGFRB-203ENST00000517660 PNMA8AQ86V59 439 aaPredicted RBP13.86□□□□□ -0.19
PDGFRB-203ENST00000517660 CNBD1Q8NA66 436 aa13.86□□□□□ -0.19
PDGFRB-203ENST00000517660 ZNF277Q9NRM2 450 aaPredicted RBP13.86□□□□□ -0.19
PDGFRB-203ENST00000517660 RRP7AQ9Y3A4 280 aaKnown RBP13.86□□□□□ -0.19
PDGFRB-203ENST00000517660 CACNA1SQ13698 1873 aa13.85□□□□□ -0.19
PDGFRB-203ENST00000517660 FZD9O00144 591 aa13.85□□□□□ -0.19
PDGFRB-203ENST00000517660 ST5P78524 1137 aa13.85□□□□□ -0.19
PDGFRB-203ENST00000517660 NEUROD2Q15784 382 aa13.85□□□□□ -0.19
PDGFRB-203ENST00000517660 STYK1Q6J9G0 422 aa13.85□□□□□ -0.19
PDGFRB-203ENST00000517660 NBPF5PQ86XG9 351 aaPredicted RBP13.85□□□□□ -0.19
PDGFRB-203ENST00000517660 NGEFQ8N5V2 710 aa13.85□□□□□ -0.19
PDGFRB-203ENST00000517660 NIP7Q9Y221 180 aaKnown RBP eCLIP13.85□□□□□ -0.19
PDGFRB-203ENST00000517660 SCN7AQ01118 1682 aa13.85□□□□□ -0.19
PDGFRB-203ENST00000517660 ERVV-1B6SEH8 477 aa13.84□□□□□ -0.19
PDGFRB-203ENST00000517660 TPTE2Q6XPS3 522 aa13.84□□□□□ -0.19
PDGFRB-203ENST00000517660 CNKSR1Q969H4 720 aa13.84□□□□□ -0.19
PDGFRB-203ENST00000517660 ERBB4Q15303 1308 aa13.84□□□□□ -0.19
PDGFRB-203ENST00000517660 SNED1Q8TER0 1413 aa13.83□□□□□ -0.2
PDGFRB-203ENST00000517660 CA12O43570 354 aa13.83□□□□□ -0.2
PDGFRB-203ENST00000517660 FKBP4Q02790 459 aaKnown RBP eCLIP13.83□□□□□ -0.2
PDGFRB-203ENST00000517660 HLFQ16534 295 aa13.83□□□□□ -0.2
PDGFRB-203ENST00000517660 ZIC5Q96T25 663 aa13.83□□□□□ -0.2
PDGFRB-203ENST00000517660 TRIM35Q9UPQ4 493 aa13.83□□□□□ -0.2
PDGFRB-203ENST00000517660 CHL1O00533 1208 aa13.82□□□□□ -0.2
PDGFRB-203ENST00000517660 MYL6BP14649 208 aa13.82□□□□□ -0.2
PDGFRB-203ENST00000517660 EIF2S2P20042 333 aaKnown RBP13.82□□□□□ -0.2
PDGFRB-203ENST00000517660 BRPF1P55201 1214 aaPredicted RBP13.82□□□□□ -0.2
PDGFRB-203ENST00000517660 KIF6Q6ZMV9 814 aa13.82□□□□□ -0.2
PDGFRB-203ENST00000517660 SAPCD2Q86UD0 394 aa13.82□□□□□ -0.2
PDGFRB-203ENST00000517660 MAP3K15Q6ZN16 1313 aa13.82□□□□□ -0.2
PDGFRB-203ENST00000517660 SCNN1DP51172 638 aa13.81□□□□□ -0.2
PDGFRB-203ENST00000517660 CCDC93Q567U6 631 aa13.81□□□□□ -0.2
PDGFRB-203ENST00000517660 SOGA3Q5TF21 947 aa13.81□□□□□ -0.2
PDGFRB-203ENST00000517660 CIAPIN1Q6FI81 312 aa13.81□□□□□ -0.2
PDGFRB-203ENST00000517660 TTLL7Q6ZT98 887 aa13.81□□□□□ -0.2
PDGFRB-203ENST00000517660 GPC2Q8N158 579 aa13.81□□□□□ -0.2
PDGFRB-203ENST00000517660 MASTLQ96GX5 879 aa13.81□□□□□ -0.2
PDGFRB-203ENST00000517660 KLRG2A4D1S0 409 aaPredicted RBP13.8□□□□□ -0.2
PDGFRB-203ENST00000517660 FAM177BA6PVY3 158 aa13.8□□□□□ -0.2
PDGFRB-203ENST00000517660 GTF2E1P29083 439 aaPredicted RBP13.8□□□□□ -0.2
PDGFRB-203ENST00000517660 EPS15P42566 896 aa13.8□□□□□ -0.2
PDGFRB-203ENST00000517660 LAS1LQ9Y4W2 734 aaKnown RBP13.8□□□□□ -0.2
PDGFRB-203ENST00000517660 BCORQ6W2J9 1755 aa13.8□□□□□ -0.2
PDGFRB-203ENST00000517660 TRPM7Q96QT4 1865 aa13.79□□□□□ -0.2
PDGFRB-203ENST00000517660 PDIA6Q15084 440 aa13.79□□□□□ -0.2
PDGFRB-203ENST00000517660 NYXQ9GZU5 481 aa13.79□□□□□ -0.2
PDGFRB-203ENST00000517660 ZBTB3Q9H5J0 574 aa13.79□□□□□ -0.2
PDGFRB-203ENST00000517660 ZNF316A6NFI3 1004 aaPredicted RBP13.78□□□□□ -0.2
PDGFRB-203ENST00000517660 NPR1P16066 1061 aa13.78□□□□□ -0.2
PDGFRB-203ENST00000517660 IARSP41252 1262 aaKnown RBP13.78□□□□□ -0.2
PDGFRB-203ENST00000517660 GIGYF2Q6Y7W6 1299 aaKnown RBP13.78□□□□□ -0.2
PDGFRB-203ENST00000517660 LRP10Q7Z4F1 713 aa13.78□□□□□ -0.2
PDGFRB-203ENST00000517660 MKI67P46013 3256 aaKnown RBP13.78□□□□□ -0.2
PDGFRB-203ENST00000517660 APAF1O14727 1248 aa13.77□□□□□ -0.21
PDGFRB-203ENST00000517660 ZNF34Q8IZ26 560 aa13.77□□□□□ -0.21
PDGFRB-203ENST00000517660 HHIPL1Q96JK4 782 aa13.77□□□□□ -0.21
PDGFRB-203ENST00000517660 DLG5Q8TDM6 1919 aa13.76□□□□□ -0.21
PDGFRB-203ENST00000517660 GPTP24298 496 aa13.76□□□□□ -0.21
PDGFRB-203ENST00000517660 PROSER3Q2NL68 480 aa13.76□□□□□ -0.21
PDGFRB-203ENST00000517660 SLC51AQ86UW1 340 aa13.76□□□□□ -0.21
PDGFRB-203ENST00000517660 SYNE4Q8N205 404 aa13.76□□□□□ -0.21
PDGFRB-203ENST00000517660 NECTIN2Q92692 538 aa13.76□□□□□ -0.21
PDGFRB-203ENST00000517660 KDM3BQ7LBC6 1761 aa13.76□□□□□ -0.21
PDGFRB-203ENST00000517660 ANXA1P04083 346 aa13.75□□□□□ -0.21
PDGFRB-203ENST00000517660 HOXB7P09629 217 aa13.75□□□□□ -0.21
PDGFRB-203ENST00000517660 ALDH1B1P30837 517 aa13.75□□□□□ -0.21
PDGFRB-203ENST00000517660 CALD1Q05682 793 aaKnown RBP13.75□□□□□ -0.21
PDGFRB-203ENST00000517660 KRT24Q2M2I5 525 aa13.75□□□□□ -0.21
PDGFRB-203ENST00000517660 PARP10Q53GL7 1025 aa13.75□□□□□ -0.21
PDGFRB-203ENST00000517660 SUSD4Q5VX71 490 aa13.75□□□□□ -0.21
PDGFRB-203ENST00000517660 COPS6Q7L5N1 327 aa13.75□□□□□ -0.21
PDGFRB-203ENST00000517660 NUTM1Q86Y26 1132 aa13.75□□□□□ -0.21
PDGFRB-203ENST00000517660 GJA3Q9Y6H8 435 aa13.75□□□□□ -0.21
PDGFRB-203ENST00000517660 CELF2O95319 508 aaKnown RBP13.74□□□□□ -0.21
PDGFRB-203ENST00000517660 ZNF853P0CG23 659 aa13.74□□□□□ -0.21
PDGFRB-203ENST00000517660 AIMP1Q12904 312 aaKnown RBP13.74□□□□□ -0.21
PDGFRB-203ENST00000517660 HABP4Q5JVS0 413 aaKnown RBP13.74□□□□□ -0.21
PDGFRB-203ENST00000517660 PPP1R42Q7Z4L9 355 aa13.74□□□□□ -0.21
PDGFRB-203ENST00000517660 XAGE3Q8WTP9 111 aa13.74□□□□□ -0.21
PDGFRB-203ENST00000517660 UBN2Q6ZU65 1347 aa13.73□□□□□ -0.21
PDGFRB-203ENST00000517660 GNAI1P63096 354 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms