RNA–Protein interactions for RNA: ENST00000517624.1

VIRMA-203, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 497 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-203ENST00000517624 TXNRD1Q16881 649 aa11.68□□□□□ -0.54
VIRMA-203ENST00000517624 SLC27A3Q5K4L6 730 aa11.68□□□□□ -0.54
VIRMA-203ENST00000517624 POTEBQ6S5H4 581 aa11.68□□□□□ -0.54
VIRMA-203ENST00000517624 RPAP2Q8IXW5 612 aaPredicted RBP11.68□□□□□ -0.54
VIRMA-203ENST00000517624 NECTIN2Q92692 538 aa11.68□□□□□ -0.54
VIRMA-203ENST00000517624 C22orf23Q9BZE7 217 aa11.68□□□□□ -0.54
VIRMA-203ENST00000517624 LRRC4BQ9NT99 713 aa11.68□□□□□ -0.54
VIRMA-203ENST00000517624 CCNL1Q9UK58 526 aaPredicted RBP11.68□□□□□ -0.54
VIRMA-203ENST00000517624 LAMB4A4D0S4 1761 aa11.68□□□□□ -0.54
VIRMA-203ENST00000517624 PXDNLA1KZ92 1463 aa11.68□□□□□ -0.54
VIRMA-203ENST00000517624 RGPD3A6NKT7 1758 aaPredicted RBP11.67□□□□□ -0.54
VIRMA-203ENST00000517624 RGPD4Q7Z3J3 1758 aa11.67□□□□□ -0.54
VIRMA-203ENST00000517624 KCNQ4P56696 695 aa11.67□□□□□ -0.54
VIRMA-203ENST00000517624 LRP10Q7Z4F1 713 aa11.67□□□□□ -0.54
VIRMA-203ENST00000517624 ANKRD44Q8N8A2 993 aa11.67□□□□□ -0.54
VIRMA-203ENST00000517624 LINC00116Q8NCU8 138 aa11.67□□□□□ -0.54
VIRMA-203ENST00000517624 CAMKK2Q96RR4 588 aa11.67□□□□□ -0.54
VIRMA-203ENST00000517624 LNPKQ9C0E8 428 aa11.67□□□□□ -0.54
VIRMA-203ENST00000517624 DDX21Q9NR30 783 aaKnown RBP eCLIP11.67□□□□□ -0.54
VIRMA-203ENST00000517624 DBF4Q9UBU7 674 aaPredicted RBP11.67□□□□□ -0.54
VIRMA-203ENST00000517624 CACNA1FO60840 1977 aa11.67□□□□□ -0.54
VIRMA-203ENST00000517624 NBPF26B4DH59 902 aa11.66□□□□□ -0.54
VIRMA-203ENST00000517624 A1BGP04217 495 aa11.66□□□□□ -0.54
VIRMA-203ENST00000517624 RBM25P49756 843 aaKnown RBP11.66□□□□□ -0.54
VIRMA-203ENST00000517624 SF3B2Q13435 895 aaKnown RBP11.66□□□□□ -0.54
VIRMA-203ENST00000517624 PROSER3Q2NL68 480 aa11.66□□□□□ -0.54
VIRMA-203ENST00000517624 RC3H1Q5TC82 1133 aaKnown RBP11.66□□□□□ -0.54
VIRMA-203ENST00000517624 NBPF14Q5TI25 921 aa11.66□□□□□ -0.54
VIRMA-203ENST00000517624 NBPF10Q6P3W6 841 aaKnown RBP11.66□□□□□ -0.54
VIRMA-203ENST00000517624 INTS5Q6P9B9 1019 aaKnown RBP11.66□□□□□ -0.54
VIRMA-203ENST00000517624 ILDR2Q71H61 639 aa11.66□□□□□ -0.54
VIRMA-203ENST00000517624 NBPF15Q8N660 670 aa11.66□□□□□ -0.54
VIRMA-203ENST00000517624 STK31Q9BXU1 1019 aa11.66□□□□□ -0.54
VIRMA-203ENST00000517624 KRTAP3-3Q9BYR6 98 aa11.66□□□□□ -0.54
VIRMA-203ENST00000517624 KRTAP3-2Q9BYR7 98 aa11.66□□□□□ -0.54
VIRMA-203ENST00000517624 CHPF2Q9P2E5 772 aa11.66□□□□□ -0.54
VIRMA-203ENST00000517624 COL5A3P25940 1745 aaPredicted RBP11.66□□□□□ -0.54
VIRMA-203ENST00000517624 CNTNAP4Q9C0A0 1308 aa11.65□□□□□ -0.54
VIRMA-203ENST00000517624 MYH14Q7Z406 1995 aaKnown RBP11.65□□□□□ -0.54
VIRMA-203ENST00000517624 HMGB2P26583 209 aaKnown RBP11.65□□□□□ -0.54
VIRMA-203ENST00000517624 CRKLP46109 303 aaKnown RBP11.65□□□□□ -0.54
VIRMA-203ENST00000517624 BAG6P46379 1132 aa11.65□□□□□ -0.54
VIRMA-203ENST00000517624 CCT4P50991 539 aaKnown RBP11.65□□□□□ -0.54
VIRMA-203ENST00000517624 MFAP1P55081 439 aaKnown RBP11.65□□□□□ -0.54
VIRMA-203ENST00000517624 EN1Q05925 392 aaPredicted RBP11.65□□□□□ -0.54
VIRMA-203ENST00000517624 ANKRD45Q5TZF3 282 aa11.65□□□□□ -0.54
VIRMA-203ENST00000517624 SIRT2Q8IXJ6 389 aa11.65□□□□□ -0.54
VIRMA-203ENST00000517624 UPF1Q92900 1129 aaKnown RBP eCLIP11.65□□□□□ -0.54
VIRMA-203ENST00000517624 DCTPP1Q9H773 170 aa11.65□□□□□ -0.54
VIRMA-203ENST00000517624 C1orf115Q9H7X2 142 aa11.65□□□□□ -0.54
VIRMA-203ENST00000517624 CCDC87Q9NVE4 849 aa11.65□□□□□ -0.54
VIRMA-203ENST00000517624 HYPKQ9NX55 129 aa11.65□□□□□ -0.54
VIRMA-203ENST00000517624 TAF1LQ8IZX4 1826 aa11.65□□□□□ -0.55
VIRMA-203ENST00000517624 ANXA1P04083 346 aa11.64□□□□□ -0.55
VIRMA-203ENST00000517624 EZH2Q15910 746 aaKnown RBP11.64□□□□□ -0.55
VIRMA-203ENST00000517624 G2E3Q7L622 706 aa11.64□□□□□ -0.55
VIRMA-203ENST00000517624 FAM212AQ96EL1 285 aa11.64□□□□□ -0.55
VIRMA-203ENST00000517624 TBC1D2Q9BYX2 928 aa11.64□□□□□ -0.55
VIRMA-203ENST00000517624 ZBTB1Q9Y2K1 713 aa11.64□□□□□ -0.55
VIRMA-203ENST00000517624 RREB1Q92766 1687 aa11.64□□□□□ -0.55
VIRMA-203ENST00000517624 HMMRO75330 724 aa11.63□□□□□ -0.55
VIRMA-203ENST00000517624 IL6STP40189 918 aaPredicted RBP11.63□□□□□ -0.55
VIRMA-203ENST00000517624 PIP4K2AP48426 406 aaPredicted RBP11.63□□□□□ -0.55
VIRMA-203ENST00000517624 EIF5P55010 431 aaKnown RBP11.63□□□□□ -0.55
VIRMA-203ENST00000517624 CEP85Q6P2H3 762 aa11.63□□□□□ -0.55
VIRMA-203ENST00000517624 DEFB132Q7Z7B7 95 aa11.63□□□□□ -0.55
VIRMA-203ENST00000517624 CDC45O75419 566 aa11.62□□□□□ -0.55
VIRMA-203ENST00000517624 RPS6KA4O75676 772 aa11.62□□□□□ -0.55
VIRMA-203ENST00000517624 MYL6BP14649 208 aa11.62□□□□□ -0.55
VIRMA-203ENST00000517624 EMP3P54852 163 aa11.62□□□□□ -0.55
VIRMA-203ENST00000517624 FLIIQ13045 1269 aa11.62□□□□□ -0.55
VIRMA-203ENST00000517624 HSCBQ8IWL3 235 aa11.62□□□□□ -0.55
VIRMA-203ENST00000517624 SNX21Q969T3 373 aa11.62□□□□□ -0.55
VIRMA-203ENST00000517624 ANTXR1Q9H6X2 564 aa11.62□□□□□ -0.55
VIRMA-203ENST00000517624 PHAXQ9H814 394 aaKnown RBP11.62□□□□□ -0.55
VIRMA-203ENST00000517624 C4BP0C0L5 1744 aa11.62□□□□□ -0.55
VIRMA-203ENST00000517624 COPS6Q7L5N1 327 aa11.61□□□□□ -0.55
VIRMA-203ENST00000517624 XAGE3Q8WTP9 111 aa11.61□□□□□ -0.55
VIRMA-203ENST00000517624 TTLL7Q6ZT98 887 aa11.6□□□□□ -0.55
VIRMA-203ENST00000517624 PCDHB8Q9UN66 801 aa11.6□□□□□ -0.55
VIRMA-203ENST00000517624 GNPATO15228 680 aa11.59□□□□□ -0.55
VIRMA-203ENST00000517624 GNAI3P08754 354 aa11.59□□□□□ -0.55
VIRMA-203ENST00000517624 PYGBP11216 843 aa11.59□□□□□ -0.55
VIRMA-203ENST00000517624 FKBP5Q13451 457 aaPredicted RBP11.59□□□□□ -0.55
VIRMA-203ENST00000517624 GSE1Q14687 1217 aa11.59□□□□□ -0.55
VIRMA-203ENST00000517624 ZNF827Q17R98 1081 aa11.59□□□□□ -0.55
VIRMA-203ENST00000517624 TTC22Q5TAA0 569 aa11.59□□□□□ -0.55
VIRMA-203ENST00000517624 ANKRD13DQ6ZTN6 518 aa11.59□□□□□ -0.55
VIRMA-203ENST00000517624 AMIGO3Q86WK7 504 aa11.59□□□□□ -0.55
VIRMA-203ENST00000517624 PLEKHM2Q8IWE5 1019 aa11.59□□□□□ -0.55
VIRMA-203ENST00000517624 AK7Q96M32 723 aa11.59□□□□□ -0.55
VIRMA-203ENST00000517624 HS3ST6Q96QI5 342 aa11.59□□□□□ -0.55
VIRMA-203ENST00000517624 MEIS3Q99687 375 aa11.59□□□□□ -0.55
VIRMA-203ENST00000517624 RTCBQ9Y3I0 505 aaKnown RBP11.59□□□□□ -0.55
VIRMA-203ENST00000517624 COL15A1P39059 1388 aa11.58□□□□□ -0.56
VIRMA-203ENST00000517624 PI4KAP2A4QPH2 592 aa11.58□□□□□ -0.56
VIRMA-203ENST00000517624 DDX58O95786 925 aaKnown RBP11.58□□□□□ -0.56
VIRMA-203ENST00000517624 AIMP1Q12904 312 aaKnown RBP11.58□□□□□ -0.56
VIRMA-203ENST00000517624 KSR2Q6VAB6 950 aa11.58□□□□□ -0.56
VIRMA-203ENST00000517624 TBC1D9Q6ZT07 1266 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms